EnhancerDB
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  3. vista28286[chr19:3397236-3397600]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28286[chr19:3397236-3397600]
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Tissue distribution of vista28286
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Transcription factor that possibly regulate vista28286[chr19:3397236-3397600]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 3397222 3397236 NR2F1 JASPAR yes 70786962
chr19 3397222 3397236 NR2F1 JASPAR yes 112127785
chr19 3397227 3397238 ESRRA JASPAR yes 70786963
chr19 3397227 3397238 ESRRA JASPAR yes 112127786
chr19 3397227 3397240 NR2F1 JASPAR yes 70786964
chr19 3397227 3397240 NR2F1 JASPAR yes 112127787
chr19 3397229 3397237 NR4A2 JASPAR yes 70786965
chr19 3397229 3397237 NR4A2 JASPAR yes 112127788
chr19 3397275 3397285 RELA JASPAR yes 70786966
chr19 3397275 3397285 RELA JASPAR yes 112127790
chr19 3397275 3397286 NFKB1 JASPAR yes 70786967
chr19 3397275 3397286 NFKB1 JASPAR yes 112127791
chr19 3397294 3397303 HIC2 JASPAR yes 70786968
chr19 3397294 3397303 HIC2 JASPAR yes 112127792
chr19 3397297 3397301 LFA1 TRANSFAC yes 70786969
chr19 3397297 3397301 LFA1 TRANSFAC yes 112127793
chr19 3397306 3397326 RREB1 JASPAR yes 70786970
chr19 3397306 3397326 RREB1 JASPAR yes 112127794
chr19 3397332 3397342 NFKB1 JASPAR yes 70786971
chr19 3397332 3397342 NFKB1 JASPAR yes 112127795
chr19 3397338 3397353 HSF1 JASPAR yes 70786972
chr19 3397338 3397353 HSF1 JASPAR yes 112127796
chr19 3397343 3397358 HSF1 JASPAR yes 70786973
chr19 3397343 3397358 HSF1 JASPAR yes 112127797
chr19 3397344 3397357 HSF1 JASPAR yes 70786974
chr19 3397344 3397357 HSF2 JASPAR yes 70786975
chr19 3397344 3397357 HSF4 JASPAR yes 70786976
chr19 3397344 3397357 HSF1 JASPAR yes 112127798
chr19 3397344 3397357 HSF2 JASPAR yes 112127799
chr19 3397344 3397357 HSF4 JASPAR yes 112127800
chr19 3397348 3397363 HSF1 JASPAR yes 70786977
chr19 3397348 3397363 HSF1 JASPAR yes 112127801
chr19 3397359 3397371 TFAP2C JASPAR yes 70786978
chr19 3397359 3397371 TFAP2C JASPAR yes 112127802
chr19 3397367 3397380 TFAP2B JASPAR yes 70786979
chr19 3397367 3397380 TFAP2B JASPAR yes 112127803
chr19 3397420 3397436 SOX4 JASPAR yes 70786980
chr19 3397420 3397436 SOX4 JASPAR yes 112127804
chr19 3397421 3397436 TFAP2A JASPAR yes 70786981
chr19 3397421 3397436 TFAP2C JASPAR yes 70786982
chr19 3397421 3397436 TFAP2A JASPAR yes 112127805
chr19 3397421 3397436 TFAP2C JASPAR yes 112127806
chr19 3397437 3397456 REST JASPAR yes 70786983
chr19 3397437 3397456 REST JASPAR yes 112127807
chr19 3397447 3397457 SP1 JASPAR yes 70786984
chr19 3397447 3397457 SP1 JASPAR yes 112127808
chr19 3397454 3397458 LFA1 TRANSFAC yes 70786985
chr19 3397454 3397458 LFA1 TRANSFAC yes 112127809
chr19 3397478 3397483 TFAP2A TRANSFAC yes 70786986
chr19 3397478 3397483 TFAP2A TRANSFAC yes 112127810
chr19 3397478 3397484 MZF1 JASPAR yes 70786987
chr19 3397478 3397484 MZF1 JASPAR yes 112127811
chr19 3397490 3397500 TBX21 JASPAR yes 70786988
chr19 3397490 3397500 TBX21 JASPAR yes 112127812
chr19 3397490 3397501 TBX20 JASPAR yes 70786989
chr19 3397490 3397501 TBX2 JASPAR yes 70786990
chr19 3397490 3397501 TBX20 JASPAR yes 112127813
chr19 3397490 3397501 TBX2 JASPAR yes 112127814
chr19 3397490 3397503 EOMES JASPAR yes 70786991
chr19 3397490 3397503 EOMES JASPAR yes 112127815
chr19 3397491 3397499 MGA JASPAR yes 70786992
chr19 3397491 3397499 TBX15 JASPAR yes 70786993
chr19 3397491 3397499 TBX1 JASPAR yes 70786994
chr19 3397491 3397499 TBX4 JASPAR yes 70786995
chr19 3397491 3397499 TBX5 JASPAR yes 70786996
chr19 3397491 3397499 MGA JASPAR yes 112127816
chr19 3397491 3397499 TBX15 JASPAR yes 112127817
chr19 3397491 3397499 TBX1 JASPAR yes 112127818
chr19 3397491 3397499 TBX4 JASPAR yes 112127819
chr19 3397491 3397499 TBX5 JASPAR yes 112127820
chr19 3397491 3397501 TBR1 JASPAR yes 70786997
chr19 3397491 3397501 TBR1 JASPAR yes 112127821
chr19 3397515 3397533 ESR2 JASPAR yes 70786998
chr19 3397515 3397533 ESR2 JASPAR yes 112127822
chr19 3397530 3397534 NFE TRANSFAC yes 70786999
chr19 3397530 3397534 NFE TRANSFAC yes 112127823
chr19 3397536 3397540 NFE TRANSFAC yes 70787000
chr19 3397536 3397540 NFE TRANSFAC yes 112127824
chr19 3397539 3397560 ZNF263 JASPAR yes 70787001
chr19 3397539 3397560 ZNF263 JASPAR yes 112127825
chr19 3397557 3397563 MZF1 JASPAR yes 70787002
chr19 3397557 3397563 MZF1 JASPAR yes 112127826
chr19 3397582 3397586 NFE TRANSFAC yes 70787003
chr19 3397582 3397586 NFE TRANSFAC yes 112127827
chr19 3397591 3397612 ZNF263 JASPAR yes 70787004
chr19 3397591 3397612 ZNF263 JASPAR yes 112127828
chr19 3397594 3397604 SP1 JASPAR yes 70787005
chr19 3397594 3397604 SP1 JASPAR yes 112127829
SNP sites on vista28286[chr19:3397236-3397600]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 3397342 rs141381237 C G
HSF1 NFKB1
5394047
chr19 3397431 rs4806928 A G
SOX4 TFAP2A TFAP2C
5394048
chr19 3397564 rs4806929 G A no 5394049
Genes possibly regulated by vista28286[chr19:3397236-3397600]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 3359561 3469215 + NFIC ENSG00000141905.13 3359561 0.73 1.0 16805 62325
chr19 3474405 3480540 - C19orf77 ENSG00000095932.5 3480540 0.99 0.98 16806 17060
Expression level of Genes
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miRNAs possibly regulated by vista28286[chr19:3397236-3397600]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results