EnhancerDB
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  3. vista28288[chr19:3404098-3404373]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28288[chr19:3404098-3404373]
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Tissue distribution of vista28288
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Transcription factor that possibly regulate vista28288[chr19:3404098-3404373]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 3404091 3404101 MAX JASPAR yes 70787040
chr19 3404091 3404101 MAX JASPAR yes 112128712
chr19 3404091 3404106 SCRT1 JASPAR yes 70787041
chr19 3404091 3404106 SCRT1 JASPAR yes 112128713
chr19 3404093 3404106 ZBTB18 JASPAR yes 70787042
chr19 3404093 3404106 ZBTB18 JASPAR yes 112128714
chr19 3404094 3404105 USF2 JASPAR yes 70787043
chr19 3404094 3404105 USF2 JASPAR yes 112128715
chr19 3404095 3404105 MAX JASPAR yes 70787044
chr19 3404095 3404105 MAX JASPAR yes 112128716
chr19 3404108 3404119 NFKB1 JASPAR yes 70787045
chr19 3404108 3404119 NFKB1 JASPAR yes 112128717
chr19 3404112 3404127 TFAP2A JASPAR yes 70787046
chr19 3404112 3404127 TFAP2A JASPAR yes 112128718
chr19 3404113 3404126 TFAP2A JASPAR yes 70787047
chr19 3404113 3404126 TFAP2B JASPAR yes 70787048
chr19 3404113 3404126 TFAP2C JASPAR yes 70787049
chr19 3404113 3404126 TFAP2A JASPAR yes 112128719
chr19 3404113 3404126 TFAP2B JASPAR yes 112128720
chr19 3404113 3404126 TFAP2C JASPAR yes 112128721
chr19 3404114 3404126 TFAP2A JASPAR yes 70787050
chr19 3404114 3404126 TFAP2A JASPAR yes 112128722
chr19 3404116 3404125 TFAP2A JASPAR yes 70787051
chr19 3404116 3404125 TFAP2A JASPAR yes 112128723
chr19 3404123 3404141 RARA JASPAR yes 70787052
chr19 3404123 3404141 RARA JASPAR yes 112128724
chr19 3404126 3404141 NR2C2 JASPAR yes 70787053
chr19 3404126 3404141 NR2C2 JASPAR yes 112128725
chr19 3404129 3404150 ZNF263 JASPAR yes 70787054
chr19 3404129 3404150 ZNF263 JASPAR yes 112128726
chr19 3404133 3404143 SP1 JASPAR yes 70787055
chr19 3404133 3404143 ZNF740 JASPAR yes 70787056
chr19 3404133 3404143 SP1 JASPAR yes 112128727
chr19 3404133 3404143 ZNF740 JASPAR yes 112128728
chr19 3404134 3404144 SP1 JASPAR yes 70787057
chr19 3404134 3404144 ZNF740 JASPAR yes 70787058
chr19 3404134 3404144 SP1 JASPAR yes 112128729
chr19 3404134 3404144 ZNF740 JASPAR yes 112128730
chr19 3404135 3404145 SP1 JASPAR yes 70787059
chr19 3404135 3404145 ZNF740 JASPAR yes 70787060
chr19 3404135 3404145 SP1 JASPAR yes 112128731
chr19 3404135 3404145 ZNF740 JASPAR yes 112128732
chr19 3404136 3404146 ZNF740 JASPAR yes 70787061
chr19 3404136 3404146 ZNF740 JASPAR yes 112128733
chr19 3404165 3404176 STAT1 JASPAR yes 70787062
chr19 3404165 3404176 STAT3 JASPAR yes 70787063
chr19 3404165 3404176 STAT1 JASPAR yes 112128734
chr19 3404165 3404176 STAT3 JASPAR yes 112128735
chr19 3404168 3404175 ETS1 TRANSFAC yes 70787064
chr19 3404168 3404175 ETS1 TRANSFAC yes 112128736
chr19 3404169 3404177 EHF JASPAR yes 70787065
chr19 3404169 3404177 EHF JASPAR yes 112128737
chr19 3404170 3404190 RREB1 JASPAR yes 70787066
chr19 3404170 3404190 RREB1 JASPAR yes 112128738
chr19 3404171 3404191 RREB1 JASPAR yes 70787067
chr19 3404171 3404191 RREB1 JASPAR yes 112128739
chr19 3404172 3404193 ZNF263 JASPAR yes 70787068
chr19 3404172 3404193 ZNF263 JASPAR yes 112128740
chr19 3404174 3404194 RREB1 JASPAR yes 70787069
chr19 3404174 3404194 RREB1 JASPAR yes 112128741
chr19 3404176 3404196 RREB1 JASPAR yes 70787070
chr19 3404176 3404196 RREB1 JASPAR yes 112128742
chr19 3404177 3404197 RREB1 JASPAR yes 70787071
chr19 3404177 3404197 RREB1 JASPAR yes 112128743
chr19 3404179 3404189 ZNF740 JASPAR yes 70787072
chr19 3404179 3404189 ZNF740 JASPAR yes 112128744
chr19 3404179 3404199 RREB1 JASPAR yes 70787073
chr19 3404179 3404199 RREB1 JASPAR yes 112128745
chr19 3404180 3404200 RREB1 JASPAR yes 70787074
chr19 3404180 3404200 RREB1 JASPAR yes 112128746
chr19 3404181 3404191 SP1 JASPAR yes 70787075
chr19 3404181 3404191 SP1 JASPAR yes 112128747
chr19 3404181 3404202 ZNF263 JASPAR yes 70787076
chr19 3404181 3404202 ZNF263 JASPAR yes 112128748
chr19 3404182 3404202 RREB1 JASPAR yes 70787077
chr19 3404182 3404202 RREB1 JASPAR yes 112128749
chr19 3404184 3404189 SP1 TRANSFAC yes 70787078
chr19 3404184 3404189 SP1 TRANSFAC yes 112128750
chr19 3404185 3404195 ZNF740 JASPAR yes 70787079
chr19 3404185 3404195 ZNF740 JASPAR yes 112128751
chr19 3404185 3404199 PLAG1 JASPAR yes 70787080
chr19 3404185 3404199 PLAG1 JASPAR yes 112128752
chr19 3404194 3404199 TFAP2A TRANSFAC yes 70787081
chr19 3404194 3404199 TFAP2A TRANSFAC yes 112128753
chr19 3404194 3404200 MZF1 JASPAR yes 70787082
chr19 3404194 3404200 MZF1 JASPAR yes 112128754
chr19 3404211 3404226 STAT1 JASPAR yes 70787083
chr19 3404211 3404226 STAT1 JASPAR yes 112128755
chr19 3404213 3404224 STAT1 JASPAR yes 70787084
chr19 3404213 3404224 STAT3 JASPAR yes 70787085
chr19 3404213 3404224 STAT1 JASPAR yes 112128756
chr19 3404213 3404224 STAT3 JASPAR yes 112128757
chr19 3404218 3404223 ETS2 TRANSFAC yes 70787086
chr19 3404218 3404223 ETS2 TRANSFAC yes 112128758
chr19 3404238 3404253 FOXP1 JASPAR yes 70787087
chr19 3404238 3404253 FOXP1 JASPAR yes 112128759
chr19 3404239 3404250 FOXA1 JASPAR yes 70787088
chr19 3404239 3404250 FOXA1 JASPAR yes 112128760
chr19 3404239 3404254 FOXA1 JASPAR yes 70787089
chr19 3404239 3404254 FOXA1 JASPAR yes 112128761
chr19 3404240 3404251 FOXB1 JASPAR yes 70787090
chr19 3404240 3404251 FOXC1 JASPAR yes 70787091
chr19 3404240 3404251 FOXB1 JASPAR yes 112128762
chr19 3404240 3404251 FOXC1 JASPAR yes 112128763
chr19 3404240 3404252 FOXC2 JASPAR yes 70787092
chr19 3404240 3404252 FOXC2 JASPAR yes 112128764
chr19 3404241 3404252 FOXP2 JASPAR yes 70787093
chr19 3404241 3404252 FOXP2 JASPAR yes 112128765
chr19 3404242 3404250 FOXO3 JASPAR yes 70787094
chr19 3404242 3404250 FOXO3 JASPAR yes 112128766
chr19 3404243 3404250 FOXD2 JASPAR yes 70787095
chr19 3404243 3404250 FOXI1 JASPAR yes 70787096
chr19 3404243 3404250 FOXL1 JASPAR yes 70787097
chr19 3404243 3404250 FOXO4 JASPAR yes 70787098
chr19 3404243 3404250 FOXO6 JASPAR yes 70787099
chr19 3404243 3404250 FOXP3 JASPAR yes 70787100
chr19 3404243 3404250 FOXD2 JASPAR yes 112128767
chr19 3404243 3404250 FOXI1 JASPAR yes 112128768
chr19 3404243 3404250 FOXL1 JASPAR yes 112128769
chr19 3404243 3404250 FOXO4 JASPAR yes 112128770
chr19 3404243 3404250 FOXO6 JASPAR yes 112128771
chr19 3404243 3404250 FOXP3 JASPAR yes 112128772
chr19 3404243 3404251 FOXD1 JASPAR yes 70787101
chr19 3404243 3404251 FOXO3 JASPAR yes 70787102
chr19 3404243 3404251 FOXD1 JASPAR yes 112128773
chr19 3404243 3404251 FOXO3 JASPAR yes 112128774
chr19 3404253 3404268 MEF2C JASPAR yes 70787103
chr19 3404253 3404268 MEF2C JASPAR yes 112128775
chr19 3404254 3404266 MEF2D JASPAR yes 70787104
chr19 3404254 3404266 MEF2D JASPAR yes 112128776
chr19 3404256 3404260 YY1 TRANSFAC yes 70787105
chr19 3404256 3404260 YY1 TRANSFAC yes 112128777
chr19 3404270 3404280 ZNF740 JASPAR yes 70787106
chr19 3404270 3404280 ZNF740 JASPAR yes 112128778
chr19 3404271 3404281 ZNF740 JASPAR yes 70787107
chr19 3404271 3404281 ZNF740 JASPAR yes 112128779
chr19 3404276 3404291 ZIC4 JASPAR yes 70787108
chr19 3404276 3404291 ZIC4 JASPAR yes 112128780
chr19 3404277 3404291 ZIC1 JASPAR yes 70787109
chr19 3404277 3404291 ZIC1 JASPAR yes 112128781
chr19 3404297 3404301 YY1 TRANSFAC yes 70787110
chr19 3404297 3404301 YY1 TRANSFAC yes 112128782
chr19 3404299 3404310 ESRRA JASPAR yes 70787111
chr19 3404299 3404310 ESRRA JASPAR yes 112128783
chr19 3404301 3404318 RARA JASPAR yes 70787112
chr19 3404301 3404318 RARA JASPAR yes 112128784
chr19 3404308 3404313 SP1 TRANSFAC yes 70787113
chr19 3404308 3404313 SP1 TRANSFAC yes 112128785
chr19 3404312 3404331 CTCF JASPAR yes 70787114
chr19 3404312 3404331 CTCF JASPAR yes 112128786
chr19 3404316 3404336 RREB1 JASPAR yes 70787115
chr19 3404316 3404336 RREB1 JASPAR yes 112128787
chr19 3404317 3404323 MAZ TRANSFAC yes 70787116
chr19 3404317 3404323 MAZ TRANSFAC yes 112128788
chr19 3404317 3404337 RREB1 JASPAR yes 70787117
chr19 3404317 3404337 RREB1 JASPAR yes 112128789
chr19 3404319 3404329 ZNF740 JASPAR yes 70787118
chr19 3404319 3404329 ZNF740 JASPAR yes 112128790
chr19 3404320 3404335 NR2C2 JASPAR yes 70787119
chr19 3404320 3404335 NR2C2 JASPAR yes 112128791
chr19 3404321 3404331 SP1 JASPAR yes 70787120
chr19 3404321 3404331 SP1 JASPAR yes 112128792
chr19 3404321 3404342 ZNF263 JASPAR yes 70787121
chr19 3404321 3404342 ZNF263 JASPAR yes 112128793
chr19 3404322 3404342 RREB1 JASPAR yes 70787122
chr19 3404322 3404342 RREB1 JASPAR yes 112128794
chr19 3404324 3404329 SP1 TRANSFAC yes 70787123
chr19 3404324 3404329 SP1 TRANSFAC yes 112128795
chr19 3404325 3404335 ZNF740 JASPAR yes 70787124
chr19 3404325 3404335 ZNF740 JASPAR yes 112128796
chr19 3404330 3404350 RREB1 JASPAR yes 70787125
chr19 3404330 3404350 RREB1 JASPAR yes 112128797
chr19 3404342 3404352 GCM2 JASPAR yes 70787126
chr19 3404342 3404352 GCM2 JASPAR yes 112128798
chr19 3404342 3404353 GCM1 JASPAR yes 70787127
chr19 3404342 3404353 GCM1 JASPAR yes 112128799
chr19 3404346 3404361 MEF2A JASPAR yes 70787128
chr19 3404346 3404361 MEF2A JASPAR yes 112128800
chr19 3404347 3404362 MEF2C JASPAR yes 70787129
chr19 3404347 3404362 MEF2C JASPAR yes 112128801
chr19 3404348 3404360 MEF2A JASPAR yes 70787130
chr19 3404348 3404360 MEF2B JASPAR yes 70787131
chr19 3404348 3404360 MEF2D JASPAR yes 70787132
chr19 3404348 3404360 MEF2A JASPAR yes 112128802
chr19 3404348 3404360 MEF2B JASPAR yes 112128803
chr19 3404348 3404360 MEF2D JASPAR yes 112128804
chr19 3404350 3404354 YY1 TRANSFAC yes 70787133
chr19 3404350 3404354 YY1 TRANSFAC yes 112128805
chr19 3404356 3404359 MYB TRANSFAC yes 70787134
chr19 3404356 3404359 MYB TRANSFAC yes 112128806
SNP sites on vista28288[chr19:3404098-3404373]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 3404143 rs10410896 C A
SP1 ZNF263 ZNF740
5394130
chr19 3404203 rs191267227 C G no 5394131
chr19 3404220 rs34502864 G GA
ETS2 STAT1 STAT3
5394132
Genes possibly regulated by vista28288[chr19:3404098-3404373]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 3359561 3469215 + NFIC ENSG00000141905.13 3359561 0.73 1.0 16805 55463
chr19 3474405 3480540 - C19orf77 ENSG00000095932.5 3480540 0.99 0.98 16806 23833
chr19 3490819 3500938 - DOHH ENSG00000129932.3 3500938 0.62 1.0 16807 3435
Expression level of Genes
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miRNAs possibly regulated by vista28288[chr19:3404098-3404373]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results