EnhancerDB
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  3. vista28289[chr19:3404656-3404792]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28289[chr19:3404656-3404792]
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Tissue distribution of vista28289
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Transcription factor that possibly regulate vista28289[chr19:3404656-3404792]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 3404508 3404901 YY1 UCSC Txn Factor no Conserved 108366798
chr19 3404533 3405012 POLR2A UCSC Txn Factor no Conserved 108366802
chr19 3404662 3404674 YY1 JASPAR yes 70787135
chr19 3404662 3404674 YY1 JASPAR yes 112128875
chr19 3404683 3404698 HSF1 JASPAR yes 70787136
chr19 3404683 3404698 HSF1 JASPAR yes 112128876
chr19 3404684 3404696 TAL1 JASPAR yes 70787137
chr19 3404684 3404696 TAL1 JASPAR yes 112128877
chr19 3404684 3404697 HSF1 JASPAR yes 70787138
chr19 3404684 3404697 HSF2 JASPAR yes 70787139
chr19 3404684 3404697 HSF4 JASPAR yes 70787140
chr19 3404684 3404697 HSF1 JASPAR yes 112128878
chr19 3404684 3404697 HSF2 JASPAR yes 112128879
chr19 3404684 3404697 HSF4 JASPAR yes 112128880
chr19 3404685 3404698 ZBTB18 JASPAR yes 70787141
chr19 3404685 3404698 ZBTB18 JASPAR yes 112128881
chr19 3404693 3404714 ZNF263 JASPAR yes 70787142
chr19 3404693 3404714 ZNF263 JASPAR yes 112128882
chr19 3404699 3404720 ZNF263 JASPAR yes 70787143
chr19 3404699 3404720 ZNF263 JASPAR yes 112128883
chr19 3404700 3404705 ETS2 TRANSFAC yes 70787144
chr19 3404700 3404705 ETS2 TRANSFAC yes 112128884
chr19 3404716 3404728 YY1 JASPAR yes 70787145
chr19 3404716 3404728 YY1 JASPAR yes 112128885
chr19 3404721 3404740 CTCF JASPAR yes 70787146
chr19 3404721 3404740 CTCF JASPAR yes 112128886
chr19 3404731 3404746 JUND JASPAR yes 70787147
chr19 3404731 3404746 JUND JASPAR yes 112128887
chr19 3404732 3404745 JUN JASPAR yes 70787148
chr19 3404732 3404745 JUN JASPAR yes 112128888
chr19 3404733 3404746 ATF4 JASPAR yes 70787149
chr19 3404733 3404746 ATF4 JASPAR yes 112128889
chr19 3404733 3404747 ATF7 JASPAR yes 70787150
chr19 3404733 3404747 BATF3 JASPAR yes 70787151
chr19 3404733 3404747 ATF7 JASPAR yes 112128890
chr19 3404733 3404747 BATF3 JASPAR yes 112128891
chr19 3404734 3404746 JDP2 JASPAR yes 70787152
chr19 3404734 3404746 JDP2 JASPAR yes 112128892
chr19 3404734 3404749 JUND JASPAR yes 70787153
chr19 3404734 3404749 JUND JASPAR yes 112128893
chr19 3404745 3404750 SP1 TRANSFAC yes 70787154
chr19 3404745 3404750 SP1 TRANSFAC yes 112128894
chr19 3404763 3404775 HINFP JASPAR yes 70787155
chr19 3404763 3404775 HINFP JASPAR yes 112128895
chr19 3404768 3404774 MZF1 JASPAR yes 70787156
chr19 3404768 3404774 MZF1 JASPAR yes 112128896
chr19 3404780 3404798 TP63 JASPAR yes 70787157
chr19 3404780 3404798 TP73 JASPAR yes 70787158
chr19 3404780 3404798 TP63 JASPAR yes 112128897
chr19 3404780 3404798 TP73 JASPAR yes 112128898
SNP sites on vista28289[chr19:3404656-3404792]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 3404784 rs58636871 G A
POLR2A TP63 TP73 YY1
5394138
Genes possibly regulated by vista28289[chr19:3404656-3404792]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 3359561 3469215 + NFIC ENSG00000141905.13 3359561 0.73 1.0 16805 54905
chr19 3474405 3480540 - C19orf77 ENSG00000095932.5 3480540 0.99 0.98 16806 24252
chr19 3490819 3500938 - DOHH ENSG00000129932.3 3500938 0.62 1.0 16807 3854
Expression level of Genes
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miRNAs possibly regulated by vista28289[chr19:3404656-3404792]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results