EnhancerDB
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  3. vista28291[chr19:3409586-3409938]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28291[chr19:3409586-3409938]
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Tissue distribution of vista28291
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Transcription factor that possibly regulate vista28291[chr19:3409586-3409938]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 3409626 3409910 NR3C1 UCSC Txn Factor no Conserved 108366877
chr19 3409590 3409596 ETS1 JASPAR yes 70787185
chr19 3409590 3409596 SPI1 JASPAR yes 70787186
chr19 3409590 3409596 ETS1 JASPAR yes 112129605
chr19 3409590 3409596 SPI1 JASPAR yes 112129606
chr19 3409603 3409615 HINFP JASPAR yes 70787187
chr19 3409603 3409615 HINFP JASPAR yes 112129607
chr19 3409627 3409633 TCF4 TRANSFAC yes 70787188
chr19 3409627 3409633 TCF4 TRANSFAC yes 112129608
chr19 3409633 3409643 SP1 JASPAR yes 70787189
chr19 3409633 3409643 SP1 JASPAR yes 112129609
chr19 3409636 3409641 SP1 TRANSFAC yes 70787190
chr19 3409636 3409641 SP1 TRANSFAC yes 112129610
chr19 3409648 3409659 E2F1 JASPAR yes 70787191
chr19 3409648 3409659 E2F1 JASPAR yes 112129611
chr19 3409649 3409654 SP1 TRANSFAC yes 70787192
chr19 3409649 3409654 SP1 TRANSFAC yes 112129612
chr19 3409649 3409660 E2F4 JASPAR yes 70787193
chr19 3409649 3409660 E2F6 JASPAR yes 70787194
chr19 3409649 3409660 E2F4 JASPAR yes 112129613
chr19 3409649 3409660 E2F6 JASPAR yes 112129614
chr19 3409650 3409655 SP1 TRANSFAC yes 70787195
chr19 3409650 3409655 SP1 TRANSFAC yes 112129615
chr19 3409653 3409658 ETS2 TRANSFAC yes 70787196
chr19 3409653 3409658 ETS2 TRANSFAC yes 112129616
chr19 3409659 3409664 SP1 TRANSFAC yes 70787197
chr19 3409659 3409664 SP1 TRANSFAC yes 112129617
chr19 3409661 3409676 HNF4G JASPAR yes 70787198
chr19 3409661 3409676 HNF4G JASPAR yes 112129618
chr19 3409662 3409667 SP1 TRANSFAC yes 70787199
chr19 3409662 3409667 SP1 TRANSFAC yes 112129619
chr19 3409662 3409677 HNF4A JASPAR yes 70787200
chr19 3409662 3409677 HNF4A JASPAR yes 112129620
chr19 3409685 3409691 SOX10 JASPAR yes 70787201
chr19 3409685 3409691 SOX10 JASPAR yes 112129621
chr19 3409714 3409728 TLX1 JASPAR yes 70787202
chr19 3409714 3409728 TLX1 JASPAR yes 112129622
chr19 3409718 3409739 REST JASPAR yes 70787203
chr19 3409718 3409739 REST JASPAR yes 112129623
chr19 3409737 3409752 AR JASPAR yes 70787204
chr19 3409737 3409752 AR JASPAR yes 112129624
chr19 3409737 3409754 NR3C1 JASPAR yes 70787205
chr19 3409737 3409754 NR3C2 JASPAR yes 70787206
chr19 3409737 3409754 NR3C1 JASPAR yes 112129625
chr19 3409737 3409754 NR3C2 JASPAR yes 112129626
chr19 3409750 3409755 SP1 TRANSFAC yes 70787207
chr19 3409750 3409755 SP1 TRANSFAC yes 112129627
chr19 3409750 3409756 SP1 TRANSFAC yes 70787208
chr19 3409750 3409756 SP1 TRANSFAC yes 112129628
chr19 3409763 3409769 YY1 JASPAR yes 70787209
chr19 3409763 3409769 YY1 JASPAR yes 112129629
chr19 3409792 3409796 YY1 TRANSFAC yes 70787210
chr19 3409792 3409796 YY1 TRANSFAC yes 112129630
chr19 3409793 3409808 FOXP1 JASPAR yes 70787211
chr19 3409793 3409808 FOXP1 JASPAR yes 112129631
chr19 3409794 3409806 FOXC2 JASPAR yes 70787212
chr19 3409794 3409806 FOXC2 JASPAR yes 112129632
chr19 3409815 3409831 SOX8 JASPAR yes 70787213
chr19 3409815 3409831 SOX8 JASPAR yes 112129633
chr19 3409817 3409835 ESR2 JASPAR yes 70787214
chr19 3409817 3409835 ESR2 JASPAR yes 112129634
chr19 3409820 3409824 H4TF2 TRANSFAC yes 70787215
chr19 3409820 3409824 H4TF2 TRANSFAC yes 112129635
chr19 3409828 3409840 TEAD1 JASPAR yes 70787216
chr19 3409828 3409840 TEAD1 JASPAR yes 112129636
chr19 3409835 3409841 NFIC JASPAR yes 70787217
chr19 3409835 3409841 NFIC JASPAR yes 112129637
chr19 3409844 3409855 TBX2 JASPAR yes 70787218
chr19 3409844 3409855 TBX2 JASPAR yes 112129638
chr19 3409846 3409854 TBX15 JASPAR yes 70787219
chr19 3409846 3409854 TBX1 JASPAR yes 70787220
chr19 3409846 3409854 TBX4 JASPAR yes 70787221
chr19 3409846 3409854 TBX5 JASPAR yes 70787222
chr19 3409846 3409854 TBX15 JASPAR yes 112129639
chr19 3409846 3409854 TBX1 JASPAR yes 112129640
chr19 3409846 3409854 TBX4 JASPAR yes 112129641
chr19 3409846 3409854 TBX5 JASPAR yes 112129642
chr19 3409863 3409868 ETS2 TRANSFAC yes 70787223
chr19 3409863 3409868 ETS2 TRANSFAC yes 112129643
chr19 3409878 3409892 TLX1 JASPAR yes 70787224
chr19 3409878 3409892 TLX1 JASPAR yes 112129644
chr19 3409879 3409893 TLX1 JASPAR yes 70787225
chr19 3409879 3409893 TLX1 JASPAR yes 112129645
chr19 3409886 3409905 CTCF JASPAR yes 70787226
chr19 3409886 3409905 CTCF JASPAR yes 112129646
chr19 3409892 3409902 GCM2 JASPAR yes 70787227
chr19 3409892 3409902 GCM2 JASPAR yes 112129647
chr19 3409903 3409907 YY1 TRANSFAC yes 70787228
chr19 3409903 3409907 YY1 TRANSFAC yes 112129648
chr19 3409934 3409947 SMAD2 JASPAR yes 70787229
chr19 3409934 3409947 SMAD2 JASPAR yes 112129649
SNP sites on vista28291[chr19:3409586-3409938]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 3409684 rs187651281 G A
NR3C1
5394220
chr19 3409771 rs555519692 AG A
NR3C1
5394221
chr19 3409777 rs543934226 C T
NR3C1
5394222
chr19 3409917 rs115648510 A G no 5394223
chr19 3409934 rs114034565 G A
SMAD2
5394224
Genes possibly regulated by vista28291[chr19:3409586-3409938]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 3359561 3469215 + NFIC ENSG00000141905.13 3359561 0.73 1.0 16805 49975
chr19 3474405 3480540 - C19orf77 ENSG00000095932.5 3480540 0.99 0.98 16806 29398
chr19 3490819 3500938 - DOHH ENSG00000129932.3 3500938 0.62 1.0 16807 9000
chr19 3506271 3538328 + FZR1 ENSG00000105325.9 3506271 0.64 1.0 16808 3667
Expression level of Genes
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miRNAs possibly regulated by vista28291[chr19:3409586-3409938]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results