EnhancerDB
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  3. vista28292[chr19:3428769-3429112]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28292[chr19:3428769-3429112]
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Tissue distribution of vista28292
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Transcription factor that possibly regulate vista28292[chr19:3428769-3429112]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 3428543 3428859 EBF1 UCSC Txn Factor no Conserved 108366933
chr19 3428758 3428771 NFKB1 JASPAR yes 70787230
chr19 3428758 3428771 NFKB2 JASPAR yes 70787231
chr19 3428758 3428771 NFKB1 JASPAR yes 112130933
chr19 3428758 3428771 NFKB2 JASPAR yes 112130934
chr19 3428759 3428769 NFKB1 JASPAR yes 70787232
chr19 3428759 3428769 NFKB1 JASPAR yes 112130935
chr19 3428759 3428770 NFKB1 JASPAR yes 70787233
chr19 3428759 3428770 NFKB1 JASPAR yes 112130936
chr19 3428764 3428775 EBF1 JASPAR yes 70787234
chr19 3428764 3428775 EBF1 JASPAR yes 112130937
chr19 3428796 3428810 STAT1 JASPAR yes 70787235
chr19 3428796 3428810 STAT1 JASPAR yes 112130938
chr19 3428798 3428809 ETV2 JASPAR yes 70787236
chr19 3428798 3428809 ETV2 JASPAR yes 112130939
chr19 3428801 3428812 NFKB1 JASPAR yes 70787237
chr19 3428801 3428812 NFKB1 JASPAR yes 112130940
chr19 3428802 3428812 RELA JASPAR yes 70787238
chr19 3428802 3428812 REL JASPAR yes 70787239
chr19 3428802 3428812 RELA JASPAR yes 112130941
chr19 3428802 3428812 REL JASPAR yes 112130942
chr19 3428815 3428825 SP1 JASPAR yes 70787240
chr19 3428815 3428825 SP1 JASPAR yes 112130943
chr19 3428818 3428828 SP1 JASPAR yes 70787241
chr19 3428818 3428828 SP1 JASPAR yes 112130944
chr19 3428820 3428825 SP1 TRANSFAC yes 70787242
chr19 3428820 3428825 SP1 TRANSFAC yes 112130945
chr19 3428821 3428831 SP1 JASPAR yes 70787243
chr19 3428821 3428831 SP1 JASPAR yes 112130946
chr19 3428827 3428844 ESR1 JASPAR yes 70787244
chr19 3428827 3428844 ESR1 JASPAR yes 112130947
chr19 3428828 3428843 ESR2 JASPAR yes 70787245
chr19 3428828 3428843 ESR2 JASPAR yes 112130948
chr19 3428834 3428853 CTCF JASPAR yes 70787246
chr19 3428834 3428853 CTCF JASPAR yes 112130949
chr19 3428839 3428851 TAL1 JASPAR yes 70787247
chr19 3428839 3428851 TAL1 JASPAR yes 112130950
chr19 3428841 3428851 MSC JASPAR yes 70787248
chr19 3428841 3428851 TFAP4 JASPAR yes 70787249
chr19 3428841 3428851 MSC JASPAR yes 112130951
chr19 3428841 3428851 TFAP4 JASPAR yes 112130952
chr19 3428841 3428853 TAL1 JASPAR yes 70787250
chr19 3428841 3428853 TAL1 JASPAR yes 112130953
chr19 3428853 3428871 MAFF JASPAR yes 70787251
chr19 3428853 3428871 MAFF JASPAR yes 112130954
chr19 3428854 3428869 MAFK JASPAR yes 70787252
chr19 3428854 3428869 MAFK JASPAR yes 112130955
chr19 3428855 3428861 ESR1 TRANSFAC yes 70787253
chr19 3428855 3428861 ESR1 TRANSFAC yes 112130956
chr19 3428857 3428861 ESR1 TRANSFAC yes 70787254
chr19 3428857 3428861 ESR1 TRANSFAC yes 112130957
chr19 3428858 3428869 NRL JASPAR yes 70787255
chr19 3428858 3428869 NRL JASPAR yes 112130958
chr19 3428862 3428873 ELK4 JASPAR yes 70787256
chr19 3428862 3428873 FLI1 JASPAR yes 70787257
chr19 3428862 3428873 ELK4 JASPAR yes 112130959
chr19 3428862 3428873 FLI1 JASPAR yes 112130960
chr19 3428899 3428904 SP1 TRANSFAC yes 70787258
chr19 3428899 3428904 SP1 TRANSFAC yes 112130961
chr19 3428911 3428915 NFE TRANSFAC yes 70787259
chr19 3428911 3428915 NFE TRANSFAC yes 112130962
chr19 3428951 3428961 SP1 JASPAR yes 70787260
chr19 3428951 3428961 SP1 JASPAR yes 112130963
chr19 3428952 3428956 LFA1 TRANSFAC yes 70787261
chr19 3428952 3428956 LFA1 TRANSFAC yes 112130964
chr19 3428972 3428990 MAFF JASPAR yes 70787262
chr19 3428972 3428990 MAFF JASPAR yes 112130965
chr19 3428973 3428988 MAFK JASPAR yes 70787263
chr19 3428973 3428988 MAFK JASPAR yes 112130966
chr19 3428977 3428988 NRL JASPAR yes 70787264
chr19 3428977 3428988 NRL JASPAR yes 112130967
chr19 3428992 3428995 MYB TRANSFAC yes 70787265
chr19 3428992 3428995 MYB TRANSFAC yes 112130968
chr19 3428998 3429003 SP1 TRANSFAC yes 70787266
chr19 3428998 3429003 SP1 TRANSFAC yes 112130969
chr19 3428998 3429005 SP1 TRANSFAC yes 70787267
chr19 3428998 3429005 SP1 TRANSFAC yes 112130970
chr19 3429009 3429020 FOSL2 JASPAR yes 70787268
chr19 3429009 3429020 FOSL2 JASPAR yes 112130971
chr19 3429042 3429056 PLAG1 JASPAR yes 70787269
chr19 3429042 3429056 PLAG1 JASPAR yes 112130972
chr19 3429048 3429059 E2F1 JASPAR yes 70787270
chr19 3429048 3429059 E2F1 JASPAR yes 112130973
chr19 3429049 3429060 E2F6 JASPAR yes 70787271
chr19 3429049 3429060 E2F6 JASPAR yes 112130974
chr19 3429109 3429113 NFE TRANSFAC yes 70787272
chr19 3429109 3429113 NFE TRANSFAC yes 112130975
chr19 3429109 3429114 GATA1 TRANSFAC yes 70787273
chr19 3429109 3429114 GATA1 TRANSFAC yes 112130976
chr19 3429109 3429115 GATA3 JASPAR yes 70787274
chr19 3429109 3429115 GATA3 JASPAR yes 112130977
SNP sites on vista28292[chr19:3428769-3429112]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 3428834 rs7507204 G A,C
CTCF EBF1 ESR1 ESR2
5394364
chr19 3428898 rs537106868 C T no 5394365
chr19 3428944 rs73523804 C T no 5394366
chr19 3428996 rs372292997 CAG C no 5394367
Genes possibly regulated by vista28292[chr19:3428769-3429112]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 3359561 3469215 + NFIC ENSG00000141905.13 3359561 0.73 1.0 16805 30792
chr19 3474405 3480540 - C19orf77 ENSG00000095932.5 3480540 0.99 0.98 16806 48572
chr19 3490819 3500938 - DOHH ENSG00000129932.3 3500938 0.62 1.0 16807 28174
chr19 3506271 3538328 + FZR1 ENSG00000105325.9 3506271 0.64 1.0 16808 22841
Expression level of Genes
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miRNAs possibly regulated by vista28292[chr19:3428769-3429112]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results