EnhancerDB
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  3. vista28293[chr19:3450938-3451227]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28293[chr19:3450938-3451227]
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Tissue distribution of vista28293
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Transcription factor that possibly regulate vista28293[chr19:3450938-3451227]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 3450866 3451142 USF2 UCSC Txn Factor no Conserved 108367100
chr19 3450909 3451366 EP300 UCSC Txn Factor no Conserved 108367116
chr19 3450922 3451341 TCF12 UCSC Txn Factor no Conserved 108367119
chr19 3450937 3451280 JUN UCSC Txn Factor no Conserved 108367126
chr19 3450974 3451311 FOSL2 UCSC Txn Factor no Conserved 108367137
chr19 3450995 3451251 FOS UCSC Txn Factor no Conserved 108367145
chr19 3451003 3451283 JUND UCSC Txn Factor no Conserved 108367147
chr19 3450944 3450948 NFE TRANSFAC yes 70787275
chr19 3450949 3450955 NFIC JASPAR yes 70787276
chr19 3450956 3450967 NFE2L2 JASPAR yes 70787277
chr19 3450959 3450965 JUN TRANSFAC yes 70787278
chr19 3450961 3450971 HOXB2 JASPAR yes 70787279
chr19 3450961 3450971 MEOX1 JASPAR yes 70787280
chr19 3450961 3450971 MEOX2 JASPAR yes 70787281
chr19 3450976 3450986 MAX JASPAR yes 70787282
chr19 3450976 3450987 USF1 JASPAR yes 70787283
chr19 3450976 3450987 USF2 JASPAR yes 70787284
chr19 3450977 3450987 CLOCK JASPAR yes 70787285
chr19 3450977 3450987 MAX JASPAR yes 70787286
chr19 3450977 3450987 MLX JASPAR yes 70787287
chr19 3450977 3450987 MNT JASPAR yes 70787288
chr19 3450977 3450987 TFE3 JASPAR yes 70787289
chr19 3450977 3450987 TFEB JASPAR yes 70787290
chr19 3450977 3450988 USF1 JASPAR yes 70787291
chr19 3450977 3450988 USF2 JASPAR yes 70787292
chr19 3450978 3450985 USF1 JASPAR yes 70787293
chr19 3450978 3450988 MAX JASPAR yes 70787294
chr19 3450979 3450984 MYC TRANSFAC yes 70787295
chr19 3450979 3450984 USF1 TRANSFAC yes 70787296
chr19 3450979 3450984 USF2 TRANSFAC yes 70787297
chr19 3450979 3450986 USF1 JASPAR yes 70787298
chr19 3450983 3450997 TLX1 JASPAR yes 70787299
chr19 3450990 3451005 MEF2C JASPAR yes 70787300
chr19 3450991 3451006 MEF2A JASPAR yes 70787301
chr19 3450998 3451010 FOXC2 JASPAR yes 70787302
chr19 3450999 3451010 FOXB1 JASPAR yes 70787303
chr19 3450999 3451010 FOXC1 JASPAR yes 70787304
chr19 3451000 3451004 YY1 TRANSFAC yes 70787305
chr19 3451006 3451010 NFE TRANSFAC yes 70787306
chr19 3451006 3451011 GATA1 TRANSFAC yes 70787307
chr19 3451006 3451012 GATA3 JASPAR yes 70787308
chr19 3451011 3451026 TFAP2A JASPAR yes 70787309
chr19 3451011 3451026 TFAP2C JASPAR yes 70787310
chr19 3451041 3451056 MEF2C JASPAR yes 70787311
chr19 3451042 3451057 MEF2A JASPAR yes 70787312
chr19 3451043 3451055 MEF2A JASPAR yes 70787313
chr19 3451043 3451055 MEF2B JASPAR yes 70787314
chr19 3451043 3451055 MEF2D JASPAR yes 70787315
chr19 3451044 3451054 MEF2A JASPAR yes 70787316
chr19 3451045 3451049 TEAD2 TRANSFAC yes 70787317
chr19 3451045 3451050 TBP TRANSFAC yes 70787318
chr19 3451045 3451051 TMF TRANSFAC yes 70787319
chr19 3451048 3451063 PRDM1 JASPAR yes 70787320
chr19 3451049 3451061 IRF1 JASPAR yes 70787321
chr19 3451061 3451073 MEF2B JASPAR yes 70787322
chr19 3451068 3451084 SOX8 JASPAR yes 70787323
chr19 3451078 3451086 FOXO3 JASPAR yes 70787324
chr19 3451084 3451097 ELF1 JASPAR yes 70787325
chr19 3451087 3451094 SPIB JASPAR yes 70787326
chr19 3451111 3451125 JUN JASPAR yes 70787327
chr19 3451113 3451124 BATF JASPAR yes 70787328
chr19 3451114 3451125 FOSL2 JASPAR yes 70787329
chr19 3451114 3451125 JUNB JASPAR yes 70787330
chr19 3451115 3451126 FOS JASPAR yes 70787331
chr19 3451115 3451126 FOSL1 JASPAR yes 70787332
chr19 3451115 3451126 JUND JASPAR yes 70787333
chr19 3451115 3451126 NFE2 JASPAR yes 70787334
chr19 3451116 3451125 JDP2 JASPAR yes 70787335
chr19 3451116 3451127 FOSL2 JASPAR yes 70787336
chr19 3451116 3451127 JUNB JASPAR yes 70787337
chr19 3451116 3451127 NFE2L2 JASPAR yes 70787338
chr19 3451116 3451130 JUN JASPAR yes 70787339
chr19 3451117 3451128 BATF JASPAR yes 70787340
chr19 3451152 3451169 RARA JASPAR yes 70787341
chr19 3451161 3451175 ATF7 JASPAR yes 70787342
chr19 3451161 3451175 BATF3 JASPAR yes 70787343
chr19 3451162 3451174 JDP2 JASPAR yes 70787344
chr19 3451165 3451177 CREB1 JASPAR yes 70787345
chr19 3451166 3451171 ATF1 TRANSFAC yes 70787346
chr19 3451207 3451217 TFEB JASPAR yes 70787347
chr19 3451207 3451217 TFEC JASPAR yes 70787348
chr19 3451207 3451218 USF1 JASPAR yes 70787349
chr19 3451207 3451218 USF2 JASPAR yes 70787350
chr19 3451208 3451218 MAX JASPAR yes 70787351
chr19 3451209 3451222 JUN JASPAR yes 70787352
chr19 3451211 3451226 JUND JASPAR yes 70787353
chr19 3451219 3451223 YY1 TRANSFAC yes 70787354
SNP sites on vista28293[chr19:3450938-3451227]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 3450955 rs146482723 A G
EP300 JUN NFIC TCF12 USF2
5394627
chr19 3451024 rs114005498 G A
EP300 FOS FOSL2 JUN JUND TCF12 TFAP2A TFAP2C USF2
5394628
chr19 3451110 rs150141194 A G
EP300 FOS FOSL2 JUN JUND TCF12 USF2
5394629
Genes possibly regulated by vista28293[chr19:3450938-3451227]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 3359561 3469215 + NFIC ENSG00000141905.13 3359561 0.73 1.0 16805 8623
chr19 3474405 3480540 - C19orf77 ENSG00000095932.5 3480540 0.99 0.98 16806 70687
chr19 3490819 3500938 - DOHH ENSG00000129932.3 3500938 0.62 1.0 16807 50289
chr19 3506271 3538328 + FZR1 ENSG00000105325.9 3506271 0.64 1.0 16808 44956
chr19 3539152 3544028 + C19orf71 ENSG00000183397.5 3539152 0.83 1.0 16810 12075
Expression level of Genes
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miRNAs possibly regulated by vista28293[chr19:3450938-3451227]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results