EnhancerDB
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  3. vista28295[chr19:3459088-3459397]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28295[chr19:3459088-3459397]
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Tissue distribution of vista28295
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Transcription factor that possibly regulate vista28295[chr19:3459088-3459397]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 3458959 3459286 MAFK UCSC Txn Factor no Conserved 108367216
chr19 3459095 3459099 YY1 TRANSFAC yes 70787384
chr19 3459095 3459099 YY1 TRANSFAC yes 112133417
chr19 3459095 3459105 ERF JASPAR yes 70787385
chr19 3459095 3459105 ETV3 JASPAR yes 70787386
chr19 3459095 3459105 ERF JASPAR yes 112133418
chr19 3459095 3459105 ETV3 JASPAR yes 112133419
chr19 3459097 3459103 ETS1 JASPAR yes 70787387
chr19 3459097 3459103 ETS1 JASPAR yes 112133420
chr19 3459106 3459124 NFYA JASPAR yes 70787388
chr19 3459106 3459124 NFYA JASPAR yes 112133421
chr19 3459108 3459126 MAFF JASPAR yes 70787389
chr19 3459108 3459126 MAFF JASPAR yes 112133422
chr19 3459109 3459124 MAFK JASPAR yes 70787390
chr19 3459109 3459124 MAFK JASPAR yes 112133423
chr19 3459113 3459124 NRL JASPAR yes 70787391
chr19 3459113 3459124 NRL JASPAR yes 112133424
chr19 3459119 3459140 ZNF263 JASPAR yes 70787392
chr19 3459119 3459140 ZNF263 JASPAR yes 112133425
chr19 3459127 3459135 SP1 TRANSFAC yes 70787393
chr19 3459127 3459135 SP1 TRANSFAC yes 112133426
chr19 3459127 3459137 SP1 JASPAR yes 70787394
chr19 3459127 3459137 SP1 JASPAR yes 112133427
chr19 3459148 3459162 STAT1 JASPAR yes 70787395
chr19 3459148 3459162 STAT1 JASPAR yes 112133428
chr19 3459156 3459177 ZNF263 JASPAR yes 70787396
chr19 3459156 3459177 ZNF263 JASPAR yes 112133429
chr19 3459157 3459172 NR2C2 JASPAR yes 70787397
chr19 3459157 3459172 NR2C2 JASPAR yes 112133430
chr19 3459159 3459180 ZNF263 JASPAR yes 70787398
chr19 3459159 3459180 ZNF263 JASPAR yes 112133431
chr19 3459163 3459169 NFE2 TRANSFAC yes 70787399
chr19 3459163 3459169 NFE2 TRANSFAC yes 112133432
chr19 3459167 3459173 SP1 TRANSFAC yes 70787400
chr19 3459167 3459173 SP1 TRANSFAC yes 112133433
chr19 3459167 3459177 SP1 JASPAR yes 70787401
chr19 3459167 3459177 SP1 JASPAR yes 112133434
chr19 3459170 3459180 SP1 JASPAR yes 70787402
chr19 3459170 3459180 SP1 JASPAR yes 112133435
chr19 3459185 3459197 GLI2 JASPAR yes 70787403
chr19 3459185 3459197 ZBTB7B JASPAR yes 70787404
chr19 3459185 3459197 ZBTB7C JASPAR yes 70787405
chr19 3459185 3459197 GLI2 JASPAR yes 112133436
chr19 3459185 3459197 ZBTB7B JASPAR yes 112133437
chr19 3459185 3459197 ZBTB7C JASPAR yes 112133438
chr19 3459186 3459198 ZBTB7A JASPAR yes 70787406
chr19 3459186 3459198 ZBTB7A JASPAR yes 112133439
chr19 3459188 3459193 SP1 TRANSFAC yes 70787407
chr19 3459188 3459193 SP1 TRANSFAC yes 112133440
chr19 3459202 3459223 ZNF263 JASPAR yes 70787408
chr19 3459202 3459223 ZNF263 JASPAR yes 112133441
chr19 3459240 3459255 HNF4G JASPAR yes 70787409
chr19 3459240 3459255 NR2C2 JASPAR yes 70787410
chr19 3459240 3459255 HNF4G JASPAR yes 112133442
chr19 3459240 3459255 NR2C2 JASPAR yes 112133443
chr19 3459246 3459256 ZNF740 JASPAR yes 70787411
chr19 3459246 3459256 ZNF740 JASPAR yes 112133444
chr19 3459259 3459264 GATA2 JASPAR yes 70787412
chr19 3459259 3459264 GATA2 JASPAR yes 112133445
chr19 3459274 3459286 POU2F1 JASPAR yes 70787413
chr19 3459274 3459286 POU2F1 JASPAR yes 112133446
chr19 3459274 3459287 POU3F3 JASPAR yes 70787414
chr19 3459274 3459287 POU3F3 JASPAR yes 112133447
chr19 3459274 3459288 POU1F1 JASPAR yes 70787415
chr19 3459274 3459288 POU1F1 JASPAR yes 112133448
chr19 3459275 3459287 POU3F1 JASPAR yes 70787416
chr19 3459275 3459287 POU3F2 JASPAR yes 70787417
chr19 3459275 3459287 POU3F1 JASPAR yes 112133449
chr19 3459275 3459287 POU3F2 JASPAR yes 112133450
chr19 3459276 3459285 POU3F4 JASPAR yes 70787418
chr19 3459276 3459285 POU5F1B JASPAR yes 70787419
chr19 3459276 3459285 POU3F4 JASPAR yes 112133451
chr19 3459276 3459285 POU5F1B JASPAR yes 112133452
chr19 3459279 3459289 EN2 JASPAR yes 70787420
chr19 3459279 3459289 ESX1 JASPAR yes 70787421
chr19 3459279 3459289 GBX1 JASPAR yes 70787422
chr19 3459279 3459289 GBX2 JASPAR yes 70787423
chr19 3459279 3459289 HESX1 JASPAR yes 70787424
chr19 3459279 3459289 LBX2 JASPAR yes 70787425
chr19 3459279 3459289 LHX2 JASPAR yes 70787426
chr19 3459279 3459289 MIXL1 JASPAR yes 70787427
chr19 3459279 3459289 RAX JASPAR yes 70787428
chr19 3459279 3459289 EN2 JASPAR yes 112133453
chr19 3459279 3459289 ESX1 JASPAR yes 112133454
chr19 3459279 3459289 GBX1 JASPAR yes 112133455
chr19 3459279 3459289 GBX2 JASPAR yes 112133456
chr19 3459279 3459289 HESX1 JASPAR yes 112133457
chr19 3459279 3459289 LBX2 JASPAR yes 112133458
chr19 3459279 3459289 LHX2 JASPAR yes 112133459
chr19 3459279 3459289 MIXL1 JASPAR yes 112133460
chr19 3459279 3459289 RAX JASPAR yes 112133461
chr19 3459280 3459288 LHX9 JASPAR yes 70787429
chr19 3459280 3459288 SHOX JASPAR yes 70787430
chr19 3459280 3459288 LHX9 JASPAR yes 112133462
chr19 3459280 3459288 SHOX JASPAR yes 112133463
chr19 3459280 3459289 VENTX JASPAR yes 70787431
chr19 3459280 3459289 VENTX JASPAR yes 112133464
chr19 3459297 3459301 ESR1 TRANSFAC yes 70787432
chr19 3459297 3459301 ESR1 TRANSFAC yes 112133465
chr19 3459307 3459321 PLAG1 JASPAR yes 70787433
chr19 3459307 3459321 PLAG1 JASPAR yes 112133466
chr19 3459307 3459327 RREB1 JASPAR yes 70787434
chr19 3459307 3459327 RREB1 JASPAR yes 112133467
chr19 3459331 3459335 NFE TRANSFAC yes 70787435
chr19 3459331 3459335 NFE TRANSFAC yes 112133468
chr19 3459336 3459352 GLIS1 JASPAR yes 70787436
chr19 3459336 3459352 GLIS1 JASPAR yes 112133469
chr19 3459337 3459347 ZNF740 JASPAR yes 70787437
chr19 3459337 3459347 ZNF740 JASPAR yes 112133470
chr19 3459350 3459360 SP1 JASPAR yes 70787438
chr19 3459350 3459360 SP1 JASPAR yes 112133471
chr19 3459367 3459372 SP1 TRANSFAC yes 70787439
chr19 3459367 3459372 SP1 TRANSFAC yes 112133472
chr19 3459373 3459388 NR2C2 JASPAR yes 70787440
chr19 3459373 3459388 NR2C2 JASPAR yes 112133473
chr19 3459376 3459382 SP1 TRANSFAC yes 70787441
chr19 3459376 3459382 SP1 TRANSFAC yes 112133474
chr19 3459376 3459386 SP1 JASPAR yes 70787442
chr19 3459376 3459386 SP1 TRANSFAC yes 70787443
chr19 3459376 3459386 SP1 JASPAR yes 112133475
chr19 3459376 3459386 SP1 TRANSFAC yes 112133476
SNP sites on vista28295[chr19:3459088-3459397]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 3459178 rs150281059 C T
MAFK SP1 ZNF263
5394718
chr19 3459217 rs12984804 C T
MAFK ZNF263
5394719
chr19 3459224 rs138947864 C T
MAFK
5394720
chr19 3459371 rs185654009 C T
SP1
5394721
Genes possibly regulated by vista28295[chr19:3459088-3459397]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 3359561 3469215 + NFIC ENSG00000141905.13 3359561 0.73 1.0 16805 473
chr19 3474405 3480540 - C19orf77 ENSG00000095932.5 3480540 0.99 0.98 16806 78857
chr19 3490819 3500938 - DOHH ENSG00000129932.3 3500938 0.62 1.0 16807 58459
chr19 3506271 3538328 + FZR1 ENSG00000105325.9 3506271 0.64 1.0 16808 53126
chr19 3539152 3544028 + C19orf71 ENSG00000183397.5 3539152 0.83 1.0 16810 20245
Expression level of Genes
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miRNAs possibly regulated by vista28295[chr19:3459088-3459397]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results