EnhancerDB
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  3. vista28298[chr19:3520804-3521051]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28298[chr19:3520804-3521051]
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Tissue distribution of vista28298
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Transcription factor that possibly regulate vista28298[chr19:3520804-3521051]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 3520217 3520965 MAX UCSC Txn Factor no Conserved 108367527
chr19 3520297 3521008 MYC UCSC Txn Factor no Conserved 108367548
chr19 3520628 3520811 TAL1 UCSC Txn Factor no Conserved 108367641
chr19 3520646 3520826 TEAD4 UCSC Txn Factor no Conserved 108367644
chr19 3520815 3520823 MEIS2 JASPAR yes 70787598
chr19 3520815 3520823 MEIS3 JASPAR yes 70787599
chr19 3520815 3520823 MEIS2 JASPAR yes 112137428
chr19 3520815 3520823 MEIS3 JASPAR yes 112137429
chr19 3520832 3520843 GCM1 JASPAR yes 70787600
chr19 3520832 3520843 GCM1 JASPAR yes 112137430
chr19 3520833 3520843 GCM2 JASPAR yes 70787601
chr19 3520833 3520843 GCM2 JASPAR yes 112137431
chr19 3520846 3520850 NFE TRANSFAC yes 70787602
chr19 3520846 3520850 NFE TRANSFAC yes 112137432
chr19 3520855 3520867 CREB1 JASPAR yes 70787603
chr19 3520855 3520867 CREB1 JASPAR yes 112137433
chr19 3520857 3520870 ATF4 JASPAR yes 70787604
chr19 3520857 3520870 ATF4 JASPAR yes 112137434
chr19 3520862 3520882 TP63 JASPAR yes 70787605
chr19 3520862 3520882 TP63 JASPAR yes 112137435
chr19 3520863 3520881 TP53 JASPAR yes 70787606
chr19 3520863 3520881 TP63 JASPAR yes 70787607
chr19 3520863 3520881 TP73 JASPAR yes 70787608
chr19 3520863 3520881 TP53 JASPAR yes 112137436
chr19 3520863 3520881 TP63 JASPAR yes 112137437
chr19 3520863 3520881 TP73 JASPAR yes 112137438
chr19 3520864 3520879 TP53 JASPAR yes 70787609
chr19 3520864 3520879 TP53 JASPAR yes 112137439
chr19 3520864 3520884 TP53 JASPAR yes 70787610
chr19 3520864 3520884 TP53 JASPAR yes 112137440
chr19 3520865 3520880 TP53 JASPAR yes 70787611
chr19 3520865 3520880 TP53 JASPAR yes 112137441
chr19 3520884 3520899 IRF9 JASPAR yes 70787612
chr19 3520884 3520899 IRF9 JASPAR yes 112137442
chr19 3520890 3520908 SRF JASPAR yes 70787613
chr19 3520890 3520908 SRF JASPAR yes 112137443
chr19 3520892 3520903 STAT3 JASPAR yes 70787614
chr19 3520892 3520903 STAT3 JASPAR yes 112137444
chr19 3520902 3520914 HES7 JASPAR yes 70787615
chr19 3520902 3520914 PKNOX1 JASPAR yes 70787616
chr19 3520902 3520914 PKNOX2 JASPAR yes 70787617
chr19 3520902 3520914 HES7 JASPAR yes 112137445
chr19 3520902 3520914 PKNOX1 JASPAR yes 112137446
chr19 3520902 3520914 PKNOX2 JASPAR yes 112137447
chr19 3520903 3520912 SNAI2 JASPAR yes 70787618
chr19 3520903 3520912 SNAI2 JASPAR yes 112137448
chr19 3520903 3520913 HEY2 JASPAR yes 70787619
chr19 3520903 3520913 ID4 JASPAR yes 70787620
chr19 3520903 3520913 TCF3 JASPAR yes 70787621
chr19 3520903 3520913 TCF4 JASPAR yes 70787622
chr19 3520903 3520913 HEY2 JASPAR yes 112137449
chr19 3520903 3520913 ID4 JASPAR yes 112137450
chr19 3520903 3520913 TCF3 JASPAR yes 112137451
chr19 3520903 3520913 TCF4 JASPAR yes 112137452
chr19 3520932 3520943 FOSL2 JASPAR yes 70787623
chr19 3520932 3520943 JUNB JASPAR yes 70787624
chr19 3520932 3520943 FOSL2 JASPAR yes 112137453
chr19 3520932 3520943 JUNB JASPAR yes 112137454
chr19 3520933 3520944 FOS JASPAR yes 70787625
chr19 3520933 3520944 FOSL1 JASPAR yes 70787626
chr19 3520933 3520944 JUND JASPAR yes 70787627
chr19 3520933 3520944 FOS JASPAR yes 112137455
chr19 3520933 3520944 FOSL1 JASPAR yes 112137456
chr19 3520933 3520944 JUND JASPAR yes 112137457
chr19 3520934 3520945 FOSL2 JASPAR yes 70787628
chr19 3520934 3520945 JUNB JASPAR yes 70787629
chr19 3520934 3520945 NFE2L2 JASPAR yes 70787630
chr19 3520934 3520945 FOSL2 JASPAR yes 112137458
chr19 3520934 3520945 JUNB JASPAR yes 112137459
chr19 3520934 3520945 NFE2L2 JASPAR yes 112137460
chr19 3520934 3520948 JUN JASPAR yes 70787631
chr19 3520934 3520948 JUN JASPAR yes 112137461
chr19 3520935 3520942 JUN TRANSFAC yes 70787632
chr19 3520935 3520942 JUN TRANSFAC yes 112137462
chr19 3520935 3520946 BATF JASPAR yes 70787633
chr19 3520935 3520946 BATF JASPAR yes 112137463
chr19 3520942 3520957 TFAP2C JASPAR yes 70787634
chr19 3520942 3520957 TFAP2C JASPAR yes 112137464
chr19 3520945 3520956 EBF1 JASPAR yes 70787635
chr19 3520945 3520956 EBF1 JASPAR yes 112137465
chr19 3520978 3520991 SMAD2 JASPAR yes 70787636
chr19 3520978 3520991 SMAD2 JASPAR yes 112137466
chr19 3520984 3521000 ZNF143 JASPAR yes 70787637
chr19 3520984 3521000 ZNF143 JASPAR yes 112137467
chr19 3520992 3521006 CREB3L1 JASPAR yes 70787638
chr19 3520992 3521006 CREB3L1 JASPAR yes 112137468
chr19 3520995 3521005 HINFP JASPAR yes 70787639
chr19 3520995 3521005 HINFP JASPAR yes 112137469
chr19 3520995 3521007 HINFP JASPAR yes 70787640
chr19 3520995 3521007 HINFP JASPAR yes 112137470
chr19 3520996 3521011 TFAP2C JASPAR yes 70787641
chr19 3520996 3521011 TFAP2C JASPAR yes 112137471
SNP sites on vista28298[chr19:3520804-3521051]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 3521017 rs571280866 G A no 5395214
Genes possibly regulated by vista28298[chr19:3520804-3521051]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 3474405 3480540 - C19orf77 ENSG00000095932.5 3480540 0.99 0.98 16806 59736
chr19 3490819 3500938 - DOHH ENSG00000129932.3 3500938 0.62 1.0 16807 80134
chr19 3506271 3538328 + FZR1 ENSG00000105325.9 3506271 0.64 1.0 16808 85467
chr19 3538259 3574288 - MFSD12 ENSG00000161091.8 3574288 0.79 1.0 16809 46763
chr19 3539152 3544028 + C19orf71 ENSG00000183397.5 3539152 0.83 1.0 16810 81899
chr19 3572775 3579086 + HMG20B ENSG00000064961.14 3572775 0.58 1.0 16811 48276
chr19 3585551 3593539 + GIPC3 ENSG00000179855.5 3585551 0.78 0.94 16812 35500
chr19 3594504 3606838 - TBXA2R ENSG00000006638.7 3606838 0.76 1.0 16813 14213
Expression level of Genes
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miRNAs possibly regulated by vista28298[chr19:3520804-3521051]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results