EnhancerDB
  1. Home
  2. Enhancers
  3. vista28299[chr19:3521162-3521389]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28299[chr19:3521162-3521389]
Back to top
Tissue distribution of vista28299
Back to top
Transcription factor that possibly regulate vista28299[chr19:3521162-3521389]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 3521162 3521166 YY1 TRANSFAC yes 70787642
chr19 3521162 3521166 YY1 TRANSFAC yes 112137480
chr19 3521192 3521206 EBF1 JASPAR yes 70787643
chr19 3521192 3521206 EBF1 JASPAR yes 112137481
chr19 3521193 3521204 EBF1 JASPAR yes 70787644
chr19 3521193 3521204 EBF1 JASPAR yes 112137482
chr19 3521206 3521211 GATA1 TRANSFAC yes 70787645
chr19 3521206 3521211 GATA1 TRANSFAC yes 112137483
chr19 3521212 3521219 SPI1 JASPAR yes 70787646
chr19 3521212 3521219 SPI1 JASPAR yes 112137484
chr19 3521218 3521229 NFE2L2 JASPAR yes 70787647
chr19 3521218 3521229 NFE2L2 JASPAR yes 112137485
chr19 3521221 3521227 ESR1 TRANSFAC yes 70787648
chr19 3521221 3521227 ESR1 TRANSFAC yes 112137486
chr19 3521223 3521227 ESR1 TRANSFAC yes 70787649
chr19 3521223 3521227 ESR1 TRANSFAC yes 112137487
chr19 3521223 3521234 USF1 JASPAR yes 70787650
chr19 3521223 3521234 USF1 JASPAR yes 112137488
chr19 3521224 3521234 TFE3 JASPAR yes 70787651
chr19 3521224 3521234 TFEB JASPAR yes 70787652
chr19 3521224 3521234 TFEC JASPAR yes 70787653
chr19 3521224 3521234 TFE3 JASPAR yes 112137489
chr19 3521224 3521234 TFEB JASPAR yes 112137490
chr19 3521224 3521234 TFEC JASPAR yes 112137491
chr19 3521231 3521246 RUNX2 JASPAR yes 70787654
chr19 3521231 3521246 RUNX2 JASPAR yes 112137492
chr19 3521241 3521255 IRF8 JASPAR yes 70787655
chr19 3521241 3521255 IRF8 JASPAR yes 112137493
chr19 3521241 3521256 IRF9 JASPAR yes 70787656
chr19 3521241 3521256 IRF9 JASPAR yes 112137494
chr19 3521254 3521262 FOXL1 JASPAR yes 70787657
chr19 3521254 3521262 FOXL1 JASPAR yes 112137495
chr19 3521259 3521272 DUXA JASPAR yes 70787658
chr19 3521259 3521272 DUXA JASPAR yes 112137496
chr19 3521260 3521263 MYB TRANSFAC yes 70787659
chr19 3521260 3521263 MYB TRANSFAC yes 112137497
chr19 3521263 3521278 MAFK JASPAR yes 70787660
chr19 3521263 3521278 MAFK JASPAR yes 112137498
chr19 3521276 3521279 MYB TRANSFAC yes 70787661
chr19 3521276 3521279 MYB TRANSFAC yes 112137499
chr19 3521279 3521283 YY1 TRANSFAC yes 70787662
chr19 3521279 3521283 YY1 TRANSFAC yes 112137500
chr19 3521299 3521314 LEF1 JASPAR yes 70787663
chr19 3521299 3521314 LEF1 JASPAR yes 112137501
chr19 3521326 3521336 HOXC10 JASPAR yes 70787664
chr19 3521326 3521336 HOXD11 JASPAR yes 70787665
chr19 3521326 3521336 HOXC10 JASPAR yes 112137502
chr19 3521326 3521336 HOXD11 JASPAR yes 112137503
chr19 3521326 3521337 HOXC11 JASPAR yes 70787666
chr19 3521326 3521337 HOXC12 JASPAR yes 70787667
chr19 3521326 3521337 HOXD12 JASPAR yes 70787668
chr19 3521326 3521337 HOXC11 JASPAR yes 112137504
chr19 3521326 3521337 HOXC12 JASPAR yes 112137505
chr19 3521326 3521337 HOXD12 JASPAR yes 112137506
chr19 3521329 3521332 MYB TRANSFAC yes 70787669
chr19 3521329 3521332 MYB TRANSFAC yes 112137507
chr19 3521332 3521346 SPI1 JASPAR yes 70787670
chr19 3521332 3521346 SPI1 JASPAR yes 112137508
chr19 3521342 3521351 ZEB1 JASPAR yes 70787671
chr19 3521342 3521351 ZEB1 JASPAR yes 112137509
chr19 3521349 3521355 NFIC JASPAR yes 70787672
chr19 3521349 3521355 NFIC JASPAR yes 112137510
chr19 3521358 3521372 EBF1 JASPAR yes 70787673
chr19 3521358 3521372 EBF1 JASPAR yes 112137511
chr19 3521359 3521370 EBF1 JASPAR yes 70787674
chr19 3521359 3521370 EBF1 JASPAR yes 112137512
chr19 3521371 3521376 TFAP2A TRANSFAC yes 70787675
chr19 3521371 3521376 TFAP2A TRANSFAC yes 112137513
chr19 3521371 3521377 MZF1 JASPAR yes 70787676
chr19 3521371 3521377 MZF1 JASPAR yes 112137514
chr19 3521371 3521392 ZNF263 JASPAR yes 70787677
chr19 3521371 3521392 ZNF263 JASPAR yes 112137515
chr19 3521373 3521394 ZNF263 JASPAR yes 70787678
chr19 3521373 3521394 ZNF263 JASPAR yes 112137516
chr19 3521380 3521390 MZF1 JASPAR yes 70787679
chr19 3521380 3521390 MZF1 JASPAR yes 112137517
chr19 3521383 3521388 TFAP2A TRANSFAC yes 70787680
chr19 3521383 3521388 TFAP2A TRANSFAC yes 112137518
chr19 3521383 3521389 MZF1 JASPAR yes 70787681
chr19 3521383 3521389 MZF1 JASPAR yes 112137519
SNP sites on vista28299[chr19:3521162-3521389]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 3521285 rs138507761 G A no 5395215
chr19 3521294 rs575328190 C T no 5395216
chr19 3521295 rs544346455 G A no 5395217
Genes possibly regulated by vista28299[chr19:3521162-3521389]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 3474405 3480540 - C19orf77 ENSG00000095932.5 3480540 0.99 0.98 16806 59378
chr19 3490819 3500938 - DOHH ENSG00000129932.3 3500938 0.62 1.0 16807 79776
chr19 3506271 3538328 + FZR1 ENSG00000105325.9 3506271 0.64 1.0 16808 85109
chr19 3538259 3574288 - MFSD12 ENSG00000161091.8 3574288 0.79 1.0 16809 47101
chr19 3539152 3544028 + C19orf71 ENSG00000183397.5 3539152 0.83 1.0 16810 82237
chr19 3572775 3579086 + HMG20B ENSG00000064961.14 3572775 0.58 1.0 16811 48614
chr19 3585551 3593539 + GIPC3 ENSG00000179855.5 3585551 0.78 0.94 16812 35838
chr19 3594504 3606838 - TBXA2R ENSG00000006638.7 3606838 0.76 1.0 16813 14551
Expression level of Genes
Back to top
miRNAs possibly regulated by vista28299[chr19:3521162-3521389]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results