EnhancerDB
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  3. vista28305[chr19:3570616-3571018]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28305[chr19:3570616-3571018]
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Tissue distribution of vista28305
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Transcription factor that possibly regulate vista28305[chr19:3570616-3571018]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 3570546 3570797 CEBPB UCSC Txn Factor no Conserved 108367927
chr19 3570614 3570627 SMAD2 JASPAR yes 70787900
chr19 3570614 3570627 SMAD2 JASPAR yes 112141058
chr19 3570639 3570654 NR2C2 JASPAR yes 70787901
chr19 3570639 3570654 NR2C2 JASPAR yes 112141059
chr19 3570642 3570646 ESR1 TRANSFAC yes 70787902
chr19 3570642 3570646 ESR1 TRANSFAC yes 112141060
chr19 3570644 3570662 MAFF JASPAR yes 70787903
chr19 3570644 3570662 MAFF JASPAR yes 112141061
chr19 3570646 3570667 MAFG JASPAR yes 70787904
chr19 3570646 3570667 MAFG JASPAR yes 112141062
chr19 3570652 3570663 NFE2L2 JASPAR yes 70787905
chr19 3570652 3570663 NFE2L2 JASPAR yes 112141063
chr19 3570654 3570665 CEBPA JASPAR yes 70787906
chr19 3570654 3570665 CEBPA JASPAR yes 112141064
chr19 3570655 3570666 CEBPB JASPAR yes 70787907
chr19 3570655 3570666 CEBPB JASPAR yes 112141065
chr19 3570675 3570689 MTF1 JASPAR yes 70787908
chr19 3570675 3570689 MTF1 JASPAR yes 112141066
chr19 3570685 3570698 HSF4 JASPAR yes 70787909
chr19 3570685 3570698 HSF4 JASPAR yes 112141067
chr19 3570721 3570732 TFAP2A JASPAR yes 70787910
chr19 3570721 3570732 TFAP2B JASPAR yes 70787911
chr19 3570721 3570732 TFAP2C JASPAR yes 70787912
chr19 3570721 3570732 TFAP2A JASPAR yes 112141068
chr19 3570721 3570732 TFAP2B JASPAR yes 112141069
chr19 3570721 3570732 TFAP2C JASPAR yes 112141070
chr19 3570722 3570731 TFAP2A JASPAR yes 70787913
chr19 3570722 3570731 TFAP2A JASPAR yes 112141071
chr19 3570740 3570749 SOX9 JASPAR yes 70787914
chr19 3570740 3570749 SOX9 JASPAR yes 112141072
chr19 3570755 3570762 JUN TRANSFAC yes 70787915
chr19 3570755 3570762 SP1 TRANSFAC yes 70787916
chr19 3570755 3570762 JUN TRANSFAC yes 112141073
chr19 3570755 3570762 SP1 TRANSFAC yes 112141074
chr19 3570762 3570765 MYB TRANSFAC yes 70787917
chr19 3570762 3570765 MYB TRANSFAC yes 112141075
chr19 3570765 3570781 POU4F2 JASPAR yes 70787918
chr19 3570765 3570781 POU4F2 JASPAR yes 112141076
chr19 3570771 3570775 TEAD2 TRANSFAC yes 70787919
chr19 3570771 3570775 TEAD2 TRANSFAC yes 112141077
chr19 3570782 3570786 YY1 TRANSFAC yes 70787920
chr19 3570782 3570786 YY1 TRANSFAC yes 112141078
chr19 3570792 3570808 SOX4 JASPAR yes 70787921
chr19 3570792 3570808 SOX4 JASPAR yes 112141079
chr19 3570793 3570808 SOX21 JASPAR yes 70787922
chr19 3570793 3570808 SOX21 JASPAR yes 112141080
chr19 3570815 3570819 YY1 TRANSFAC yes 70787923
chr19 3570815 3570819 YY1 TRANSFAC yes 112141081
chr19 3570821 3570839 ESR2 JASPAR yes 70787924
chr19 3570821 3570839 ESR2 JASPAR yes 112141082
chr19 3570833 3570839 YY1 JASPAR yes 70787925
chr19 3570833 3570839 YY1 JASPAR yes 112141083
chr19 3570843 3570854 PROP1 JASPAR yes 70787926
chr19 3570843 3570854 PROP1 JASPAR yes 112141084
chr19 3570849 3570860 HOXC12 JASPAR yes 70787927
chr19 3570849 3570860 HOXC12 JASPAR yes 112141085
chr19 3570850 3570860 HOXD11 JASPAR yes 70787928
chr19 3570850 3570860 HOXD11 JASPAR yes 112141086
chr19 3570879 3570888 RUNX2 JASPAR yes 70787929
chr19 3570879 3570888 RUNX2 JASPAR yes 112141087
chr19 3570879 3570889 RUNX3 JASPAR yes 70787930
chr19 3570879 3570889 RUNX3 JASPAR yes 112141088
chr19 3570898 3570902 ESR1 TRANSFAC yes 70787931
chr19 3570898 3570902 ESR1 TRANSFAC yes 112141089
chr19 3570904 3570910 MZF1 JASPAR yes 70787932
chr19 3570904 3570910 MZF1 JASPAR yes 112141090
chr19 3570905 3570915 SP1 JASPAR yes 70787933
chr19 3570905 3570915 SP1 JASPAR yes 112141091
chr19 3570927 3570937 MZF1 JASPAR yes 70787934
chr19 3570927 3570937 MZF1 JASPAR yes 112141092
chr19 3570930 3570936 SP1 TRANSFAC yes 70787935
chr19 3570930 3570936 SP1 TRANSFAC yes 112141093
chr19 3570936 3570940 NFE TRANSFAC yes 70787936
chr19 3570936 3570940 NFE TRANSFAC yes 112141094
chr19 3570944 3570950 ZNF354C JASPAR yes 70787937
chr19 3570944 3570950 ZNF354C JASPAR yes 112141095
chr19 3570950 3570960 REL JASPAR yes 70787938
chr19 3570950 3570960 REL JASPAR yes 112141096
chr19 3570950 3570961 NFKB1 JASPAR yes 70787939
chr19 3570950 3570961 NFKB1 JASPAR yes 112141097
chr19 3570955 3570970 HSF1 JASPAR yes 70787940
chr19 3570955 3570970 HSF1 JASPAR yes 112141098
chr19 3570956 3570969 HSF1 JASPAR yes 70787941
chr19 3570956 3570969 HSF1 JASPAR yes 112141099
chr19 3570980 3570993 NR2F1 JASPAR yes 70787942
chr19 3570980 3570993 NR2F1 JASPAR yes 112141100
chr19 3570982 3570993 ESRRA JASPAR yes 70787943
chr19 3570982 3570993 ESRRA JASPAR yes 112141101
chr19 3570983 3570991 NR4A2 JASPAR yes 70787944
chr19 3570983 3570991 NR4A2 JASPAR yes 112141102
chr19 3570983 3570998 HNF4A JASPAR yes 70787945
chr19 3570983 3570998 HNF4A JASPAR yes 112141103
chr19 3570984 3570994 RORA JASPAR yes 70787946
chr19 3570984 3570994 RORA JASPAR yes 112141104
chr19 3570984 3570999 HNF4G JASPAR yes 70787947
chr19 3570984 3570999 HNF4G JASPAR yes 112141105
chr19 3570988 3570994 SOX10 JASPAR yes 70787948
chr19 3570988 3570994 SOX10 JASPAR yes 112141106
SNP sites on vista28305[chr19:3570616-3571018]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 3570691 rs141616486 G A,T
CEBPB HSF4
5395797
chr19 3570718 rs186396788 C T
CEBPB
5395798
chr19 3570898 rs112381470 T C
ESR1
5395799
chr19 3570926 rs111828434 A G no 5395800
chr19 3570978 rs112622089 C T no 5395801
chr19 3571010 rs139752370 C G no 5395802
Genes possibly regulated by vista28305[chr19:3570616-3571018]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 3474405 3480540 - C19orf77 ENSG00000095932.5 3480540 0.99 0.98 16806 9924
chr19 3490819 3500938 - DOHH ENSG00000129932.3 3500938 0.62 1.0 16807 30322
chr19 3506271 3538328 + FZR1 ENSG00000105325.9 3506271 0.64 1.0 16808 35655
chr19 3538259 3574288 - MFSD12 ENSG00000161091.8 3574288 0.79 1.0 16809 96730
chr19 3539152 3544028 + C19orf71 ENSG00000183397.5 3539152 0.83 1.0 16810 68536
chr19 3572775 3579086 + HMG20B ENSG00000064961.14 3572775 0.58 1.0 16811 98243
chr19 3585551 3593539 + GIPC3 ENSG00000179855.5 3585551 0.78 0.94 16812 85467
chr19 3594504 3606838 - TBXA2R ENSG00000006638.7 3606838 0.76 1.0 16813 64180
chr19 3610639 3626813 - CACTIN ENSG00000105298.9 3626813 0.64 1.0 16814 44205
Expression level of Genes
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miRNAs possibly regulated by vista28305[chr19:3570616-3571018]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results