EnhancerDB
  1. Home
  2. Enhancers
  3. vista28307[chr19:3603456-3603548]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28307[chr19:3603456-3603548]
Back to top
Tissue distribution of vista28307
Back to top
Transcription factor that possibly regulate vista28307[chr19:3603456-3603548]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 3603447 3603459 E2F1 JASPAR yes 70787978
chr19 3603447 3603459 E2F1 JASPAR yes 112141410
chr19 3603476 3603486 RELA JASPAR yes 70787979
chr19 3603476 3603486 REL JASPAR yes 70787980
chr19 3603476 3603486 RELA JASPAR yes 112141411
chr19 3603476 3603486 REL JASPAR yes 112141412
chr19 3603476 3603487 NFKB1 JASPAR yes 70787981
chr19 3603476 3603487 NFKB1 JASPAR yes 112141413
chr19 3603476 3603489 NFKB1 JASPAR yes 70787982
chr19 3603476 3603489 NFKB2 JASPAR yes 70787983
chr19 3603476 3603489 NFKB1 JASPAR yes 112141414
chr19 3603476 3603489 NFKB2 JASPAR yes 112141415
chr19 3603477 3603487 NFKB1 JASPAR yes 70787984
chr19 3603477 3603487 RELA JASPAR yes 70787985
chr19 3603477 3603487 NFKB1 JASPAR yes 112141416
chr19 3603477 3603487 RELA JASPAR yes 112141417
chr19 3603477 3603488 NFKB1 JASPAR yes 70787986
chr19 3603477 3603488 NFKB1 JASPAR yes 112141418
chr19 3603479 3603484 H4TF1 TRANSFAC yes 70787987
chr19 3603479 3603484 H4TF1 TRANSFAC yes 112141419
chr19 3603481 3603495 EBF1 JASPAR yes 70787988
chr19 3603481 3603495 EBF1 JASPAR yes 112141420
chr19 3603482 3603493 EBF1 JASPAR yes 70787989
chr19 3603482 3603493 EBF1 JASPAR yes 112141421
chr19 3603488 3603505 NR3C1 JASPAR yes 70787990
chr19 3603488 3603505 NR3C2 JASPAR yes 70787991
chr19 3603488 3603505 NR3C1 JASPAR yes 112141422
chr19 3603488 3603505 NR3C2 JASPAR yes 112141423
chr19 3603519 3603540 MAFG JASPAR yes 70787992
chr19 3603519 3603540 MAFG JASPAR yes 112141424
chr19 3603523 3603538 MEF2C JASPAR yes 70787993
chr19 3603523 3603538 MEF2C JASPAR yes 112141425
chr19 3603532 3603542 RELA JASPAR yes 70787994
chr19 3603532 3603542 REL JASPAR yes 70787995
chr19 3603532 3603542 RELA JASPAR yes 112141426
chr19 3603532 3603542 REL JASPAR yes 112141427
chr19 3603534 3603544 TEAD1 JASPAR yes 70787996
chr19 3603534 3603544 TEAD4 JASPAR yes 70787997
chr19 3603534 3603544 TEAD1 JASPAR yes 112141428
chr19 3603534 3603544 TEAD4 JASPAR yes 112141429
chr19 3603535 3603543 TEAD3 JASPAR yes 70787998
chr19 3603535 3603543 TEAD3 JASPAR yes 112141430
chr19 3603538 3603543 ETS2 TRANSFAC yes 70787999
chr19 3603538 3603543 ETS2 TRANSFAC yes 112141431
SNP sites on vista28307[chr19:3603456-3603548]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28307[chr19:3603456-3603548]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 3506271 3538328 + FZR1 ENSG00000105325.9 3506271 0.64 1.0 16808 2815
chr19 3538259 3574288 - MFSD12 ENSG00000161091.8 3574288 0.79 1.0 16809 70832
chr19 3539152 3544028 + C19orf71 ENSG00000183397.5 3539152 0.83 1.0 16810 35696
chr19 3572775 3579086 + HMG20B ENSG00000064961.14 3572775 0.58 1.0 16811 69319
chr19 3585551 3593539 + GIPC3 ENSG00000179855.5 3585551 0.78 0.94 16812 82095
chr19 3594504 3606838 - TBXA2R ENSG00000006638.7 3606838 0.76 1.0 16813 96710
chr19 3610639 3626813 - CACTIN ENSG00000105298.9 3626813 0.64 1.0 16814 76735
chr19 3630181 3700477 - PIP5K1C ENSG00000186111.4 3700477 0.79 1.0 16815 3071
Expression level of Genes
Back to top
miRNAs possibly regulated by vista28307[chr19:3603456-3603548]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results