EnhancerDB
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  3. vista2831[chr1:109188271-109188477]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2831[chr1:109188271-109188477]
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Tissue distribution of vista2831
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Transcription factor that possibly regulate vista2831[chr1:109188271-109188477]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 109188276 109188280 NFE TRANSFAC yes 31398143
chr1 109188276 109188280 NFE TRANSFAC yes 118346011
chr1 109188294 109188309 FOXP1 JASPAR yes 31398144
chr1 109188294 109188309 FOXP1 JASPAR yes 118346012
chr1 109188295 109188306 FOXP2 JASPAR yes 31398145
chr1 109188295 109188306 FOXP2 JASPAR yes 118346013
chr1 109188296 109188307 FOXC1 JASPAR yes 31398146
chr1 109188296 109188307 FOXC1 JASPAR yes 118346014
chr1 109188297 109188305 FOXO3 JASPAR yes 31398147
chr1 109188297 109188305 FOXO3 JASPAR yes 118346015
chr1 109188297 109188308 FOXA1 JASPAR yes 31398148
chr1 109188297 109188308 FOXA1 JASPAR yes 118346016
chr1 109188306 109188321 RUNX2 JASPAR yes 31398149
chr1 109188306 109188321 RUNX2 JASPAR yes 118346017
chr1 109188342 109188353 TBX20 JASPAR yes 31398150
chr1 109188342 109188353 TBX20 JASPAR yes 118346018
chr1 109188363 109188368 USF2 TRANSFAC yes 31398151
chr1 109188363 109188368 USF2 TRANSFAC yes 118346019
chr1 109188367 109188373 TCF4 TRANSFAC yes 31398152
chr1 109188367 109188373 TCF4 TRANSFAC yes 118346020
chr1 109188379 109188383 NFE TRANSFAC yes 31398153
chr1 109188379 109188383 NFE TRANSFAC yes 118346021
chr1 109188380 109188390 SMAD3 JASPAR yes 31398154
chr1 109188380 109188390 SMAD3 JASPAR yes 118346022
chr1 109188405 109188417 INSM1 JASPAR yes 31398155
chr1 109188405 109188417 INSM1 JASPAR yes 118346023
chr1 109188405 109188419 RXRB JASPAR yes 31398156
chr1 109188405 109188419 RXRG JASPAR yes 31398157
chr1 109188405 109188419 RXRB JASPAR yes 118346024
chr1 109188405 109188419 RXRG JASPAR yes 118346025
chr1 109188405 109188420 NR2C2 JASPAR yes 31398158
chr1 109188405 109188420 NR2C2 JASPAR yes 118346026
chr1 109188408 109188421 NR2F1 JASPAR yes 31398159
chr1 109188408 109188421 NR2F1 JASPAR yes 118346027
chr1 109188412 109188420 CREB1 JASPAR yes 31398160
chr1 109188412 109188420 CREB1 JASPAR yes 118346028
chr1 109188422 109188433 HOXC13 JASPAR yes 31398161
chr1 109188422 109188433 HOXC13 JASPAR yes 118346029
chr1 109188423 109188433 EMX1 JASPAR yes 31398162
chr1 109188423 109188433 EMX1 JASPAR yes 118346030
chr1 109188424 109188432 NKX6-1 JASPAR yes 31398163
chr1 109188424 109188432 NKX6-2 JASPAR yes 31398164
chr1 109188424 109188432 NKX6-1 JASPAR yes 118346031
chr1 109188424 109188432 NKX6-2 JASPAR yes 118346032
chr1 109188424 109188434 POU6F2 JASPAR yes 31398165
chr1 109188424 109188434 POU6F2 JASPAR yes 118346033
chr1 109188442 109188448 TCF4 TRANSFAC yes 31398166
chr1 109188442 109188448 TCF4 TRANSFAC yes 118346034
chr1 109188458 109188463 GATA2 JASPAR yes 31398167
chr1 109188458 109188463 GATA2 JASPAR yes 118346035
chr1 109188471 109188485 STAT1 JASPAR yes 31398168
chr1 109188471 109188485 STAT1 JASPAR yes 118346036
SNP sites on vista2831[chr1:109188271-109188477]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 109188277 rs556373943 C CT
NFE
543177
chr1 109188308 rs143700995 T C
FOXA1 FOXP1 RUNX2
543178
chr1 109188382 rs2358530 G A
NFE SMAD3
543179
Genes possibly regulated by vista2831[chr1:109188271-109188477]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 109102711 109187522 + FAM102B ENSG00000162636.11 109102711 0.71 0.97 958 14440
chr1 109190912 109204148 - HENMT1 ENSG00000162639.11 109204148 0.82 0.93 959 84329
chr1 109234945 109244425 + PRPF38B ENSG00000134186.7 109234945 0.73 0.99 960 53532
chr1 109255279 109285365 + FNDC7 ENSG00000143107.4 109255279 0.96 0.97 961 33198
Expression level of Genes
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miRNAs possibly regulated by vista2831[chr1:109188271-109188477]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results