EnhancerDB
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  3. vista28311[chr19:3670243-3670423]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28311[chr19:3670243-3670423]
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Tissue distribution of vista28311
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Transcription factor that possibly regulate vista28311[chr19:3670243-3670423]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 3670113 3672282 POLR2A UCSC Txn Factor no Conserved 108368175
chr19 3670113 3672282 POLR2A UCSC Txn Factor no Conserved 108368176
chr19 3670185 3670495 JUND UCSC Txn Factor no Conserved 108368201
chr19 3670211 3670688 KDM5B UCSC Txn Factor no Conserved 108368210
chr19 3670305 3670695 PHF8 UCSC Txn Factor no Conserved 108368218
chr19 3670226 3670243 ESR1 JASPAR yes 70788143
chr19 3670226 3670243 ESR1 JASPAR yes 112143073
chr19 3670247 3670262 STAT1 JASPAR yes 70788144
chr19 3670247 3670262 STAT1 JASPAR yes 112143074
chr19 3670249 3670260 STAT1 JASPAR yes 70788145
chr19 3670249 3670260 STAT3 JASPAR yes 70788146
chr19 3670249 3670260 STAT1 JASPAR yes 112143075
chr19 3670249 3670260 STAT3 JASPAR yes 112143076
chr19 3670269 3670285 SRF JASPAR yes 70788147
chr19 3670269 3670285 SRF JASPAR yes 112143077
chr19 3670275 3670279 YY1 TRANSFAC yes 70788148
chr19 3670275 3670279 YY1 TRANSFAC yes 112143078
chr19 3670291 3670297 TCF4 TRANSFAC yes 70788149
chr19 3670291 3670297 TCF4 TRANSFAC yes 112143079
chr19 3670292 3670307 JUND JASPAR yes 70788150
chr19 3670292 3670307 JUND JASPAR yes 112143080
chr19 3670293 3670306 JUN JASPAR yes 70788151
chr19 3670293 3670306 JUN JASPAR yes 112143081
chr19 3670294 3670308 ATF7 JASPAR yes 70788152
chr19 3670294 3670308 BATF3 JASPAR yes 70788153
chr19 3670294 3670308 ATF7 JASPAR yes 112143082
chr19 3670294 3670308 BATF3 JASPAR yes 112143083
chr19 3670295 3670307 JDP2 JASPAR yes 70788154
chr19 3670295 3670307 JDP2 JASPAR yes 112143084
chr19 3670310 3670325 JUND JASPAR yes 70788155
chr19 3670310 3670325 JUND JASPAR yes 112143085
chr19 3670311 3670324 JUN JASPAR yes 70788156
chr19 3670311 3670324 JUN JASPAR yes 112143086
chr19 3670312 3670326 ATF7 JASPAR yes 70788157
chr19 3670312 3670326 ATF7 JASPAR yes 112143087
chr19 3670313 3670325 JDP2 JASPAR yes 70788158
chr19 3670313 3670325 JDP2 JASPAR yes 112143088
chr19 3670313 3670328 JUND JASPAR yes 70788159
chr19 3670313 3670328 JUND JASPAR yes 112143089
chr19 3670314 3670327 JUN JASPAR yes 70788160
chr19 3670314 3670327 JUN JASPAR yes 112143090
chr19 3670315 3670323 CREB1 JASPAR yes 70788161
chr19 3670315 3670323 CREB1 JASPAR yes 112143091
chr19 3670318 3670322 ESR1 TRANSFAC yes 70788162
chr19 3670318 3670322 ESR1 TRANSFAC yes 112143092
chr19 3670334 3670339 SP1 TRANSFAC yes 70788163
chr19 3670334 3670339 SP1 TRANSFAC yes 112143093
chr19 3670346 3670352 ZNF354C JASPAR yes 70788164
chr19 3670346 3670352 ZNF354C JASPAR yes 112143094
chr19 3670353 3670371 SRF JASPAR yes 70788165
chr19 3670353 3670371 SRF JASPAR yes 112143095
chr19 3670354 3670358 NFE TRANSFAC yes 70788166
chr19 3670354 3670358 NFE TRANSFAC yes 112143096
chr19 3670355 3670371 SRF JASPAR yes 70788167
chr19 3670355 3670371 SRF JASPAR yes 112143097
chr19 3670355 3670373 SRF JASPAR yes 70788168
chr19 3670355 3670373 SRF JASPAR yes 112143098
chr19 3670356 3670368 SRF JASPAR yes 70788169
chr19 3670356 3670368 SRF JASPAR yes 112143099
chr19 3670361 3670365 TEAD2 TRANSFAC yes 70788170
chr19 3670361 3670365 TEAD2 TRANSFAC yes 112143100
chr19 3670393 3670413 RREB1 JASPAR yes 70788171
chr19 3670393 3670413 RREB1 JASPAR yes 112143101
chr19 3670398 3670419 ZNF263 JASPAR yes 70788172
chr19 3670398 3670419 ZNF263 JASPAR yes 112143102
chr19 3670404 3670414 SP1 JASPAR yes 70788173
chr19 3670404 3670414 SP1 JASPAR yes 112143103
chr19 3670405 3670415 SP1 JASPAR yes 70788174
chr19 3670405 3670415 SP1 JASPAR yes 112143104
chr19 3670406 3670411 SP1 TRANSFAC yes 70788175
chr19 3670406 3670411 SP1 TRANSFAC yes 112143105
chr19 3670407 3670412 SP1 TRANSFAC yes 70788176
chr19 3670407 3670412 SP1 TRANSFAC yes 112143106
chr19 3670407 3670413 SP1 TRANSFAC yes 70788177
chr19 3670407 3670413 SP1 TRANSFAC yes 112143107
chr19 3670411 3670417 MAZ TRANSFAC yes 70788178
chr19 3670411 3670417 MAZ TRANSFAC yes 112143108
chr19 3670415 3670419 LFA1 TRANSFAC yes 70788179
chr19 3670415 3670419 LFA1 TRANSFAC yes 112143109
chr19 3670421 3670436 TFAP2C JASPAR yes 70788180
chr19 3670421 3670436 TFAP2C JASPAR yes 112143110
SNP sites on vista28311[chr19:3670243-3670423]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 3670306 rs545891315 T C
ATF7 BATF3 JDP2 JUN JUND KDM5B PHF8 POLR2A
5396399
chr19 3670328 rs562771304 G A
JUND KDM5B PHF8 POLR2A
5396400
Genes possibly regulated by vista28311[chr19:3670243-3670423]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 3538259 3574288 - MFSD12 ENSG00000161091.8 3574288 0.79 1.0 16809 4045
chr19 3572775 3579086 + HMG20B ENSG00000064961.14 3572775 0.58 1.0 16811 2532
chr19 3585551 3593539 + GIPC3 ENSG00000179855.5 3585551 0.78 0.94 16812 15308
chr19 3594504 3606838 - TBXA2R ENSG00000006638.7 3606838 0.76 1.0 16813 36595
chr19 3610639 3626813 - CACTIN ENSG00000105298.9 3626813 0.64 1.0 16814 56570
chr19 3630181 3700477 - PIP5K1C ENSG00000186111.4 3700477 0.79 1.0 16815 69946
chr19 3708107 3750811 + TJP3 ENSG00000105289.10 3708107 0.78 1.0 16816 62316
chr19 3750817 3761697 - APBA3 ENSG00000011132.7 3761697 0.55 1.0 16817 8726
chr19 3762662 3768573 + MRPL54 ENSG00000183617.4 3762662 0.59 0.99 16818 7761
Expression level of Genes
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miRNAs possibly regulated by vista28311[chr19:3670243-3670423]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results