EnhancerDB
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  3. vista28312[chr19:3671007-3671294]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28312[chr19:3671007-3671294]
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Tissue distribution of vista28312
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Transcription factor that possibly regulate vista28312[chr19:3671007-3671294]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 3670113 3672282 POLR2A UCSC Txn Factor no Conserved 108368175
chr19 3670113 3672282 POLR2A UCSC Txn Factor no Conserved 108368176
chr19 3671007 3671295 RUNX3 UCSC Txn Factor no Conserved 108368277
chr19 3671080 3671365 MAFK UCSC Txn Factor no Conserved 108368289
chr19 3671044 3671065 ZNF263 JASPAR yes 70788181
chr19 3671044 3671065 ZNF263 JASPAR yes 112143198
chr19 3671047 3671068 ZNF263 JASPAR yes 70788182
chr19 3671047 3671068 ZNF263 JASPAR yes 112143199
chr19 3671050 3671071 ZNF263 JASPAR yes 70788183
chr19 3671050 3671071 ZNF263 JASPAR yes 112143200
chr19 3671051 3671072 ZNF263 JASPAR yes 70788184
chr19 3671051 3671072 ZNF263 JASPAR yes 112143201
chr19 3671052 3671057 ETS2 TRANSFAC yes 70788185
chr19 3671052 3671057 ETS2 TRANSFAC yes 112143202
chr19 3671054 3671075 ZNF263 JASPAR yes 70788186
chr19 3671054 3671075 ZNF263 JASPAR yes 112143203
chr19 3671055 3671060 ETS2 TRANSFAC yes 70788187
chr19 3671055 3671060 ETS2 TRANSFAC yes 112143204
chr19 3671060 3671081 ZNF263 JASPAR yes 70788188
chr19 3671060 3671081 ZNF263 JASPAR yes 112143205
chr19 3671069 3671082 ELF1 JASPAR yes 70788189
chr19 3671069 3671082 ELF1 JASPAR yes 112143206
chr19 3671070 3671074 LFA1 TRANSFAC yes 70788190
chr19 3671070 3671074 LFA1 TRANSFAC yes 112143207
chr19 3671070 3671084 TLX1 JASPAR yes 70788191
chr19 3671070 3671084 TLX1 JASPAR yes 112143208
chr19 3671072 3671083 FLI1 JASPAR yes 70788192
chr19 3671072 3671083 FLI1 JASPAR yes 112143209
chr19 3671085 3671090 SP1 TRANSFAC yes 70788193
chr19 3671085 3671090 SP1 TRANSFAC yes 112143210
chr19 3671094 3671099 SP1 TRANSFAC yes 70788194
chr19 3671094 3671099 SP1 TRANSFAC yes 112143211
chr19 3671095 3671100 SP1 TRANSFAC yes 70788195
chr19 3671095 3671100 SP1 TRANSFAC yes 112143212
chr19 3671098 3671108 NFKB1 JASPAR yes 70788196
chr19 3671098 3671108 NFKB1 JASPAR yes 112143213
chr19 3671098 3671113 HSF1 JASPAR yes 70788197
chr19 3671098 3671113 HSF1 JASPAR yes 112143214
chr19 3671099 3671112 HSF2 JASPAR yes 70788198
chr19 3671099 3671112 HSF2 JASPAR yes 112143215
chr19 3671119 3671124 SP1 TRANSFAC yes 70788199
chr19 3671119 3671124 SP1 TRANSFAC yes 112143216
chr19 3671125 3671138 NFKB1 JASPAR yes 70788200
chr19 3671125 3671138 NFKB1 JASPAR yes 112143217
chr19 3671145 3671149 NFE TRANSFAC yes 70788201
chr19 3671145 3671149 NFE TRANSFAC yes 112143218
chr19 3671146 3671158 INSM1 JASPAR yes 70788202
chr19 3671146 3671158 INSM1 JASPAR yes 112143219
chr19 3671151 3671156 SP1 TRANSFAC yes 70788203
chr19 3671151 3671156 SP1 TRANSFAC yes 112143220
chr19 3671156 3671177 REST JASPAR yes 70788204
chr19 3671156 3671177 REST JASPAR yes 112143221
chr19 3671157 3671176 REST JASPAR yes 70788205
chr19 3671157 3671176 REST JASPAR yes 112143222
chr19 3671158 3671168 SP1 JASPAR yes 70788206
chr19 3671158 3671168 SP1 JASPAR yes 112143223
chr19 3671160 3671169 THAP1 JASPAR yes 70788207
chr19 3671160 3671169 THAP1 JASPAR yes 112143224
chr19 3671172 3671179 JUN TRANSFAC yes 70788208
chr19 3671172 3671179 JUN TRANSFAC yes 112143225
chr19 3671193 3671207 PLAG1 JASPAR yes 70788209
chr19 3671193 3671207 PLAG1 JASPAR yes 112143226
chr19 3671195 3671206 EBF1 JASPAR yes 70788210
chr19 3671195 3671206 EBF1 JASPAR yes 112143227
chr19 3671199 3671210 NFKB1 JASPAR yes 70788211
chr19 3671199 3671210 NFKB1 JASPAR yes 112143228
chr19 3671200 3671205 SP1 TRANSFAC yes 70788212
chr19 3671200 3671205 SP1 TRANSFAC yes 112143229
chr19 3671200 3671211 NFKB1 JASPAR yes 70788213
chr19 3671200 3671211 NFKB1 JASPAR yes 112143230
chr19 3671203 3671213 ZNF740 JASPAR yes 70788214
chr19 3671203 3671213 ZNF740 JASPAR yes 112143231
chr19 3671203 3671217 GLIS2 JASPAR yes 70788215
chr19 3671203 3671217 GLIS2 JASPAR yes 112143232
chr19 3671204 3671224 RREB1 JASPAR yes 70788216
chr19 3671204 3671224 RREB1 JASPAR yes 112143233
chr19 3671205 3671215 ZNF740 JASPAR yes 70788217
chr19 3671205 3671215 ZNF740 JASPAR yes 112143234
chr19 3671205 3671219 PLAG1 JASPAR yes 70788218
chr19 3671205 3671219 PLAG1 JASPAR yes 112143235
chr19 3671218 3671232 JUN JASPAR yes 70788219
chr19 3671218 3671232 JUN JASPAR yes 112143236
chr19 3671221 3671232 FOSL2 JASPAR yes 70788220
chr19 3671221 3671232 JUNB JASPAR yes 70788221
chr19 3671221 3671232 FOSL2 JASPAR yes 112143237
chr19 3671221 3671232 JUNB JASPAR yes 112143238
chr19 3671222 3671233 FOS JASPAR yes 70788222
chr19 3671222 3671233 FOSL1 JASPAR yes 70788223
chr19 3671222 3671233 JUND JASPAR yes 70788224
chr19 3671222 3671233 FOS JASPAR yes 112143239
chr19 3671222 3671233 FOSL1 JASPAR yes 112143240
chr19 3671222 3671233 JUND JASPAR yes 112143241
chr19 3671222 3671240 MAFF JASPAR yes 70788225
chr19 3671222 3671240 MAFF JASPAR yes 112143242
chr19 3671223 3671230 JUN TRANSFAC yes 70788226
chr19 3671223 3671230 JUN TRANSFAC yes 112143243
chr19 3671223 3671234 NFE2L2 JASPAR yes 70788227
chr19 3671223 3671234 NFE2L2 JASPAR yes 112143244
chr19 3671223 3671237 JUN JASPAR yes 70788228
chr19 3671223 3671237 JUN JASPAR yes 112143245
chr19 3671223 3671238 MAFK JASPAR yes 70788229
chr19 3671223 3671238 MAFK JASPAR yes 112143246
chr19 3671226 3671238 NHLH1 JASPAR yes 70788230
chr19 3671226 3671238 NHLH1 JASPAR yes 112143247
chr19 3671227 3671237 MSC JASPAR yes 70788231
chr19 3671227 3671237 NHLH1 JASPAR yes 70788232
chr19 3671227 3671237 TFAP4 JASPAR yes 70788233
chr19 3671227 3671237 MSC JASPAR yes 112143248
chr19 3671227 3671237 NHLH1 JASPAR yes 112143249
chr19 3671227 3671237 TFAP4 JASPAR yes 112143250
chr19 3671231 3671242 FOXP2 JASPAR yes 70788234
chr19 3671231 3671242 FOXP2 JASPAR yes 112143251
chr19 3671233 3671241 FOXO3 JASPAR yes 70788235
chr19 3671233 3671241 FOXO3 JASPAR yes 112143252
chr19 3671258 3671271 NR2F1 JASPAR yes 70788236
chr19 3671258 3671271 NR2F1 JASPAR yes 112143253
chr19 3671260 3671268 NR4A2 JASPAR yes 70788237
chr19 3671260 3671268 NR4A2 JASPAR yes 112143254
chr19 3671262 3671266 ESR1 TRANSFAC yes 70788238
chr19 3671262 3671266 ESR1 TRANSFAC yes 112143255
chr19 3671276 3671280 H4TF2 TRANSFAC yes 70788239
chr19 3671276 3671280 H4TF2 TRANSFAC yes 112143256
chr19 3671285 3671294 THAP1 JASPAR yes 70788240
chr19 3671285 3671294 THAP1 JASPAR yes 112143257
SNP sites on vista28312[chr19:3671007-3671294]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 3671065 rs118118372 A T
POLR2A RUNX3 ZNF263
5396410
chr19 3671143 rs576847387 G A
MAFK POLR2A RUNX3
5396411
chr19 3671151 rs539401602 T C
INSM1 MAFK POLR2A RUNX3 SP1
5396412
chr19 3671185 rs576500934 G A
MAFK POLR2A RUNX3
5396413
Genes possibly regulated by vista28312[chr19:3671007-3671294]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 3538259 3574288 - MFSD12 ENSG00000161091.8 3574288 0.79 1.0 16809 3281
chr19 3572775 3579086 + HMG20B ENSG00000064961.14 3572775 0.58 1.0 16811 1768
chr19 3585551 3593539 + GIPC3 ENSG00000179855.5 3585551 0.78 0.94 16812 14544
chr19 3594504 3606838 - TBXA2R ENSG00000006638.7 3606838 0.76 1.0 16813 35831
chr19 3610639 3626813 - CACTIN ENSG00000105298.9 3626813 0.64 1.0 16814 55806
chr19 3630181 3700477 - PIP5K1C ENSG00000186111.4 3700477 0.79 1.0 16815 70817
chr19 3708107 3750811 + TJP3 ENSG00000105289.10 3708107 0.78 1.0 16816 63187
chr19 3750817 3761697 - APBA3 ENSG00000011132.7 3761697 0.55 1.0 16817 9597
chr19 3762662 3768573 + MRPL54 ENSG00000183617.4 3762662 0.59 0.99 16818 8632
Expression level of Genes
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miRNAs possibly regulated by vista28312[chr19:3671007-3671294]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results