EnhancerDB
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  3. vista28313[chr19:3683675-3684043]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28313[chr19:3683675-3684043]
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Tissue distribution of vista28313
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Transcription factor that possibly regulate vista28313[chr19:3683675-3684043]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 3684025 3684381 RUNX3 UCSC Txn Factor no Conserved 108368478
chr19 3684025 3684381 RUNX3 UCSC Txn Factor no Conserved 108368479
chr19 3683675 3683681 ATF1 TRANSFAC yes 70788241
chr19 3683675 3683681 ATF1 TRANSFAC yes 112144507
chr19 3683675 3683687 CREB1 JASPAR yes 70788242
chr19 3683675 3683687 CREB1 JASPAR yes 112144508
chr19 3683696 3683717 ZNF263 JASPAR yes 70788243
chr19 3683696 3683717 ZNF263 JASPAR yes 112144509
chr19 3683708 3683729 ZNF263 JASPAR yes 70788244
chr19 3683708 3683729 ZNF263 JASPAR yes 112144510
chr19 3683717 3683722 SP1 TRANSFAC yes 70788245
chr19 3683717 3683722 SP1 TRANSFAC yes 112144511
chr19 3683718 3683723 SP1 TRANSFAC yes 70788246
chr19 3683718 3683723 SP1 TRANSFAC yes 112144512
chr19 3683718 3683724 SP1 TRANSFAC yes 70788247
chr19 3683718 3683724 SP1 TRANSFAC yes 112144513
chr19 3683721 3683731 SP1 JASPAR yes 70788248
chr19 3683721 3683731 SP1 JASPAR yes 112144514
chr19 3683723 3683728 ETS2 TRANSFAC yes 70788249
chr19 3683723 3683728 ETS2 TRANSFAC yes 112144515
chr19 3683725 3683743 ESR2 JASPAR yes 70788250
chr19 3683725 3683743 ESR2 JASPAR yes 112144516
chr19 3683727 3683742 ESR2 JASPAR yes 70788251
chr19 3683727 3683742 ESR2 JASPAR yes 112144517
chr19 3683727 3683747 ESR1 JASPAR yes 70788252
chr19 3683727 3683747 ESR1 JASPAR yes 112144518
chr19 3683728 3683732 LFA1 TRANSFAC yes 70788253
chr19 3683728 3683732 LFA1 TRANSFAC yes 112144519
chr19 3683735 3683740 SP1 TRANSFAC yes 70788254
chr19 3683735 3683740 SP1 TRANSFAC yes 112144520
chr19 3683737 3683750 TFAP2B JASPAR yes 70788255
chr19 3683737 3683750 TFAP2B JASPAR yes 112144521
chr19 3683751 3683766 AR JASPAR yes 70788256
chr19 3683751 3683766 AR JASPAR yes 112144522
chr19 3683766 3683781 TFAP2A JASPAR yes 70788257
chr19 3683766 3683781 TFAP2C JASPAR yes 70788258
chr19 3683766 3683781 TFAP2A JASPAR yes 112144523
chr19 3683766 3683781 TFAP2C JASPAR yes 112144524
chr19 3683766 3683785 PAX5 JASPAR yes 70788259
chr19 3683766 3683785 PAX5 JASPAR yes 112144525
chr19 3683769 3683781 TFAP2A JASPAR yes 70788260
chr19 3683769 3683781 TFAP2B JASPAR yes 70788261
chr19 3683769 3683781 TFAP2C JASPAR yes 70788262
chr19 3683769 3683781 TFAP2A JASPAR yes 112144526
chr19 3683769 3683781 TFAP2B JASPAR yes 112144527
chr19 3683769 3683781 TFAP2C JASPAR yes 112144528
chr19 3683769 3683784 TFAP2A JASPAR yes 70788263
chr19 3683769 3683784 TFAP2C JASPAR yes 70788264
chr19 3683769 3683784 TFAP2A JASPAR yes 112144529
chr19 3683769 3683784 TFAP2C JASPAR yes 112144530
chr19 3683770 3683779 TFAP2A JASPAR yes 70788265
chr19 3683770 3683779 TFAP2A JASPAR yes 112144531
chr19 3683771 3683780 TFAP2A JASPAR yes 70788266
chr19 3683771 3683780 TFAP2A JASPAR yes 112144532
chr19 3683776 3683780 LFA1 TRANSFAC yes 70788267
chr19 3683776 3683780 LFA1 TRANSFAC yes 112144533
chr19 3683805 3683820 RFX5 JASPAR yes 70788268
chr19 3683805 3683820 RFX5 JASPAR yes 112144534
chr19 3683811 3683815 LFA1 TRANSFAC yes 70788269
chr19 3683811 3683815 LFA1 TRANSFAC yes 112144535
chr19 3683820 3683835 AR JASPAR yes 70788270
chr19 3683820 3683835 AR JASPAR yes 112144536
chr19 3683820 3683837 NR3C1 JASPAR yes 70788271
chr19 3683820 3683837 NR3C2 JASPAR yes 70788272
chr19 3683820 3683837 NR3C1 JASPAR yes 112144537
chr19 3683820 3683837 NR3C2 JASPAR yes 112144538
chr19 3683836 3683851 AR JASPAR yes 70788273
chr19 3683836 3683851 AR JASPAR yes 112144539
chr19 3683849 3683859 SP1 JASPAR yes 70788274
chr19 3683849 3683859 SP1 JASPAR yes 112144540
chr19 3683854 3683864 MZF1 JASPAR yes 70788275
chr19 3683854 3683864 MZF1 JASPAR yes 112144541
chr19 3683857 3683863 SP1 TRANSFAC yes 70788276
chr19 3683857 3683863 SP1 TRANSFAC yes 112144542
chr19 3683857 3683870 TFAP2A JASPAR yes 70788277
chr19 3683857 3683870 TFAP2B JASPAR yes 70788278
chr19 3683857 3683870 TFAP2C JASPAR yes 70788279
chr19 3683857 3683870 TFAP2A JASPAR yes 112144543
chr19 3683857 3683870 TFAP2B JASPAR yes 112144544
chr19 3683857 3683870 TFAP2C JASPAR yes 112144545
chr19 3683865 3683869 LFA1 TRANSFAC yes 70788280
chr19 3683865 3683869 LFA1 TRANSFAC yes 112144546
chr19 3683865 3683875 NFKB1 JASPAR yes 70788281
chr19 3683865 3683875 NFKB1 JASPAR yes 112144547
chr19 3683871 3683891 RREB1 JASPAR yes 70788282
chr19 3683871 3683891 RREB1 JASPAR yes 112144548
chr19 3683873 3683881 TBX5 JASPAR yes 70788283
chr19 3683873 3683881 TBX5 JASPAR yes 112144549
chr19 3683873 3683893 RREB1 JASPAR yes 70788284
chr19 3683873 3683893 RREB1 JASPAR yes 112144550
chr19 3683878 3683888 ZNF740 JASPAR yes 70788285
chr19 3683878 3683888 ZNF740 JASPAR yes 112144551
chr19 3683901 3683911 MZF1 JASPAR yes 70788286
chr19 3683901 3683911 MZF1 JASPAR yes 112144552
chr19 3683904 3683910 SP1 TRANSFAC yes 70788287
chr19 3683904 3683910 SP1 TRANSFAC yes 112144553
chr19 3683904 3683917 TFAP2A JASPAR yes 70788288
chr19 3683904 3683917 TFAP2B JASPAR yes 70788289
chr19 3683904 3683917 TFAP2C JASPAR yes 70788290
chr19 3683904 3683917 TFAP2A JASPAR yes 112144554
chr19 3683904 3683917 TFAP2B JASPAR yes 112144555
chr19 3683904 3683917 TFAP2C JASPAR yes 112144556
chr19 3683912 3683916 LFA1 TRANSFAC yes 70788291
chr19 3683912 3683916 LFA1 TRANSFAC yes 112144557
chr19 3683912 3683922 NFKB1 JASPAR yes 70788292
chr19 3683912 3683922 NFKB1 JASPAR yes 112144558
chr19 3683918 3683932 PLAG1 JASPAR yes 70788293
chr19 3683918 3683932 PLAG1 JASPAR yes 112144559
chr19 3683922 3683932 SP1 JASPAR yes 70788294
chr19 3683922 3683932 ZNF740 JASPAR yes 70788295
chr19 3683922 3683932 SP1 JASPAR yes 112144560
chr19 3683922 3683932 ZNF740 JASPAR yes 112144561
chr19 3683923 3683933 ZNF740 JASPAR yes 70788296
chr19 3683923 3683933 ZNF740 JASPAR yes 112144562
chr19 3683924 3683934 SP1 JASPAR yes 70788297
chr19 3683924 3683934 ZNF740 JASPAR yes 70788298
chr19 3683924 3683934 SP1 JASPAR yes 112144563
chr19 3683924 3683934 ZNF740 JASPAR yes 112144564
chr19 3683925 3683935 SP1 JASPAR yes 70788299
chr19 3683925 3683935 ZNF740 JASPAR yes 70788300
chr19 3683925 3683935 SP1 JASPAR yes 112144565
chr19 3683925 3683935 ZNF740 JASPAR yes 112144566
chr19 3683925 3683939 GLIS2 JASPAR yes 70788301
chr19 3683925 3683939 GLIS2 JASPAR yes 112144567
chr19 3683943 3683953 SP1 JASPAR yes 70788302
chr19 3683943 3683953 SP1 JASPAR yes 112144568
chr19 3683945 3683956 ELK4 JASPAR yes 70788303
chr19 3683945 3683956 FLI1 JASPAR yes 70788304
chr19 3683945 3683956 ELK4 JASPAR yes 112144569
chr19 3683945 3683956 FLI1 JASPAR yes 112144570
chr19 3683946 3683956 ETV6 JASPAR yes 70788305
chr19 3683946 3683956 ETV6 JASPAR yes 112144571
chr19 3683946 3683959 ELF1 JASPAR yes 70788306
chr19 3683946 3683959 ELF1 JASPAR yes 112144572
chr19 3683949 3683956 SPIB JASPAR yes 70788307
chr19 3683949 3683956 SPIB JASPAR yes 112144573
chr19 3683959 3683963 LFA1 TRANSFAC yes 70788308
chr19 3683959 3683963 LFA1 TRANSFAC yes 112144574
chr19 3683959 3683969 NFKB1 JASPAR yes 70788309
chr19 3683959 3683969 NFKB1 JASPAR yes 112144575
chr19 3683967 3683975 TBX5 JASPAR yes 70788310
chr19 3683967 3683975 TBX5 JASPAR yes 112144576
chr19 3683986 3684000 GLIS3 JASPAR yes 70788311
chr19 3683986 3684000 GLIS3 JASPAR yes 112144577
chr19 3683988 3684008 RREB1 JASPAR yes 70788312
chr19 3683988 3684008 RREB1 JASPAR yes 112144578
chr19 3683991 3684012 REST JASPAR yes 70788313
chr19 3683991 3684012 REST JASPAR yes 112144579
chr19 3683992 3684011 REST JASPAR yes 70788314
chr19 3683992 3684011 REST JASPAR yes 112144580
chr19 3684002 3684020 MAFF JASPAR yes 70788315
chr19 3684002 3684020 MAFF JASPAR yes 112144581
chr19 3684010 3684017 JUN TRANSFAC yes 70788316
chr19 3684010 3684017 JUN TRANSFAC yes 112144582
chr19 3684016 3684020 NFE TRANSFAC yes 70788317
chr19 3684016 3684020 NFE TRANSFAC yes 112144583
chr19 3684033 3684052 REST JASPAR yes 70788318
chr19 3684033 3684052 REST JASPAR yes 112144584
chr19 3684035 3684049 GLIS2 JASPAR yes 70788319
chr19 3684035 3684049 GLIS2 JASPAR yes 112144585
SNP sites on vista28313[chr19:3683675-3684043]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 3683695 rs546293862 C A,T no 5396553
chr19 3683739 rs575320292 G T
ESR1 ESR2 SP1 TFAP2B
5396554
chr19 3683788 rs561145157 T C no 5396555
chr19 3683854 rs190170711 G A
MZF1 SP1
5396556
chr19 3683886 rs551515876 C A
RREB1 ZNF740
5396557
chr19 3683889 rs10407632 A G
RREB1
5396558
chr19 3683928 rs10407023 C T
GLIS2 PLAG1 SP1 ZNF740
5396559
chr19 3683933 rs553206744 C A
GLIS2 SP1 ZNF740
5396560
chr19 3683995 rs10407872 A G
GLIS3 REST RREB1
5396561
chr19 3684027 rs575382327 A G,T
RUNX3
5396562
chr19 3684036 rs10410889 G A
GLIS2 REST RUNX3
5396563
Genes possibly regulated by vista28313[chr19:3683675-3684043]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 3585551 3593539 + GIPC3 ENSG00000179855.5 3585551 0.78 0.94 16812 1876
chr19 3594504 3606838 - TBXA2R ENSG00000006638.7 3606838 0.76 1.0 16813 23163
chr19 3610639 3626813 - CACTIN ENSG00000105298.9 3626813 0.64 1.0 16814 43138
chr19 3630181 3700477 - PIP5K1C ENSG00000186111.4 3700477 0.79 1.0 16815 83566
chr19 3708107 3750811 + TJP3 ENSG00000105289.10 3708107 0.78 1.0 16816 75936
chr19 3750817 3761697 - APBA3 ENSG00000011132.7 3761697 0.55 1.0 16817 22346
chr19 3762662 3768573 + MRPL54 ENSG00000183617.4 3762662 0.59 0.99 16818 21381
chr19 3769087 3772233 - RAX2 ENSG00000173976.11 3772233 0.98 1.0 16819 11810
Expression level of Genes
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miRNAs possibly regulated by vista28313[chr19:3683675-3684043]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results