EnhancerDB
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  3. vista28314[chr19:3684195-3684491]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28314[chr19:3684195-3684491]
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Tissue distribution of vista28314
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Transcription factor that possibly regulate vista28314[chr19:3684195-3684491]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 3684025 3684381 RUNX3 UCSC Txn Factor no Conserved 108368478
chr19 3684025 3684381 RUNX3 UCSC Txn Factor no Conserved 108368479
chr19 3684084 3684364 PAX5 UCSC Txn Factor no Conserved 108368493
chr19 3684120 3684401 ATF2 UCSC Txn Factor no Conserved 108368503
chr19 3684148 3684404 EGR1 UCSC Txn Factor no Conserved 108368510
chr19 3684198 3684201 MYB TRANSFAC yes 70788320
chr19 3684198 3684201 MYB TRANSFAC yes 112144597
chr19 3684207 3684221 PAX6 JASPAR yes 70788321
chr19 3684207 3684221 PAX6 JASPAR yes 112144598
chr19 3684209 3684223 PAX6 JASPAR yes 70788322
chr19 3684209 3684223 PAX6 JASPAR yes 112144599
chr19 3684221 3684225 YY1 TRANSFAC yes 70788323
chr19 3684221 3684225 YY1 TRANSFAC yes 112144600
chr19 3684232 3684244 MEF2A JASPAR yes 70788324
chr19 3684232 3684244 MEF2A JASPAR yes 112144601
chr19 3684233 3684243 MEF2A JASPAR yes 70788325
chr19 3684233 3684243 MEF2A JASPAR yes 112144602
chr19 3684234 3684238 TEAD2 TRANSFAC yes 70788326
chr19 3684234 3684238 TEAD2 TRANSFAC yes 112144603
chr19 3684234 3684244 ALX3 JASPAR yes 70788327
chr19 3684234 3684244 MEOX2 JASPAR yes 70788328
chr19 3684234 3684244 MNX1 JASPAR yes 70788329
chr19 3684234 3684244 ALX3 JASPAR yes 112144604
chr19 3684234 3684244 MEOX2 JASPAR yes 112144605
chr19 3684234 3684244 MNX1 JASPAR yes 112144606
chr19 3684235 3684243 LBX1 JASPAR yes 70788330
chr19 3684235 3684243 PDX1 JASPAR yes 70788331
chr19 3684235 3684243 VAX1 JASPAR yes 70788332
chr19 3684235 3684243 VAX2 JASPAR yes 70788333
chr19 3684235 3684243 VSX1 JASPAR yes 70788334
chr19 3684235 3684243 VSX2 JASPAR yes 70788335
chr19 3684235 3684243 LBX1 JASPAR yes 112144607
chr19 3684235 3684243 PDX1 JASPAR yes 112144608
chr19 3684235 3684243 VAX1 JASPAR yes 112144609
chr19 3684235 3684243 VAX2 JASPAR yes 112144610
chr19 3684235 3684243 VSX1 JASPAR yes 112144611
chr19 3684235 3684243 VSX2 JASPAR yes 112144612
chr19 3684249 3684264 JUND JASPAR yes 70788336
chr19 3684249 3684264 JUND JASPAR yes 112144613
chr19 3684250 3684263 JUN JASPAR yes 70788337
chr19 3684250 3684263 JUN JASPAR yes 112144614
chr19 3684252 3684267 JUND JASPAR yes 70788338
chr19 3684252 3684267 JUND JASPAR yes 112144615
chr19 3684253 3684266 JUN JASPAR yes 70788339
chr19 3684253 3684266 JUN JASPAR yes 112144616
chr19 3684254 3684261 JUN TRANSFAC yes 70788340
chr19 3684254 3684261 JUN TRANSFAC yes 112144617
chr19 3684265 3684270 SP1 TRANSFAC yes 70788341
chr19 3684265 3684270 SP1 TRANSFAC yes 112144618
chr19 3684265 3684271 SP1 TRANSFAC yes 70788342
chr19 3684265 3684271 SP1 TRANSFAC yes 112144619
chr19 3684265 3684272 SP1 TRANSFAC yes 70788343
chr19 3684265 3684272 SP1 TRANSFAC yes 112144620
chr19 3684266 3684281 NR2C2 JASPAR yes 70788344
chr19 3684266 3684281 NR2C2 JASPAR yes 112144621
chr19 3684266 3684286 RREB1 JASPAR yes 70788345
chr19 3684266 3684286 RREB1 JASPAR yes 112144622
chr19 3684269 3684279 SP1 JASPAR yes 70788346
chr19 3684269 3684279 SP1 JASPAR yes 112144623
chr19 3684271 3684291 RREB1 JASPAR yes 70788347
chr19 3684271 3684291 RREB1 JASPAR yes 112144624
chr19 3684272 3684282 SREBF1 JASPAR yes 70788348
chr19 3684272 3684282 SREBF2 JASPAR yes 70788349
chr19 3684272 3684282 SREBF1 JASPAR yes 112144625
chr19 3684272 3684282 SREBF2 JASPAR yes 112144626
chr19 3684274 3684289 RUNX2 JASPAR yes 70788350
chr19 3684274 3684289 RUNX2 JASPAR yes 112144627
chr19 3684275 3684295 RREB1 JASPAR yes 70788351
chr19 3684275 3684295 RREB1 JASPAR yes 112144628
chr19 3684281 3684297 ZNF143 JASPAR yes 70788352
chr19 3684281 3684297 ZNF143 JASPAR yes 112144629
chr19 3684313 3684329 T JASPAR yes 70788353
chr19 3684313 3684329 T JASPAR yes 112144630
chr19 3684324 3684329 TFAP2A TRANSFAC yes 70788354
chr19 3684324 3684329 TFAP2A TRANSFAC yes 112144631
chr19 3684324 3684330 MZF1 JASPAR yes 70788355
chr19 3684324 3684330 MZF1 JASPAR yes 112144632
chr19 3684324 3684343 CTCF JASPAR yes 70788356
chr19 3684324 3684343 CTCF JASPAR yes 112144633
chr19 3684328 3684338 ID4 JASPAR yes 70788357
chr19 3684328 3684338 MSC JASPAR yes 70788358
chr19 3684328 3684338 TCF3 JASPAR yes 70788359
chr19 3684328 3684338 TCF4 JASPAR yes 70788360
chr19 3684328 3684338 ID4 JASPAR yes 112144634
chr19 3684328 3684338 MSC JASPAR yes 112144635
chr19 3684328 3684338 TCF3 JASPAR yes 112144636
chr19 3684328 3684338 TCF4 JASPAR yes 112144637
chr19 3684329 3684338 SNAI2 JASPAR yes 70788361
chr19 3684329 3684338 SNAI2 JASPAR yes 112144638
chr19 3684330 3684335 USF2 TRANSFAC yes 70788362
chr19 3684330 3684335 USF2 TRANSFAC yes 112144639
chr19 3684347 3684351 H4TF2 TRANSFAC yes 70788363
chr19 3684347 3684351 H4TF2 TRANSFAC yes 112144640
chr19 3684353 3684374 REST JASPAR yes 70788364
chr19 3684353 3684374 REST JASPAR yes 112144641
chr19 3684362 3684372 SP1 JASPAR yes 70788365
chr19 3684362 3684372 SP1 JASPAR yes 112144642
chr19 3684377 3684382 ETS2 TRANSFAC yes 70788366
chr19 3684377 3684382 ETS2 TRANSFAC yes 112144643
chr19 3684378 3684392 SPIC JASPAR yes 70788367
chr19 3684378 3684392 SPIC JASPAR yes 112144644
chr19 3684395 3684400 SP1 TRANSFAC yes 70788368
chr19 3684395 3684400 SP1 TRANSFAC yes 112144645
chr19 3684396 3684401 SP1 TRANSFAC yes 70788369
chr19 3684396 3684401 SP1 TRANSFAC yes 112144646
chr19 3684413 3684428 NFYB JASPAR yes 70788370
chr19 3684413 3684428 NFYB JASPAR yes 112144647
chr19 3684415 3684431 NFYA JASPAR yes 70788371
chr19 3684415 3684431 NFYA JASPAR yes 112144648
chr19 3684416 3684434 NFYA JASPAR yes 70788372
chr19 3684416 3684434 NFYA JASPAR yes 112144649
chr19 3684420 3684424 H1TF2 TRANSFAC yes 70788373
chr19 3684420 3684424 NFE TRANSFAC yes 70788374
chr19 3684420 3684424 SRF TRANSFAC yes 70788375
chr19 3684420 3684424 H1TF2 TRANSFAC yes 112144650
chr19 3684420 3684424 NFE TRANSFAC yes 112144651
chr19 3684420 3684424 SRF TRANSFAC yes 112144652
chr19 3684422 3684433 USF1 JASPAR yes 70788376
chr19 3684422 3684433 USF2 JASPAR yes 70788377
chr19 3684422 3684433 USF1 JASPAR yes 112144653
chr19 3684422 3684433 USF2 JASPAR yes 112144654
chr19 3684423 3684433 MLXIPL JASPAR yes 70788378
chr19 3684423 3684433 SREBF2 JASPAR yes 70788379
chr19 3684423 3684433 TFE3 JASPAR yes 70788380
chr19 3684423 3684433 TFEB JASPAR yes 70788381
chr19 3684423 3684433 TFEC JASPAR yes 70788382
chr19 3684423 3684433 MLXIPL JASPAR yes 112144655
chr19 3684423 3684433 SREBF2 JASPAR yes 112144656
chr19 3684423 3684433 TFE3 JASPAR yes 112144657
chr19 3684423 3684433 TFEB JASPAR yes 112144658
chr19 3684423 3684433 TFEC JASPAR yes 112144659
chr19 3684455 3684468 ATF4 JASPAR yes 70788383
chr19 3684455 3684468 ATF4 JASPAR yes 112144660
chr19 3684455 3684476 ZNF263 JASPAR yes 70788384
chr19 3684455 3684476 ZNF263 JASPAR yes 112144661
chr19 3684470 3684487 BCL6B JASPAR yes 70788385
chr19 3684470 3684487 BCL6B JASPAR yes 112144662
SNP sites on vista28314[chr19:3684195-3684491]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 3684463 rs552194376 T C
ATF4 ZNF263
5396565
chr19 3684475 rs76556268 C T
BCL6B ZNF263
5396566
Genes possibly regulated by vista28314[chr19:3684195-3684491]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 3585551 3593539 + GIPC3 ENSG00000179855.5 3585551 0.78 0.94 16812 1356
chr19 3594504 3606838 - TBXA2R ENSG00000006638.7 3606838 0.76 1.0 16813 22643
chr19 3610639 3626813 - CACTIN ENSG00000105298.9 3626813 0.64 1.0 16814 42618
chr19 3630181 3700477 - PIP5K1C ENSG00000186111.4 3700477 0.79 1.0 16815 84014
chr19 3708107 3750811 + TJP3 ENSG00000105289.10 3708107 0.78 1.0 16816 76384
chr19 3750817 3761697 - APBA3 ENSG00000011132.7 3761697 0.55 1.0 16817 22794
chr19 3762662 3768573 + MRPL54 ENSG00000183617.4 3762662 0.59 0.99 16818 21829
chr19 3769087 3772233 - RAX2 ENSG00000173976.11 3772233 0.98 1.0 16819 12258
Expression level of Genes
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miRNAs possibly regulated by vista28314[chr19:3684195-3684491]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results