EnhancerDB
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  3. vista28315[chr19:3687832-3687894]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28315[chr19:3687832-3687894]
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Tissue distribution of vista28315
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Transcription factor that possibly regulate vista28315[chr19:3687832-3687894]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 3687823 3687838 ZIC3 JASPAR yes 70788386
chr19 3687823 3687838 ZIC4 JASPAR yes 70788387
chr19 3687823 3687838 ZIC3 JASPAR yes 112145139
chr19 3687823 3687838 ZIC4 JASPAR yes 112145140
chr19 3687824 3687838 ZIC1 JASPAR yes 70788388
chr19 3687824 3687838 ZIC1 JASPAR yes 112145141
chr19 3687826 3687838 NHLH1 JASPAR yes 70788389
chr19 3687826 3687838 NHLH1 JASPAR yes 112145142
chr19 3687827 3687836 SNAI2 JASPAR yes 70788390
chr19 3687827 3687836 SNAI2 JASPAR yes 112145143
chr19 3687827 3687837 TCF3 JASPAR yes 70788391
chr19 3687827 3687837 TCF4 JASPAR yes 70788392
chr19 3687827 3687837 TCF3 JASPAR yes 112145144
chr19 3687827 3687837 TCF4 JASPAR yes 112145145
chr19 3687829 3687838 ZEB1 JASPAR yes 70788393
chr19 3687829 3687838 ZEB1 JASPAR yes 112145146
chr19 3687829 3687841 ZBTB7A JASPAR yes 70788394
chr19 3687829 3687841 ZBTB7A JASPAR yes 112145147
chr19 3687831 3687836 SP1 TRANSFAC yes 70788395
chr19 3687831 3687836 SP1 TRANSFAC yes 112145148
chr19 3687834 3687839 SP1 TRANSFAC yes 70788396
chr19 3687834 3687839 SP1 TRANSFAC yes 112145149
chr19 3687835 3687840 SP1 TRANSFAC yes 70788397
chr19 3687835 3687840 SP1 TRANSFAC yes 112145150
chr19 3687835 3687844 THAP1 JASPAR yes 70788398
chr19 3687835 3687844 THAP1 JASPAR yes 112145151
chr19 3687838 3687842 LFA1 TRANSFAC yes 70788399
chr19 3687838 3687842 LFA1 TRANSFAC yes 112145152
chr19 3687840 3687859 REST JASPAR yes 70788400
chr19 3687840 3687859 REST JASPAR yes 112145153
chr19 3687850 3687864 FOXF2 JASPAR yes 70788401
chr19 3687850 3687864 FOXF2 JASPAR yes 112145154
chr19 3687853 3687864 FOXP2 JASPAR yes 70788402
chr19 3687853 3687864 FOXP2 JASPAR yes 112145155
chr19 3687854 3687862 FOXO3 JASPAR yes 70788403
chr19 3687854 3687862 FOXO3 JASPAR yes 112145156
chr19 3687855 3687862 FOXD2 JASPAR yes 70788404
chr19 3687855 3687862 FOXI1 JASPAR yes 70788405
chr19 3687855 3687862 FOXL1 JASPAR yes 70788406
chr19 3687855 3687862 FOXO4 JASPAR yes 70788407
chr19 3687855 3687862 FOXO6 JASPAR yes 70788408
chr19 3687855 3687862 FOXP3 JASPAR yes 70788409
chr19 3687855 3687862 FOXD2 JASPAR yes 112145157
chr19 3687855 3687862 FOXI1 JASPAR yes 112145158
chr19 3687855 3687862 FOXL1 JASPAR yes 112145159
chr19 3687855 3687862 FOXO4 JASPAR yes 112145160
chr19 3687855 3687862 FOXO6 JASPAR yes 112145161
chr19 3687855 3687862 FOXP3 JASPAR yes 112145162
chr19 3687855 3687863 FOXD1 JASPAR yes 70788410
chr19 3687855 3687863 FOXO3 JASPAR yes 70788411
chr19 3687855 3687863 FOXD1 JASPAR yes 112145163
chr19 3687855 3687863 FOXO3 JASPAR yes 112145164
chr19 3687855 3687869 SPI1 JASPAR yes 70788412
chr19 3687855 3687869 SPIC JASPAR yes 70788413
chr19 3687855 3687869 SPI1 JASPAR yes 112145165
chr19 3687855 3687869 SPIC JASPAR yes 112145166
chr19 3687856 3687869 ELF1 JASPAR yes 70788414
chr19 3687856 3687869 ELF1 JASPAR yes 112145167
chr19 3687858 3687869 ELF5 JASPAR yes 70788415
chr19 3687858 3687869 ETV2 JASPAR yes 70788416
chr19 3687858 3687869 ELF5 JASPAR yes 112145168
chr19 3687858 3687869 ETV2 JASPAR yes 112145169
chr19 3687859 3687869 GABPA JASPAR yes 70788417
chr19 3687859 3687869 GABPA JASPAR yes 112145170
chr19 3687859 3687870 FLI1 JASPAR yes 70788418
chr19 3687859 3687870 FLI1 JASPAR yes 112145171
chr19 3687869 3687888 PAX5 JASPAR yes 70788419
chr19 3687869 3687888 PAX5 JASPAR yes 112145172
chr19 3687870 3687881 NRF1 JASPAR yes 70788420
chr19 3687870 3687881 NRF1 JASPAR yes 112145173
chr19 3687875 3687880 SP1 TRANSFAC yes 70788421
chr19 3687875 3687880 SP1 TRANSFAC yes 112145174
chr19 3687876 3687881 SP1 TRANSFAC yes 70788422
chr19 3687876 3687881 SP1 TRANSFAC yes 112145175
chr19 3687879 3687884 SP1 TRANSFAC yes 70788423
chr19 3687879 3687884 SP1 TRANSFAC yes 112145176
SNP sites on vista28315[chr19:3687832-3687894]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 3687879 rs372817522 C T
NRF1 PAX5 SP1
5396637
Genes possibly regulated by vista28315[chr19:3687832-3687894]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 3594504 3606838 - TBXA2R ENSG00000006638.7 3606838 0.76 1.0 16813 19006
chr19 3610639 3626813 - CACTIN ENSG00000105298.9 3626813 0.64 1.0 16814 38981
chr19 3630181 3700477 - PIP5K1C ENSG00000186111.4 3700477 0.79 1.0 16815 87417
chr19 3708107 3750811 + TJP3 ENSG00000105289.10 3708107 0.78 1.0 16816 79787
chr19 3750817 3761697 - APBA3 ENSG00000011132.7 3761697 0.55 1.0 16817 26197
chr19 3762662 3768573 + MRPL54 ENSG00000183617.4 3762662 0.59 0.99 16818 25232
chr19 3769087 3772233 - RAX2 ENSG00000173976.11 3772233 0.98 1.0 16819 15661
Expression level of Genes
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miRNAs possibly regulated by vista28315[chr19:3687832-3687894]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results