EnhancerDB
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  3. vista28317[chr19:3812391-3812689]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28317[chr19:3812391-3812689]
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Tissue distribution of vista28317
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Transcription factor that possibly regulate vista28317[chr19:3812391-3812689]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 3812354 3812739 EGR1 UCSC Txn Factor no Conserved 108368678
chr19 3812403 3812409 MZF1 JASPAR yes 70788444
chr19 3812403 3812409 MZF1 JASPAR yes 112150802
chr19 3812416 3812431 TFAP2C JASPAR yes 70788445
chr19 3812416 3812431 TFAP2C JASPAR yes 112150803
chr19 3812421 3812426 TFAP2A TRANSFAC yes 70788446
chr19 3812421 3812426 TFAP2A TRANSFAC yes 112150804
chr19 3812421 3812427 MZF1 JASPAR yes 70788447
chr19 3812421 3812427 MZF1 JASPAR yes 112150805
chr19 3812421 3812442 ZNF263 JASPAR yes 70788448
chr19 3812421 3812442 ZNF263 JASPAR yes 112150806
chr19 3812423 3812436 ELF1 JASPAR yes 70788449
chr19 3812423 3812436 ELF1 JASPAR yes 112150807
chr19 3812426 3812433 SPIB JASPAR yes 70788450
chr19 3812426 3812433 SPIB JASPAR yes 112150808
chr19 3812426 3812436 ETV6 JASPAR yes 70788451
chr19 3812426 3812436 ETV6 JASPAR yes 112150809
chr19 3812426 3812437 ELK4 JASPAR yes 70788452
chr19 3812426 3812437 FLI1 JASPAR yes 70788453
chr19 3812426 3812437 ELK4 JASPAR yes 112150810
chr19 3812426 3812437 FLI1 JASPAR yes 112150811
chr19 3812426 3812447 ZNF263 JASPAR yes 70788454
chr19 3812426 3812447 ZNF263 JASPAR yes 112150812
chr19 3812427 3812448 ZNF263 JASPAR yes 70788455
chr19 3812427 3812448 ZNF263 JASPAR yes 112150813
chr19 3812429 3812439 SP1 JASPAR yes 70788456
chr19 3812429 3812439 SP1 JASPAR yes 112150814
chr19 3812436 3812453 RARA JASPAR yes 70788457
chr19 3812436 3812453 RARA JASPAR yes 112150815
chr19 3812437 3812441 LFA1 TRANSFAC yes 70788458
chr19 3812437 3812441 LFA1 TRANSFAC yes 112150816
chr19 3812450 3812463 ELF1 JASPAR yes 70788459
chr19 3812450 3812463 ELF1 JASPAR yes 112150817
chr19 3812452 3812463 ETV2 JASPAR yes 70788460
chr19 3812452 3812463 ETV2 JASPAR yes 112150818
chr19 3812453 3812463 ELK1 JASPAR yes 70788461
chr19 3812453 3812463 ELK3 JASPAR yes 70788462
chr19 3812453 3812463 ERF JASPAR yes 70788463
chr19 3812453 3812463 ERG JASPAR yes 70788464
chr19 3812453 3812463 ETS1 JASPAR yes 70788465
chr19 3812453 3812463 ETV1 JASPAR yes 70788466
chr19 3812453 3812463 ETV3 JASPAR yes 70788467
chr19 3812453 3812463 ETV4 JASPAR yes 70788468
chr19 3812453 3812463 ETV6 JASPAR yes 70788469
chr19 3812453 3812463 FEV JASPAR yes 70788470
chr19 3812453 3812463 FLI1 JASPAR yes 70788471
chr19 3812453 3812463 GABPA JASPAR yes 70788472
chr19 3812453 3812463 ELK1 JASPAR yes 112150819
chr19 3812453 3812463 ELK3 JASPAR yes 112150820
chr19 3812453 3812463 ERF JASPAR yes 112150821
chr19 3812453 3812463 ERG JASPAR yes 112150822
chr19 3812453 3812463 ETS1 JASPAR yes 112150823
chr19 3812453 3812463 ETV1 JASPAR yes 112150824
chr19 3812453 3812463 ETV3 JASPAR yes 112150825
chr19 3812453 3812463 ETV4 JASPAR yes 112150826
chr19 3812453 3812463 ETV6 JASPAR yes 112150827
chr19 3812453 3812463 FEV JASPAR yes 112150828
chr19 3812453 3812463 FLI1 JASPAR yes 112150829
chr19 3812453 3812463 GABPA JASPAR yes 112150830
chr19 3812453 3812464 ELK4 JASPAR yes 70788473
chr19 3812453 3812464 FLI1 JASPAR yes 70788474
chr19 3812453 3812464 ELK4 JASPAR yes 112150831
chr19 3812453 3812464 FLI1 JASPAR yes 112150832
chr19 3812454 3812462 EHF JASPAR yes 70788475
chr19 3812454 3812462 FEV JASPAR yes 70788476
chr19 3812454 3812462 EHF JASPAR yes 112150833
chr19 3812454 3812462 FEV JASPAR yes 112150834
chr19 3812455 3812462 SPI1 JASPAR yes 70788477
chr19 3812455 3812462 SPI1 JASPAR yes 112150835
chr19 3812463 3812475 TEAD1 JASPAR yes 70788478
chr19 3812463 3812475 TEAD1 JASPAR yes 112150836
chr19 3812465 3812479 GLIS2 JASPAR yes 70788479
chr19 3812465 3812479 GLIS2 JASPAR yes 112150837
chr19 3812473 3812480 SP1 TRANSFAC yes 70788480
chr19 3812473 3812480 SP1 TRANSFAC yes 112150838
chr19 3812475 3812480 SP1 TRANSFAC yes 70788481
chr19 3812475 3812480 SP1 TRANSFAC yes 112150839
chr19 3812495 3812499 NFE TRANSFAC yes 70788482
chr19 3812495 3812499 NFE TRANSFAC yes 112150840
chr19 3812506 3812510 NFE TRANSFAC yes 70788483
chr19 3812506 3812510 NFE TRANSFAC yes 112150841
chr19 3812521 3812526 H4TF1 TRANSFAC yes 70788484
chr19 3812521 3812526 H4TF1 TRANSFAC yes 112150842
chr19 3812521 3812531 ERG JASPAR yes 70788485
chr19 3812521 3812531 ETS1 JASPAR yes 70788486
chr19 3812521 3812531 ERG JASPAR yes 112150843
chr19 3812521 3812531 ETS1 JASPAR yes 112150844
chr19 3812521 3812532 ETV2 JASPAR yes 70788487
chr19 3812521 3812532 ETV2 JASPAR yes 112150845
chr19 3812523 3812529 ETS1 JASPAR yes 70788488
chr19 3812523 3812529 ETS1 JASPAR yes 112150846
chr19 3812527 3812541 BATF3 JASPAR yes 70788489
chr19 3812527 3812541 BATF3 JASPAR yes 112150847
chr19 3812565 3812569 NFE TRANSFAC yes 70788490
chr19 3812565 3812569 NFE TRANSFAC yes 112150848
chr19 3812580 3812594 RXRB JASPAR yes 70788491
chr19 3812580 3812594 RXRG JASPAR yes 70788492
chr19 3812580 3812594 RXRB JASPAR yes 112150849
chr19 3812580 3812594 RXRG JASPAR yes 112150850
chr19 3812580 3812595 NR2C2 JASPAR yes 70788493
chr19 3812580 3812595 NR2C2 JASPAR yes 112150851
chr19 3812587 3812590 MYB TRANSFAC yes 70788494
chr19 3812587 3812590 MYB TRANSFAC yes 112150852
chr19 3812590 3812597 SP1 TRANSFAC yes 70788495
chr19 3812590 3812597 SP1 TRANSFAC yes 112150853
chr19 3812591 3812596 SP1 TRANSFAC yes 70788496
chr19 3812591 3812596 SP1 TRANSFAC yes 112150854
chr19 3812591 3812597 SP1 TRANSFAC yes 70788497
chr19 3812591 3812597 SP1 TRANSFAC yes 112150855
chr19 3812591 3812598 SP1 TRANSFAC yes 70788498
chr19 3812591 3812598 SP1 TRANSFAC yes 112150856
chr19 3812606 3812627 ZNF263 JASPAR yes 70788499
chr19 3812606 3812627 ZNF263 JASPAR yes 112150857
chr19 3812612 3812618 MZF1 JASPAR yes 70788500
chr19 3812612 3812618 MZF1 JASPAR yes 112150858
chr19 3812612 3812633 ZNF263 JASPAR yes 70788501
chr19 3812612 3812633 ZNF263 JASPAR yes 112150859
chr19 3812614 3812624 SP1 JASPAR yes 70788502
chr19 3812614 3812624 SP1 JASPAR yes 112150860
chr19 3812628 3812632 YY1 TRANSFAC yes 70788503
chr19 3812628 3812632 YY1 TRANSFAC yes 112150861
chr19 3812652 3812660 E2F1 JASPAR yes 70788504
chr19 3812652 3812660 E2F1 JASPAR yes 112150862
chr19 3812671 3812677 MZF1 JASPAR yes 70788505
chr19 3812671 3812677 MZF1 JASPAR yes 112150863
chr19 3812681 3812688 NKX3-1 JASPAR yes 70788506
chr19 3812681 3812688 NKX3-1 JASPAR yes 112150864
SNP sites on vista28317[chr19:3812391-3812689]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 3812408 rs77342266 C T
EGR1 MZF1
5397348
chr19 3812466 rs1468297 C G
EGR1 GLIS2 TEAD1
5397349
chr19 3812479 rs10422115 C T
EGR1 GLIS2 SP1
5397350
chr19 3812594 rs112011779 G A
EGR1 NR2C2 RXRB RXRG SP1
5397351
Genes possibly regulated by vista28317[chr19:3812391-3812689]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 3750817 3761697 - APBA3 ENSG00000011132.7 3761697 0.55 1.0 16817 49306
chr19 3762662 3768573 + MRPL54 ENSG00000183617.4 3762662 0.59 0.99 16818 50271
chr19 3769087 3772233 - RAX2 ENSG00000173976.11 3772233 0.98 1.0 16819 59842
chr19 3777971 3802127 - MATK ENSG00000007264.9 3802127 0.94 0.91 16820 89736
chr19 3804022 3869030 - ZFR2 ENSG00000105278.6 3869030 0.91 1.0 16821 43659
chr19 3879862 3928077 + ATCAY ENSG00000167654.13 3879862 0.94 0.98 16822 32827
Expression level of Genes
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miRNAs possibly regulated by vista28317[chr19:3812391-3812689]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results