EnhancerDB
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  3. vista28324[chr19:4052414-4052757]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28324[chr19:4052414-4052757]
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Tissue distribution of vista28324
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Transcription factor that possibly regulate vista28324[chr19:4052414-4052757]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 4052663 4052903 HNF4G UCSC Txn Factor no Conserved 108369166
chr19 4052403 4052416 SMAD2 JASPAR yes 70788724
chr19 4052403 4052416 SMAD2 JASPAR yes 112156788
chr19 4052418 4052429 ESRRA JASPAR yes 70788725
chr19 4052418 4052429 ESRRA JASPAR yes 112156789
chr19 4052419 4052434 HNF4A JASPAR yes 70788726
chr19 4052419 4052434 HNF4A JASPAR yes 112156790
chr19 4052420 4052434 PLAG1 JASPAR yes 70788727
chr19 4052420 4052434 RXRB JASPAR yes 70788728
chr19 4052420 4052434 RXRG JASPAR yes 70788729
chr19 4052420 4052434 PLAG1 JASPAR yes 112156791
chr19 4052420 4052434 RXRB JASPAR yes 112156792
chr19 4052420 4052434 RXRG JASPAR yes 112156793
chr19 4052420 4052435 HNF4G JASPAR yes 70788730
chr19 4052420 4052435 NR2C2 JASPAR yes 70788731
chr19 4052420 4052435 HNF4G JASPAR yes 112156794
chr19 4052420 4052435 NR2C2 JASPAR yes 112156795
chr19 4052427 4052439 INSM1 JASPAR yes 70788732
chr19 4052427 4052439 INSM1 JASPAR yes 112156796
chr19 4052433 4052446 SMAD2 JASPAR yes 70788733
chr19 4052433 4052446 SMAD2 JASPAR yes 112156797
chr19 4052468 4052487 CTCF JASPAR yes 70788734
chr19 4052468 4052487 CTCF JASPAR yes 112156798
chr19 4052470 4052478 EHF JASPAR yes 70788735
chr19 4052470 4052478 EHF JASPAR yes 112156799
chr19 4052472 4052479 SPIB JASPAR yes 70788736
chr19 4052472 4052479 SPIB JASPAR yes 112156800
chr19 4052489 4052494 TFAP2A TRANSFAC yes 70788737
chr19 4052489 4052494 TFAP2A TRANSFAC yes 112156801
chr19 4052489 4052495 MZF1 JASPAR yes 70788738
chr19 4052489 4052495 MZF1 JASPAR yes 112156802
chr19 4052489 4052499 SP1 JASPAR yes 70788739
chr19 4052489 4052499 SP1 JASPAR yes 112156803
chr19 4052490 4052500 SP1 JASPAR yes 70788740
chr19 4052490 4052500 SP1 JASPAR yes 112156804
chr19 4052491 4052497 MAZ TRANSFAC yes 70788741
chr19 4052491 4052497 MAZ TRANSFAC yes 112156805
chr19 4052492 4052513 REST JASPAR yes 70788742
chr19 4052492 4052513 REST JASPAR yes 112156806
chr19 4052496 4052501 SP1 TRANSFAC yes 70788743
chr19 4052496 4052501 SP1 TRANSFAC yes 112156807
chr19 4052496 4052503 SP1 TRANSFAC yes 70788744
chr19 4052496 4052503 SP1 TRANSFAC yes 112156808
chr19 4052496 4052506 SP1 JASPAR yes 70788745
chr19 4052496 4052506 SP1 JASPAR yes 112156809
chr19 4052509 4052514 TFAP2A TRANSFAC yes 70788746
chr19 4052509 4052514 TFAP2A TRANSFAC yes 112156810
chr19 4052509 4052515 MZF1 JASPAR yes 70788747
chr19 4052509 4052515 MZF1 JASPAR yes 112156811
chr19 4052509 4052519 SP1 JASPAR yes 70788748
chr19 4052509 4052519 SP1 JASPAR yes 112156812
chr19 4052511 4052517 MAZ TRANSFAC yes 70788749
chr19 4052511 4052517 MAZ TRANSFAC yes 112156813
chr19 4052517 4052521 ESR1 TRANSFAC yes 70788750
chr19 4052517 4052521 ESR1 TRANSFAC yes 112156814
chr19 4052532 4052536 NFE TRANSFAC yes 70788751
chr19 4052532 4052536 NFE TRANSFAC yes 112156815
chr19 4052535 4052541 MZF1 JASPAR yes 70788752
chr19 4052535 4052541 MZF1 JASPAR yes 112156816
chr19 4052542 4052552 SP1 JASPAR yes 70788753
chr19 4052542 4052552 SP1 JASPAR yes 112156817
chr19 4052544 4052549 SP1 TRANSFAC yes 70788754
chr19 4052544 4052549 SP1 TRANSFAC yes 112156818
chr19 4052553 4052558 ETS2 TRANSFAC yes 70788755
chr19 4052553 4052558 ETS2 TRANSFAC yes 112156819
chr19 4052562 4052571 SOX9 JASPAR yes 70788756
chr19 4052562 4052571 SOX9 JASPAR yes 112156820
chr19 4052585 4052597 ZBTB7B JASPAR yes 70788757
chr19 4052585 4052597 ZBTB7C JASPAR yes 70788758
chr19 4052585 4052597 ZBTB7B JASPAR yes 112156821
chr19 4052585 4052597 ZBTB7C JASPAR yes 112156822
chr19 4052586 4052598 ZBTB7A JASPAR yes 70788759
chr19 4052586 4052598 ZBTB7A JASPAR yes 112156823
chr19 4052586 4052606 RREB1 JASPAR yes 70788760
chr19 4052586 4052606 RREB1 JASPAR yes 112156824
chr19 4052588 4052593 SP1 TRANSFAC yes 70788761
chr19 4052588 4052593 SP1 TRANSFAC yes 112156825
chr19 4052596 4052608 INSM1 JASPAR yes 70788762
chr19 4052596 4052608 INSM1 JASPAR yes 112156826
chr19 4052600 4052613 NFKB1 JASPAR yes 70788763
chr19 4052600 4052613 NFKB2 JASPAR yes 70788764
chr19 4052600 4052613 NFKB1 JASPAR yes 112156827
chr19 4052600 4052613 NFKB2 JASPAR yes 112156828
chr19 4052601 4052614 NFKB1 JASPAR yes 70788765
chr19 4052601 4052614 NFKB1 JASPAR yes 112156829
chr19 4052602 4052613 NFKB1 JASPAR yes 70788766
chr19 4052602 4052613 NFKB1 JASPAR yes 112156830
chr19 4052603 4052613 RELA JASPAR yes 70788767
chr19 4052603 4052613 RELA JASPAR yes 112156831
chr19 4052606 4052618 TFAP2A JASPAR yes 70788768
chr19 4052606 4052618 TFAP2B JASPAR yes 70788769
chr19 4052606 4052618 TFAP2C JASPAR yes 70788770
chr19 4052606 4052618 TFAP2A JASPAR yes 112156832
chr19 4052606 4052618 TFAP2B JASPAR yes 112156833
chr19 4052606 4052618 TFAP2C JASPAR yes 112156834
chr19 4052608 4052617 TFAP2A JASPAR yes 70788771
chr19 4052608 4052617 TFAP2A JASPAR yes 112156835
chr19 4052612 4052618 SP1 TRANSFAC yes 70788772
chr19 4052612 4052618 SP1 TRANSFAC yes 112156836
chr19 4052612 4052622 SP1 TRANSFAC yes 70788773
chr19 4052612 4052622 SP1 TRANSFAC yes 112156837
chr19 4052613 4052618 SP1 TRANSFAC yes 70788774
chr19 4052613 4052618 SP1 TRANSFAC yes 112156838
chr19 4052614 4052619 SP1 TRANSFAC yes 70788775
chr19 4052614 4052619 SP1 TRANSFAC yes 112156839
chr19 4052617 4052622 SP1 TRANSFAC yes 70788776
chr19 4052617 4052622 SP1 TRANSFAC yes 112156840
chr19 4052618 4052623 SP1 TRANSFAC yes 70788777
chr19 4052618 4052623 SP1 TRANSFAC yes 112156841
chr19 4052618 4052624 SP1 TRANSFAC yes 70788778
chr19 4052618 4052624 SP1 TRANSFAC yes 112156842
chr19 4052621 4052635 PLAG1 JASPAR yes 70788779
chr19 4052621 4052635 PLAG1 JASPAR yes 112156843
chr19 4052621 4052636 NR2C2 JASPAR yes 70788780
chr19 4052621 4052636 NR2C2 JASPAR yes 112156844
chr19 4052622 4052632 SP1 JASPAR yes 70788781
chr19 4052622 4052632 SP1 JASPAR yes 112156845
chr19 4052622 4052636 PLAG1 JASPAR yes 70788782
chr19 4052622 4052636 PLAG1 JASPAR yes 112156846
chr19 4052623 4052633 SP1 JASPAR yes 70788783
chr19 4052623 4052633 SP1 JASPAR yes 112156847
chr19 4052624 4052628 LFA1 TRANSFAC yes 70788784
chr19 4052624 4052628 LFA1 TRANSFAC yes 112156848
chr19 4052624 4052636 INSM1 JASPAR yes 70788785
chr19 4052624 4052636 INSM1 JASPAR yes 112156849
chr19 4052634 4052648 JUN JASPAR yes 70788786
chr19 4052636 4052647 BATF JASPAR yes 70788787
chr19 4052637 4052648 NFE2L2 JASPAR yes 70788788
chr19 4052638 4052649 FOS JASPAR yes 70788789
chr19 4052638 4052649 FOSL1 JASPAR yes 70788790
chr19 4052638 4052649 JUND JASPAR yes 70788791
chr19 4052639 4052650 FOSL2 JASPAR yes 70788792
chr19 4052639 4052650 JUNB JASPAR yes 70788793
chr19 4052639 4052653 JUN JASPAR yes 70788794
chr19 4052655 4052675 TP63 JASPAR yes 70788795
chr19 4052660 4052664 H4TF2 TRANSFAC yes 70788796
chr19 4052665 4052678 SMAD2 JASPAR yes 70788797
chr19 4052674 4052686 INSM1 JASPAR yes 70788798
chr19 4052674 4052689 NR2C2 JASPAR yes 70788799
chr19 4052677 4052687 SP1 JASPAR yes 70788800
chr19 4052678 4052688 SP1 JASPAR yes 70788801
chr19 4052680 4052686 NFE2 TRANSFAC yes 70788802
chr19 4052696 4052706 SP1 JASPAR yes 70788803
chr19 4052697 4052704 SP1 TRANSFAC yes 70788804
chr19 4052698 4052705 SP1 TRANSFAC yes 70788805
chr19 4052699 4052704 SP1 TRANSFAC yes 70788806
chr19 4052699 4052705 SP1 TRANSFAC yes 70788807
chr19 4052702 4052713 SPDEF JASPAR yes 70788808
chr19 4052727 4052740 ZBTB18 JASPAR yes 70788809
chr19 4052734 4052752 ESR1 JASPAR yes 70788810
SNP sites on vista28324[chr19:4052414-4052757]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 4052452 rs576648215 C A,T no 5398425
chr19 4052526 rs555490466 C T no 5398426
chr19 4052610 rs572666572 C A
NFKB1 NFKB2 RELA TFAP2A TFAP2B TFAP2C
5398427
chr19 4052621 rs565773601 C T
NR2C2 PLAG1 SP1
5398428
chr19 4052706 rs577801581 C T
HNF4G SP1 SPDEF
5398429
chr19 4052753 rs371113177 T C
HNF4G
5398430
Genes possibly regulated by vista28324[chr19:4052414-4052757]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 3958451 3971121 - DAPK3 ENSG00000167657.7 3971121 0.67 1.0 16824 18707
chr19 3976054 3985467 - EEF2 ENSG00000167658.11 3985467 0.75 1.0 16825 33053
chr19 4007644 4039384 + PIAS4 ENSG00000105229.2 4007644 0.63 1.0 16826 55230
chr19 4041127 4043154 - AC016586.1 ENSG00000205147.3 4043154 0.9 1.0 16827 90740
chr19 4044362 4066943 - ZBTB7A ENSG00000178951.4 4066943 0.77 1.0 16828 85814
chr19 4090319 4124126 - MAP2K2 ENSG00000126934.9 4124126 0.66 1.0 16829 28631
Expression level of Genes
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miRNAs possibly regulated by vista28324[chr19:4052414-4052757]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results