EnhancerDB
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  3. vista28329[chr19:4061318-4061457]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28329[chr19:4061318-4061457]
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Tissue distribution of vista28329
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Transcription factor that possibly regulate vista28329[chr19:4061318-4061457]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 4061276 4061532 CEBPB UCSC Txn Factor no Conserved 108369887
chr19 4061306 4061319 NR2F1 JASPAR yes 70789096
chr19 4061306 4061319 NR2F1 JASPAR yes 112157688
chr19 4061331 4061340 SNAI2 JASPAR yes 70789097
chr19 4061331 4061340 SNAI2 JASPAR yes 112157691
chr19 4061331 4061341 ID4 JASPAR yes 70789098
chr19 4061331 4061341 NHLH1 JASPAR yes 70789099
chr19 4061331 4061341 TCF3 JASPAR yes 70789100
chr19 4061331 4061341 TCF4 JASPAR yes 70789101
chr19 4061331 4061341 ID4 JASPAR yes 112157692
chr19 4061331 4061341 NHLH1 JASPAR yes 112157693
chr19 4061331 4061341 TCF3 JASPAR yes 112157694
chr19 4061331 4061341 TCF4 JASPAR yes 112157695
chr19 4061333 4061342 ZEB1 JASPAR yes 70789102
chr19 4061333 4061342 ZEB1 JASPAR yes 112157696
chr19 4061364 4061373 SP1 TRANSFAC yes 70789103
chr19 4061364 4061373 SP1 TRANSFAC yes 112157697
chr19 4061365 4061371 SP1 TRANSFAC yes 70789104
chr19 4061365 4061371 SP1 TRANSFAC yes 112157698
chr19 4061365 4061375 SP1 JASPAR yes 70789105
chr19 4061365 4061375 SP1 JASPAR yes 112157699
chr19 4061366 4061373 SP1 TRANSFAC yes 70789106
chr19 4061366 4061373 SP1 TRANSFAC yes 112157700
chr19 4061367 4061372 SP1 TRANSFAC yes 70789107
chr19 4061367 4061372 SP1 TRANSFAC yes 112157701
chr19 4061367 4061373 SP1 TRANSFAC yes 70789108
chr19 4061367 4061373 SP1 TRANSFAC yes 112157702
chr19 4061367 4061374 SP1 TRANSFAC yes 70789109
chr19 4061367 4061374 SP1 TRANSFAC yes 112157703
chr19 4061369 4061379 SP1 TRANSFAC yes 70789110
chr19 4061369 4061379 SP1 TRANSFAC yes 112157704
chr19 4061370 4061380 SP1 JASPAR yes 70789111
chr19 4061370 4061380 SP1 JASPAR yes 112157705
chr19 4061371 4061377 SP1 TRANSFAC yes 70789112
chr19 4061371 4061377 SP1 TRANSFAC yes 112157706
chr19 4061371 4061381 SP1 JASPAR yes 70789113
chr19 4061371 4061381 SP1 JASPAR yes 112157707
chr19 4061373 4061384 E2F4 JASPAR yes 70789114
chr19 4061373 4061384 E2F4 JASPAR yes 112157708
chr19 4061375 4061385 SP1 JASPAR yes 70789115
chr19 4061375 4061385 SP1 JASPAR yes 112157709
chr19 4061376 4061382 SP1 TRANSFAC yes 70789116
chr19 4061376 4061382 SP1 TRANSFAC yes 112157710
chr19 4061376 4061386 SP1 JASPAR yes 70789117
chr19 4061376 4061386 SP1 JASPAR yes 112157711
chr19 4061378 4061383 SP1 TRANSFAC yes 70789118
chr19 4061378 4061383 SP1 TRANSFAC yes 112157712
chr19 4061405 4061409 H4TF2 TRANSFAC yes 70789119
chr19 4061405 4061409 H4TF2 TRANSFAC yes 112157713
chr19 4061413 4061430 ESR1 JASPAR yes 70789120
chr19 4061413 4061430 ESR1 JASPAR yes 112157714
chr19 4061417 4061420 MYB TRANSFAC yes 70789121
chr19 4061417 4061420 MYB TRANSFAC yes 112157715
chr19 4061417 4061434 RARA JASPAR yes 70789122
chr19 4061417 4061434 RXRA JASPAR yes 70789123
chr19 4061417 4061434 RARA JASPAR yes 112157716
chr19 4061417 4061434 RXRA JASPAR yes 112157717
chr19 4061419 4061427 SP1 TRANSFAC yes 70789124
chr19 4061419 4061427 SP1 TRANSFAC yes 112157718
chr19 4061419 4061429 SP1 JASPAR yes 70789125
chr19 4061419 4061429 SP1 JASPAR yes 112157719
chr19 4061420 4061426 SP1 TRANSFAC yes 70789126
chr19 4061420 4061426 SP1 TRANSFAC yes 112157720
chr19 4061422 4061427 SP1 TRANSFAC yes 70789127
chr19 4061422 4061427 SP1 TRANSFAC yes 112157721
chr19 4061427 4061441 TLX1 JASPAR yes 70789128
chr19 4061427 4061441 TLX1 JASPAR yes 112157722
chr19 4061428 4061442 TLX1 JASPAR yes 70789129
chr19 4061428 4061442 TLX1 JASPAR yes 112157723
chr19 4061434 4061443 NFIX JASPAR yes 70789130
chr19 4061434 4061443 NFIX JASPAR yes 112157724
chr19 4061434 4061444 NFIA JASPAR yes 70789131
chr19 4061434 4061444 NFIA JASPAR yes 112157725
chr19 4061436 4061442 NFIC JASPAR yes 70789132
chr19 4061436 4061442 NFIC JASPAR yes 112157726
chr19 4061443 4061449 SP1 TRANSFAC yes 70789133
chr19 4061443 4061449 SP1 TRANSFAC yes 112157727
SNP sites on vista28329[chr19:4061318-4061457]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 4061342 rs559444632 GCTGC G
CEBPB ZEB1
5398576
chr19 4061348 rs530393512 AG A
CEBPB
5398577
chr19 4061453 rs372483842 GC G
CEBPB
5398578
chr19 4061453 rs553935185 GC G
CEBPB
5398579
Genes possibly regulated by vista28329[chr19:4061318-4061457]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 3958451 3971121 - DAPK3 ENSG00000167657.7 3971121 0.67 1.0 16824 9803
chr19 3976054 3985467 - EEF2 ENSG00000167658.11 3985467 0.75 1.0 16825 24149
chr19 4007644 4039384 + PIAS4 ENSG00000105229.2 4007644 0.63 1.0 16826 46326
chr19 4041127 4043154 - AC016586.1 ENSG00000205147.3 4043154 0.9 1.0 16827 81836
chr19 4044362 4066943 - ZBTB7A ENSG00000178951.4 4066943 0.77 1.0 16828 94514
chr19 4090319 4124126 - MAP2K2 ENSG00000126934.9 4124126 0.66 1.0 16829 37331
chr19 4153598 4173051 + CREB3L3 ENSG00000060566.9 4153598 1.0 0.96 16830 7859
Expression level of Genes
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miRNAs possibly regulated by vista28329[chr19:4061318-4061457]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results