EnhancerDB
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  3. vista2833[chr1:109246671-109246905]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2833[chr1:109246671-109246905]
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Tissue distribution of vista2833
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Transcription factor that possibly regulate vista2833[chr1:109246671-109246905]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 109246683 109246687 H1TF2 TRANSFAC yes 31400571
chr1 109246683 109246687 NFE TRANSFAC yes 31400572
chr1 109246683 109246687 SRF TRANSFAC yes 31400573
chr1 109246683 109246687 H1TF2 TRANSFAC yes 118346097
chr1 109246683 109246687 NFE TRANSFAC yes 118346098
chr1 109246683 109246687 SRF TRANSFAC yes 118346099
chr1 109246689 109246699 SREBF2 JASPAR yes 31400574
chr1 109246689 109246699 SREBF2 JASPAR yes 118346100
chr1 109246717 109246732 AR JASPAR yes 31400575
chr1 109246717 109246732 AR JASPAR yes 118346101
chr1 109246741 109246752 NFIL3 JASPAR yes 31400576
chr1 109246741 109246752 NFIL3 JASPAR yes 118346102
chr1 109246742 109246754 DBP JASPAR yes 31400577
chr1 109246742 109246754 HLF JASPAR yes 31400578
chr1 109246742 109246754 DBP JASPAR yes 118346103
chr1 109246742 109246754 HLF JASPAR yes 118346104
chr1 109246743 109246755 POU2F1 JASPAR yes 31400579
chr1 109246743 109246755 POU2F1 JASPAR yes 118346105
chr1 109246744 109246752 GMEB2 JASPAR yes 31400580
chr1 109246744 109246752 GMEB2 JASPAR yes 118346106
chr1 109246758 109246772 PAX6 JASPAR yes 31400581
chr1 109246758 109246772 PAX6 JASPAR yes 118346107
chr1 109246768 109246779 BATF JASPAR yes 31400582
chr1 109246768 109246779 BATF JASPAR yes 118346108
chr1 109246772 109246783 PHOX2A JASPAR yes 31400583
chr1 109246772 109246783 PROP1 JASPAR yes 31400584
chr1 109246772 109246783 PHOX2A JASPAR yes 118346109
chr1 109246772 109246783 PROP1 JASPAR yes 118346110
chr1 109246793 109246800 POU2F1 TRANSFAC yes 31400585
chr1 109246793 109246800 POU2F1 TRANSFAC yes 118346111
chr1 109246805 109246819 CREB3L1 JASPAR yes 31400586
chr1 109246805 109246819 CREB3L1 JASPAR yes 118346112
chr1 109246815 109246826 FLI1 JASPAR yes 31400587
chr1 109246815 109246826 FLI1 JASPAR yes 118346113
chr1 109246833 109246851 ESR2 JASPAR yes 31400588
chr1 109246833 109246851 ESR2 JASPAR yes 118346114
chr1 109246844 109246855 NFKB1 JASPAR yes 31400589
chr1 109246844 109246855 NFKB1 JASPAR yes 118346115
chr1 109246849 109246859 MZF1 JASPAR yes 31400590
chr1 109246849 109246859 MZF1 JASPAR yes 118346116
chr1 109246849 109246870 ZNF263 JASPAR yes 31400591
chr1 109246849 109246870 ZNF263 JASPAR yes 118346117
chr1 109246852 109246858 SP1 TRANSFAC yes 31400592
chr1 109246852 109246858 SP1 TRANSFAC yes 118346118
chr1 109246871 109246875 TEAD2 TRANSFAC yes 31400593
chr1 109246871 109246875 TEAD2 TRANSFAC yes 118346119
chr1 109246871 109246876 TBP TRANSFAC yes 31400594
chr1 109246871 109246876 TBP TRANSFAC yes 118346120
chr1 109246877 109246893 ZNF143 JASPAR yes 31400595
chr1 109246877 109246893 ZNF143 JASPAR yes 118346121
SNP sites on vista2833[chr1:109246671-109246905]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 109246854 rs186291027 C G
MZF1 NFKB1 SP1 ZNF263
543443
chr1 109246859 rs142008738 C T
MZF1 ZNF263
543444
Genes possibly regulated by vista2833[chr1:109246671-109246905]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 109190912 109204148 - HENMT1 ENSG00000162639.11 109204148 0.82 0.93 959 57477
chr1 109234945 109244425 + PRPF38B ENSG00000134186.7 109234945 0.73 0.99 960 88274
chr1 109255279 109285365 + FNDC7 ENSG00000143107.4 109255279 0.96 0.97 961 91626
chr1 109289296 109352148 + STXBP3 ENSG00000116266.6 109289296 0.68 0.99 962 57609
Expression level of Genes
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miRNAs possibly regulated by vista2833[chr1:109246671-109246905]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results