EnhancerDB
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  3. vista28330[chr19:4061604-4061945]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28330[chr19:4061604-4061945]
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Tissue distribution of vista28330
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Transcription factor that possibly regulate vista28330[chr19:4061604-4061945]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 4061609 4061621 YY1 JASPAR yes 70789134
chr19 4061609 4061621 YY1 JASPAR yes 112157755
chr19 4061614 4061618 YY1 TRANSFAC yes 70789135
chr19 4061614 4061618 YY1 TRANSFAC yes 112157756
chr19 4061626 4061638 SRF JASPAR yes 70789136
chr19 4061626 4061638 SRF JASPAR yes 112157757
chr19 4061627 4061631 YY1 TRANSFAC yes 70789137
chr19 4061627 4061631 YY1 TRANSFAC yes 112157758
chr19 4061627 4061638 HOXA10 JASPAR yes 70789138
chr19 4061627 4061638 HOXA10 JASPAR yes 112157759
chr19 4061628 4061637 CDX1 JASPAR yes 70789139
chr19 4061628 4061637 CDX1 JASPAR yes 112157760
chr19 4061628 4061639 CDX2 JASPAR yes 70789140
chr19 4061628 4061639 CDX2 JASPAR yes 112157761
chr19 4061631 4061649 SRF JASPAR yes 70789141
chr19 4061631 4061649 SRF JASPAR yes 112157762
chr19 4061633 4061651 SRF JASPAR yes 70789142
chr19 4061633 4061651 SRF JASPAR yes 112157763
chr19 4061643 4061648 TFAP2A TRANSFAC yes 70789143
chr19 4061643 4061648 TFAP2A TRANSFAC yes 112157764
chr19 4061643 4061649 MZF1 JASPAR yes 70789144
chr19 4061643 4061649 MZF1 JASPAR yes 112157765
chr19 4061643 4061653 SP1 JASPAR yes 70789145
chr19 4061643 4061653 SP1 JASPAR yes 112157766
chr19 4061645 4061651 MAZ TRANSFAC yes 70789146
chr19 4061645 4061651 MAZ TRANSFAC yes 112157767
chr19 4061649 4061659 NFKB1 JASPAR yes 70789147
chr19 4061649 4061659 NFKB1 JASPAR yes 112157768
chr19 4061650 4061661 ELK4 JASPAR yes 70789148
chr19 4061650 4061661 FLI1 JASPAR yes 70789149
chr19 4061650 4061661 ELK4 JASPAR yes 112157769
chr19 4061650 4061661 FLI1 JASPAR yes 112157770
chr19 4061651 4061664 ELF1 JASPAR yes 70789150
chr19 4061651 4061664 ELF1 JASPAR yes 112157771
chr19 4061661 4061679 SRF JASPAR yes 70789151
chr19 4061661 4061679 SRF JASPAR yes 112157772
chr19 4061673 4061688 TFAP2A JASPAR yes 70789152
chr19 4061673 4061688 TFAP2A JASPAR yes 112157773
chr19 4061679 4061700 ZNF263 JASPAR yes 70789153
chr19 4061679 4061700 ZNF263 JASPAR yes 112157774
chr19 4061683 4061691 EHF JASPAR yes 70789154
chr19 4061683 4061691 EHF JASPAR yes 112157775
chr19 4061694 4061699 TFAP2A TRANSFAC yes 70789155
chr19 4061694 4061699 TFAP2A TRANSFAC yes 112157776
chr19 4061694 4061700 MZF1 JASPAR yes 70789156
chr19 4061694 4061700 MZF1 JASPAR yes 112157777
chr19 4061696 4061710 PLAG1 JASPAR yes 70789157
chr19 4061696 4061710 PLAG1 JASPAR yes 112157778
chr19 4061706 4061711 ETS2 TRANSFAC yes 70789158
chr19 4061706 4061711 ETS2 TRANSFAC yes 112157779
chr19 4061708 4061718 TBX21 JASPAR yes 70789159
chr19 4061708 4061718 TBX21 JASPAR yes 112157780
chr19 4061708 4061721 EOMES JASPAR yes 70789160
chr19 4061708 4061721 EOMES JASPAR yes 112157781
chr19 4061709 4061717 MGA JASPAR yes 70789161
chr19 4061709 4061717 TBX15 JASPAR yes 70789162
chr19 4061709 4061717 TBX1 JASPAR yes 70789163
chr19 4061709 4061717 TBX4 JASPAR yes 70789164
chr19 4061709 4061717 TBX5 JASPAR yes 70789165
chr19 4061709 4061717 MGA JASPAR yes 112157782
chr19 4061709 4061717 TBX15 JASPAR yes 112157783
chr19 4061709 4061717 TBX1 JASPAR yes 112157784
chr19 4061709 4061717 TBX4 JASPAR yes 112157785
chr19 4061709 4061717 TBX5 JASPAR yes 112157786
chr19 4061709 4061719 TBR1 JASPAR yes 70789166
chr19 4061709 4061719 TBR1 JASPAR yes 112157787
chr19 4061713 4061721 MEIS2 JASPAR yes 70789167
chr19 4061713 4061721 MEIS3 JASPAR yes 70789168
chr19 4061713 4061721 MEIS2 JASPAR yes 112157788
chr19 4061713 4061721 MEIS3 JASPAR yes 112157789
chr19 4061721 4061731 SP1 JASPAR yes 70789169
chr19 4061721 4061731 SP1 JASPAR yes 112157790
chr19 4061722 4061734 INSM1 JASPAR yes 70789170
chr19 4061722 4061734 INSM1 JASPAR yes 112157791
chr19 4061729 4061733 LFA1 TRANSFAC yes 70789171
chr19 4061729 4061733 LFA1 TRANSFAC yes 112157792
chr19 4061741 4061755 PLAG1 JASPAR yes 70789172
chr19 4061741 4061755 PLAG1 JASPAR yes 112157793
chr19 4061744 4061756 INSM1 JASPAR yes 70789173
chr19 4061744 4061756 INSM1 JASPAR yes 112157794
chr19 4061748 4061761 NFKB1 JASPAR yes 70789174
chr19 4061748 4061761 NFKB1 JASPAR yes 112157795
chr19 4061749 4061759 RELA JASPAR yes 70789175
chr19 4061749 4061759 RELA JASPAR yes 112157796
chr19 4061749 4061760 NFKB1 JASPAR yes 70789176
chr19 4061749 4061760 NFKB1 JASPAR yes 112157797
chr19 4061764 4061769 SP1 TRANSFAC yes 70789177
chr19 4061764 4061769 SP1 TRANSFAC yes 112157798
chr19 4061777 4061782 SP1 TRANSFAC yes 70789178
chr19 4061777 4061782 SP1 TRANSFAC yes 112157799
chr19 4061778 4061783 SP1 TRANSFAC yes 70789179
chr19 4061778 4061783 SP1 TRANSFAC yes 112157800
chr19 4061788 4061805 NR3C1 JASPAR yes 70789180
chr19 4061788 4061805 NR3C1 JASPAR yes 112157801
chr19 4061790 4061805 AR JASPAR yes 70789181
chr19 4061790 4061805 AR JASPAR yes 112157802
chr19 4061822 4061835 ELF1 JASPAR yes 70789182
chr19 4061822 4061835 ELF1 JASPAR yes 112157803
chr19 4061825 4061832 ETS1 TRANSFAC yes 70789183
chr19 4061825 4061832 ETS1 TRANSFAC yes 112157804
chr19 4061862 4061869 SPIB JASPAR yes 70789184
chr19 4061862 4061869 SPIB JASPAR yes 112157805
chr19 4061902 4061916 GLIS2 JASPAR yes 70789185
chr19 4061902 4061916 GLIS2 JASPAR yes 112157806
chr19 4061911 4061915 LFA1 TRANSFAC yes 70789186
chr19 4061911 4061915 LFA1 TRANSFAC yes 112157807
chr19 4061932 4061938 ETS1 JASPAR yes 70789187
chr19 4061932 4061938 SPI1 JASPAR yes 70789188
chr19 4061932 4061938 ETS1 JASPAR yes 112157808
chr19 4061932 4061938 SPI1 JASPAR yes 112157809
SNP sites on vista28330[chr19:4061604-4061945]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 4061781 rs350842 C A,G,T
SP1
5398582
chr19 4061801 rs376777234 T A
AR NR3C1
5398583
chr19 4061817 rs555555681 T A no 5398584
chr19 4061879 rs191123173 C T no 5398585
chr19 4061904 rs137965286 G A
GLIS2
5398586
chr19 4061923 rs558204375 GC G no 5398587
Genes possibly regulated by vista28330[chr19:4061604-4061945]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 3958451 3971121 - DAPK3 ENSG00000167657.7 3971121 0.67 1.0 16824 9517
chr19 3976054 3985467 - EEF2 ENSG00000167658.11 3985467 0.75 1.0 16825 23863
chr19 4007644 4039384 + PIAS4 ENSG00000105229.2 4007644 0.63 1.0 16826 46040
chr19 4041127 4043154 - AC016586.1 ENSG00000205147.3 4043154 0.9 1.0 16827 81550
chr19 4044362 4066943 - ZBTB7A ENSG00000178951.4 4066943 0.77 1.0 16828 95002
chr19 4090319 4124126 - MAP2K2 ENSG00000126934.9 4124126 0.66 1.0 16829 37819
chr19 4153598 4173051 + CREB3L3 ENSG00000060566.9 4153598 1.0 0.96 16830 8347
Expression level of Genes
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miRNAs possibly regulated by vista28330[chr19:4061604-4061945]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results