EnhancerDB
  1. Home
  2. Enhancers
  3. vista28331[chr19:4061996-4062359]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28331[chr19:4061996-4062359]
Back to top
Tissue distribution of vista28331
Back to top
Transcription factor that possibly regulate vista28331[chr19:4061996-4062359]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 4061999 4062016 ESR1 JASPAR yes 70789189
chr19 4061999 4062016 ESR1 JASPAR yes 112157819
chr19 4061999 4062017 ESR1 JASPAR yes 70789190
chr19 4061999 4062017 ESR2 JASPAR yes 70789191
chr19 4061999 4062017 ESR1 JASPAR yes 112157820
chr19 4061999 4062017 ESR2 JASPAR yes 112157821
chr19 4062000 4062015 ESR2 JASPAR yes 70789192
chr19 4062000 4062015 ESR2 JASPAR yes 112157822
chr19 4062000 4062020 ESR1 JASPAR yes 70789193
chr19 4062000 4062020 ESR1 JASPAR yes 112157823
chr19 4062008 4062016 NR4A2 JASPAR yes 70789194
chr19 4062008 4062016 NR4A2 JASPAR yes 112157824
chr19 4062009 4062030 ZNF263 JASPAR yes 70789195
chr19 4062009 4062030 ZNF263 JASPAR yes 112157825
chr19 4062017 4062028 E2F6 JASPAR yes 70789196
chr19 4062017 4062028 E2F6 JASPAR yes 112157826
chr19 4062023 4062034 EBF1 JASPAR yes 70789197
chr19 4062023 4062034 EBF1 JASPAR yes 112157827
chr19 4062024 4062036 TFAP2A JASPAR yes 70789198
chr19 4062024 4062036 TFAP2B JASPAR yes 70789199
chr19 4062024 4062036 TFAP2C JASPAR yes 70789200
chr19 4062024 4062036 TFAP2A JASPAR yes 112157828
chr19 4062024 4062036 TFAP2B JASPAR yes 112157829
chr19 4062024 4062036 TFAP2C JASPAR yes 112157830
chr19 4062024 4062039 TFAP2A JASPAR yes 70789201
chr19 4062024 4062039 TFAP2C JASPAR yes 70789202
chr19 4062024 4062039 TFAP2A JASPAR yes 112157831
chr19 4062024 4062039 TFAP2C JASPAR yes 112157832
chr19 4062045 4062052 USF2 TRANSFAC yes 70789203
chr19 4062045 4062052 USF2 TRANSFAC yes 112157833
chr19 4062047 4062052 USF2 TRANSFAC yes 70789204
chr19 4062047 4062052 USF2 TRANSFAC yes 112157834
chr19 4062060 4062066 NFE2 TRANSFAC yes 70789205
chr19 4062060 4062066 NFE2 TRANSFAC yes 112157835
chr19 4062062 4062071 SP1 TRANSFAC yes 70789206
chr19 4062062 4062071 SP1 TRANSFAC yes 112157836
chr19 4062063 4062073 SP1 JASPAR yes 70789207
chr19 4062063 4062073 SP1 JASPAR yes 112157837
chr19 4062065 4062075 ZNF740 JASPAR yes 70789208
chr19 4062065 4062075 ZNF740 JASPAR yes 112157838
chr19 4062084 4062093 SNAI2 JASPAR yes 70789209
chr19 4062084 4062093 SNAI2 JASPAR yes 112157839
chr19 4062084 4062094 FIGLA JASPAR yes 70789210
chr19 4062084 4062094 TCF3 JASPAR yes 70789211
chr19 4062084 4062094 FIGLA JASPAR yes 112157840
chr19 4062084 4062094 TCF3 JASPAR yes 112157841
chr19 4062158 4062169 TBX20 JASPAR yes 70789212
chr19 4062158 4062169 TBX20 JASPAR yes 112157842
chr19 4062159 4062167 TBX15 JASPAR yes 70789213
chr19 4062159 4062167 TBX15 JASPAR yes 112157843
chr19 4062160 4062165 SP1 TRANSFAC yes 70789214
chr19 4062160 4062165 SP1 TRANSFAC yes 112157844
chr19 4062161 4062171 SP1 JASPAR yes 70789215
chr19 4062161 4062171 SP1 JASPAR yes 112157845
chr19 4062174 4062182 FOXO3 JASPAR yes 70789216
chr19 4062174 4062182 FOXO3 JASPAR yes 112157846
chr19 4062176 4062183 NFATC2 JASPAR yes 70789217
chr19 4062176 4062183 NFATC2 JASPAR yes 112157847
chr19 4062210 4062229 CTCF JASPAR yes 70789218
chr19 4062210 4062229 CTCF JASPAR yes 112157848
chr19 4062231 4062245 ZIC1 JASPAR yes 70789219
chr19 4062231 4062245 ZIC1 JASPAR yes 112157849
chr19 4062263 4062267 H4TF2 TRANSFAC yes 70789220
chr19 4062263 4062267 H4TF2 TRANSFAC yes 112157850
chr19 4062343 4062358 TFAP2C JASPAR yes 70789221
chr19 4062343 4062358 TFAP2C JASPAR yes 112157851
chr19 4062344 4062349 SP1 TRANSFAC yes 70789222
chr19 4062344 4062349 SP1 TRANSFAC yes 112157852
chr19 4062344 4062359 HNF4G JASPAR yes 70789223
chr19 4062344 4062359 HNF4G JASPAR yes 112157853
chr19 4062345 4062359 NR2F1 JASPAR yes 70789224
chr19 4062345 4062359 NR2F1 JASPAR yes 112157854
chr19 4062345 4062360 HNF4A JASPAR yes 70789225
chr19 4062345 4062360 HNF4A JASPAR yes 112157855
SNP sites on vista28331[chr19:4061996-4062359]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 4062116 rs143848840 C A no 5398589
chr19 4062136 rs547899329 G A no 5398590
chr19 4062137 rs570968974 A G no 5398591
chr19 4062220 rs116935238 C T
CTCF
5398592
Genes possibly regulated by vista28331[chr19:4061996-4062359]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 3958451 3971121 - DAPK3 ENSG00000167657.7 3971121 0.67 1.0 16824 9125
chr19 3976054 3985467 - EEF2 ENSG00000167658.11 3985467 0.75 1.0 16825 23471
chr19 4007644 4039384 + PIAS4 ENSG00000105229.2 4007644 0.63 1.0 16826 45648
chr19 4041127 4043154 - AC016586.1 ENSG00000205147.3 4043154 0.9 1.0 16827 81158
chr19 4044362 4066943 - ZBTB7A ENSG00000178951.4 4066943 0.77 1.0 16828 95416
chr19 4090319 4124126 - MAP2K2 ENSG00000126934.9 4124126 0.66 1.0 16829 38233
chr19 4153598 4173051 + CREB3L3 ENSG00000060566.9 4153598 1.0 0.96 16830 8761
Expression level of Genes
Back to top
miRNAs possibly regulated by vista28331[chr19:4061996-4062359]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results