EnhancerDB
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  3. vista28332[chr19:4063699-4063930]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28332[chr19:4063699-4063930]
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Tissue distribution of vista28332
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Transcription factor that possibly regulate vista28332[chr19:4063699-4063930]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 4063709 4067937 POLR2A UCSC Txn Factor no Conserved 108370249
chr19 4063709 4067937 POLR2A UCSC Txn Factor no Conserved 108370250
chr19 4063709 4067937 POLR2A UCSC Txn Factor no Conserved 108370251
chr19 4063709 4067937 POLR2A UCSC Txn Factor no Conserved 108370252
chr19 4063690 4063701 NRF1 JASPAR yes 70789226
chr19 4063690 4063701 NRF1 JASPAR yes 112158025
chr19 4063690 4063710 ESR1 JASPAR yes 70789227
chr19 4063690 4063710 ESR1 JASPAR yes 112158026
chr19 4063698 4063712 PLAG1 JASPAR yes 70789228
chr19 4063698 4063712 PLAG1 JASPAR yes 112158028
chr19 4063707 4063719 GLI2 JASPAR yes 70789229
chr19 4063707 4063719 GLI2 JASPAR yes 112158029
chr19 4063713 4063728 ZIC3 JASPAR yes 70789230
chr19 4063713 4063728 ZIC4 JASPAR yes 70789231
chr19 4063713 4063728 ZIC3 JASPAR yes 112158030
chr19 4063713 4063728 ZIC4 JASPAR yes 112158031
chr19 4063714 4063728 ZIC1 JASPAR yes 70789232
chr19 4063714 4063728 ZIC1 JASPAR yes 112158032
chr19 4063718 4063728 SP1 JASPAR yes 70789233
chr19 4063718 4063728 ZNF740 JASPAR yes 70789234
chr19 4063718 4063728 SP1 JASPAR yes 112158033
chr19 4063718 4063728 ZNF740 JASPAR yes 112158034
chr19 4063720 4063726 MAZ TRANSFAC yes 70789235
chr19 4063720 4063726 MAZ TRANSFAC yes 112158035
chr19 4063722 4063743 REST JASPAR yes 70789236
chr19 4063722 4063743 REST JASPAR yes 112158036
chr19 4063723 4063742 REST JASPAR yes 70789237
chr19 4063723 4063742 REST JASPAR yes 112158037
chr19 4063724 4063739 HNF4A JASPAR yes 70789238
chr19 4063724 4063739 HNF4A JASPAR yes 112158038
chr19 4063725 4063739 NR2F1 JASPAR yes 70789239
chr19 4063725 4063739 NR2F1 JASPAR yes 112158039
chr19 4063725 4063740 HNF4G JASPAR yes 70789240
chr19 4063725 4063740 HNF4G JASPAR yes 112158040
chr19 4063750 4063771 ZNF263 JASPAR yes 70789241
chr19 4063750 4063771 ZNF263 JASPAR yes 112158041
chr19 4063756 4063777 REST JASPAR yes 70789242
chr19 4063756 4063777 REST JASPAR yes 112158042
chr19 4063767 4063771 LFA1 TRANSFAC yes 70789243
chr19 4063767 4063771 LFA1 TRANSFAC yes 112158043
chr19 4063779 4063788 ZEB1 JASPAR yes 70789244
chr19 4063779 4063788 ZEB1 JASPAR yes 112158044
chr19 4063782 4063787 USF2 TRANSFAC yes 70789245
chr19 4063782 4063787 USF2 TRANSFAC yes 112158045
chr19 4063788 4063799 ESRRA JASPAR yes 70789246
chr19 4063788 4063799 ESRRB JASPAR yes 70789247
chr19 4063788 4063799 ESRRA JASPAR yes 112158046
chr19 4063788 4063799 ESRRB JASPAR yes 112158047
chr19 4063789 4063797 NR4A2 JASPAR yes 70789248
chr19 4063789 4063797 NR4A2 JASPAR yes 112158048
chr19 4063811 4063821 MZF1 JASPAR yes 70789249
chr19 4063811 4063821 MZF1 JASPAR yes 112158049
chr19 4063846 4063856 ID4 JASPAR yes 70789250
chr19 4063846 4063856 TCF3 JASPAR yes 70789251
chr19 4063846 4063856 TCF4 JASPAR yes 70789252
chr19 4063846 4063856 ID4 JASPAR yes 112158050
chr19 4063846 4063856 TCF3 JASPAR yes 112158051
chr19 4063846 4063856 TCF4 JASPAR yes 112158052
chr19 4063847 4063856 SNAI2 JASPAR yes 70789253
chr19 4063847 4063856 SNAI2 JASPAR yes 112158053
chr19 4063848 4063853 USF2 TRANSFAC yes 70789254
chr19 4063848 4063853 USF2 TRANSFAC yes 112158054
chr19 4063869 4063872 MYB TRANSFAC yes 70789255
chr19 4063869 4063872 MYB TRANSFAC yes 112158055
chr19 4063876 4063886 RELA JASPAR yes 70789256
chr19 4063876 4063886 REL JASPAR yes 70789257
chr19 4063876 4063886 RELA JASPAR yes 112158056
chr19 4063876 4063886 REL JASPAR yes 112158057
chr19 4063876 4063887 NFKB1 JASPAR yes 70789258
chr19 4063876 4063887 NFKB1 JASPAR yes 112158058
chr19 4063890 4063904 RXRB JASPAR yes 70789259
chr19 4063890 4063904 RXRG JASPAR yes 70789260
chr19 4063890 4063904 RXRB JASPAR yes 112158059
chr19 4063890 4063904 RXRG JASPAR yes 112158060
chr19 4063893 4063897 YY1 TRANSFAC yes 70789261
chr19 4063893 4063897 YY1 TRANSFAC yes 112158061
chr19 4063893 4063906 NR2F1 JASPAR yes 70789262
chr19 4063893 4063906 NR2F1 JASPAR yes 112158062
chr19 4063897 4063912 NR2C2 JASPAR yes 70789263
chr19 4063897 4063912 NR2C2 JASPAR yes 112158063
chr19 4063903 4063909 SP1 TRANSFAC yes 70789264
chr19 4063903 4063909 SP1 TRANSFAC yes 112158064
chr19 4063922 4063940 SRF JASPAR yes 70789265
chr19 4063922 4063940 SRF JASPAR yes 112158065
SNP sites on vista28332[chr19:4063699-4063930]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 4063700 rs535398372 G C
ESR1 NRF1 PLAG1
5398609
chr19 4063704 rs555416563 C G
ESR1 PLAG1
5398610
chr19 4063781 rs572342457 C T
POLR2A ZEB1
5398611
chr19 4063801 rs140697567 C T
POLR2A
5398612
chr19 4063814 rs548567999 CCCCCTACGCTTCAGTCT C
MZF1 POLR2A
5398613
Genes possibly regulated by vista28332[chr19:4063699-4063930]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 3958451 3971121 - DAPK3 ENSG00000167657.7 3971121 0.67 1.0 16824 7422
chr19 3976054 3985467 - EEF2 ENSG00000167658.11 3985467 0.75 1.0 16825 21768
chr19 4007644 4039384 + PIAS4 ENSG00000105229.2 4007644 0.63 1.0 16826 43945
chr19 4041127 4043154 - AC016586.1 ENSG00000205147.3 4043154 0.9 1.0 16827 79455
chr19 4044362 4066943 - ZBTB7A ENSG00000178951.4 4066943 0.77 1.0 16828 96987
chr19 4090319 4124126 - MAP2K2 ENSG00000126934.9 4124126 0.66 1.0 16829 39804
chr19 4153598 4173051 + CREB3L3 ENSG00000060566.9 4153598 1.0 0.96 16830 10332
Expression level of Genes
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miRNAs possibly regulated by vista28332[chr19:4063699-4063930]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results