EnhancerDB
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  3. vista28334[chr19:4064475-4064868]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28334[chr19:4064475-4064868]
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Tissue distribution of vista28334
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Transcription factor that possibly regulate vista28334[chr19:4064475-4064868]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 4063709 4067937 POLR2A UCSC Txn Factor no Conserved 108370249
chr19 4063709 4067937 POLR2A UCSC Txn Factor no Conserved 108370250
chr19 4063709 4067937 POLR2A UCSC Txn Factor no Conserved 108370251
chr19 4063709 4067937 POLR2A UCSC Txn Factor no Conserved 108370252
chr19 4064653 4064854 EBF1 UCSC Txn Factor no Conserved 108370421
chr19 4064861 4067965 ZBTB7A UCSC Txn Factor no Conserved 108370440
chr19 4064861 4067965 ZBTB7A UCSC Txn Factor no Conserved 108370441
chr19 4064476 4064495 REST JASPAR yes 70789341
chr19 4064476 4064495 REST JASPAR yes 112158190
chr19 4064506 4064516 SP1 JASPAR yes 70789342
chr19 4064506 4064516 SP1 JASPAR yes 112158191
chr19 4064509 4064515 NFE2 TRANSFAC yes 70789343
chr19 4064509 4064515 NFE2 TRANSFAC yes 112158192
chr19 4064520 4064537 RARA JASPAR yes 70789344
chr19 4064520 4064537 RARA JASPAR yes 112158193
chr19 4064541 4064553 GRHL1 JASPAR yes 70789345
chr19 4064541 4064553 GRHL1 JASPAR yes 112158194
chr19 4064542 4064552 TFCP2 JASPAR yes 70789346
chr19 4064542 4064552 TFCP2 JASPAR yes 112158195
chr19 4064551 4064557 NFIC JASPAR yes 70789347
chr19 4064551 4064557 NFIC JASPAR yes 112158196
chr19 4064553 4064557 H1TF2 TRANSFAC yes 70789348
chr19 4064553 4064557 NFE TRANSFAC yes 70789349
chr19 4064553 4064557 SRF TRANSFAC yes 70789350
chr19 4064553 4064557 H1TF2 TRANSFAC yes 112158197
chr19 4064553 4064557 NFE TRANSFAC yes 112158198
chr19 4064553 4064557 SRF TRANSFAC yes 112158199
chr19 4064553 4064559 NFYC TRANSFAC yes 70789351
chr19 4064553 4064559 NFYC TRANSFAC yes 112158200
chr19 4064556 4064566 ERF JASPAR yes 70789352
chr19 4064556 4064566 ERF JASPAR yes 112158201
chr19 4064558 4064565 SPI1 JASPAR yes 70789353
chr19 4064558 4064565 SPI1 JASPAR yes 112158202
chr19 4064576 4064581 SP1 TRANSFAC yes 70789354
chr19 4064576 4064581 SP1 TRANSFAC yes 112158203
chr19 4064578 4064583 TFAP2A TRANSFAC yes 70789355
chr19 4064578 4064583 TFAP2A TRANSFAC yes 112158204
chr19 4064578 4064584 MZF1 JASPAR yes 70789356
chr19 4064578 4064584 MZF1 JASPAR yes 112158205
chr19 4064586 4064600 GLIS2 JASPAR yes 70789357
chr19 4064586 4064600 GLIS2 JASPAR yes 112158206
chr19 4064592 4064604 GLI2 JASPAR yes 70789358
chr19 4064592 4064604 GLI2 JASPAR yes 112158207
chr19 4064619 4064624 SP1 TRANSFAC yes 70789359
chr19 4064619 4064624 SP1 TRANSFAC yes 112158208
chr19 4064626 4064630 H4TF2 TRANSFAC yes 70789360
chr19 4064626 4064630 H4TF2 TRANSFAC yes 112158209
chr19 4064641 4064656 NR2C2 JASPAR yes 70789361
chr19 4064641 4064656 NR2C2 JASPAR yes 112158210
chr19 4064642 4064652 SP1 JASPAR yes 70789362
chr19 4064642 4064652 SP1 JASPAR yes 112158211
chr19 4064643 4064651 SP1 TRANSFAC yes 70789363
chr19 4064643 4064651 SP1 TRANSFAC yes 112158212
chr19 4064644 4064649 SP1 TRANSFAC yes 70789364
chr19 4064644 4064649 SP1 TRANSFAC yes 112158213
chr19 4064645 4064650 SP1 TRANSFAC yes 70789365
chr19 4064645 4064650 SP1 TRANSFAC yes 112158214
chr19 4064645 4064651 SP1 TRANSFAC yes 70789366
chr19 4064645 4064651 SP1 TRANSFAC yes 112158215
chr19 4064651 4064655 LFA1 TRANSFAC yes 70789367
chr19 4064651 4064655 LFA1 TRANSFAC yes 112158216
chr19 4064663 4064673 RELA JASPAR yes 70789368
chr19 4064663 4064673 REL JASPAR yes 70789369
chr19 4064663 4064673 RELA JASPAR yes 112158217
chr19 4064663 4064673 REL JASPAR yes 112158218
chr19 4064667 4064673 MZF1 JASPAR yes 70789370
chr19 4064667 4064673 MZF1 JASPAR yes 112158219
chr19 4064672 4064677 SP1 TRANSFAC yes 70789371
chr19 4064672 4064677 SP1 TRANSFAC yes 112158220
chr19 4064685 4064697 PKNOX2 JASPAR yes 70789372
chr19 4064685 4064697 PKNOX2 JASPAR yes 112158221
chr19 4064698 4064708 SP1 JASPAR yes 70789373
chr19 4064698 4064708 SP1 JASPAR yes 112158222
chr19 4064698 4064712 GLIS2 JASPAR yes 70789374
chr19 4064698 4064712 GLIS2 JASPAR yes 112158223
chr19 4064698 4064716 ESR1 JASPAR yes 70789375
chr19 4064698 4064716 ESR1 JASPAR yes 112158224
chr19 4064701 4064706 SP1 TRANSFAC yes 70789376
chr19 4064701 4064706 SP1 TRANSFAC yes 112158225
chr19 4064701 4064711 ZNF740 JASPAR yes 70789377
chr19 4064701 4064711 ZNF740 JASPAR yes 112158226
chr19 4064702 4064712 ZNF740 JASPAR yes 70789378
chr19 4064702 4064712 ZNF740 JASPAR yes 112158227
chr19 4064704 4064715 NFKB1 JASPAR yes 70789379
chr19 4064704 4064715 NFKB1 JASPAR yes 112158228
chr19 4064707 4064712 SP1 TRANSFAC yes 70789380
chr19 4064707 4064712 SP1 TRANSFAC yes 112158229
chr19 4064707 4064719 ZBTB7A JASPAR yes 70789381
chr19 4064707 4064719 ZBTB7A JASPAR yes 112158230
chr19 4064708 4064720 ZBTB7B JASPAR yes 70789382
chr19 4064708 4064720 ZBTB7C JASPAR yes 70789383
chr19 4064708 4064720 ZBTB7B JASPAR yes 112158231
chr19 4064708 4064720 ZBTB7C JASPAR yes 112158232
chr19 4064738 4064748 TCF4 JASPAR yes 70789384
chr19 4064738 4064748 TCF4 JASPAR yes 112158233
chr19 4064740 4064749 ZEB1 JASPAR yes 70789385
chr19 4064740 4064749 ZEB1 JASPAR yes 112158234
chr19 4064740 4064752 ZBTB7A JASPAR yes 70789386
chr19 4064740 4064752 ZBTB7A JASPAR yes 112158235
chr19 4064742 4064747 SP1 TRANSFAC yes 70789387
chr19 4064742 4064747 SP1 TRANSFAC yes 112158236
chr19 4064747 4064762 ZIC3 JASPAR yes 70789388
chr19 4064747 4064762 ZIC3 JASPAR yes 112158237
chr19 4064760 4064780 PPARG JASPAR yes 70789389
chr19 4064760 4064780 PPARG JASPAR yes 112158238
chr19 4064763 4064767 LFA1 TRANSFAC yes 70789390
chr19 4064763 4064767 LFA1 TRANSFAC yes 112158239
chr19 4064765 4064776 GCM1 JASPAR yes 70789391
chr19 4064765 4064776 GCM1 JASPAR yes 112158240
chr19 4064780 4064791 ELK4 JASPAR yes 70789392
chr19 4064780 4064791 ELK4 JASPAR yes 112158241
chr19 4064781 4064791 ETV6 JASPAR yes 70789393
chr19 4064781 4064791 GABPA JASPAR yes 70789394
chr19 4064781 4064791 ETV6 JASPAR yes 112158242
chr19 4064781 4064791 GABPA JASPAR yes 112158243
chr19 4064783 4064789 ETS1 JASPAR yes 70789395
chr19 4064783 4064789 SPI1 JASPAR yes 70789396
chr19 4064783 4064789 ETS1 JASPAR yes 112158244
chr19 4064783 4064789 SPI1 JASPAR yes 112158245
chr19 4064823 4064829 SP1 TRANSFAC yes 70789397
chr19 4064823 4064829 SP1 TRANSFAC yes 112158246
chr19 4064823 4064833 SP1 JASPAR yes 70789398
chr19 4064823 4064833 SP1 JASPAR yes 112158247
chr19 4064831 4064850 CTCF JASPAR yes 70789399
chr19 4064831 4064850 CTCF JASPAR yes 112158248
chr19 4064849 4064857 TEAD3 JASPAR yes 70789400
chr19 4064849 4064857 TEAD3 JASPAR yes 112158249
chr19 4064861 4064865 YY1 TRANSFAC yes 70789401
chr19 4064861 4064865 YY1 TRANSFAC yes 112158250
chr19 4064864 4064876 ZBTB7A JASPAR yes 70789402
chr19 4064864 4064876 ZBTB7A JASPAR yes 112158251
SNP sites on vista28334[chr19:4064475-4064868]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 4064672 rs1992710 C G
EBF1 MZF1 POLR2A REL RELA SP1
5398621
chr19 4064735 rs542371966 G A
EBF1 POLR2A
5398622
chr19 4064855 rs181732705 C T
POLR2A TEAD3
5398623
Genes possibly regulated by vista28334[chr19:4064475-4064868]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 3958451 3971121 - DAPK3 ENSG00000167657.7 3971121 0.67 1.0 16824 6646
chr19 3976054 3985467 - EEF2 ENSG00000167658.11 3985467 0.75 1.0 16825 20992
chr19 4007644 4039384 + PIAS4 ENSG00000105229.2 4007644 0.63 1.0 16826 43169
chr19 4041127 4043154 - AC016586.1 ENSG00000205147.3 4043154 0.9 1.0 16827 78679
chr19 4044362 4066943 - ZBTB7A ENSG00000178951.4 4066943 0.77 1.0 16828 97925
chr19 4090319 4124126 - MAP2K2 ENSG00000126934.9 4124126 0.66 1.0 16829 40742
chr19 4153598 4173051 + CREB3L3 ENSG00000060566.9 4153598 1.0 0.96 16830 11270
Expression level of Genes
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miRNAs possibly regulated by vista28334[chr19:4064475-4064868]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results