EnhancerDB
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  3. vista28339[chr19:4089074-4089290]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28339[chr19:4089074-4089290]
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Tissue distribution of vista28339
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Transcription factor that possibly regulate vista28339[chr19:4089074-4089290]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 4089075 4089090 FOXP1 JASPAR yes 70789680
chr19 4089076 4089091 FOXP1 JASPAR yes 70789681
chr19 4089076 4089097 IRF1 JASPAR yes 70789682
chr19 4089077 4089092 FOXP1 JASPAR yes 70789683
chr19 4089077 4089098 IRF1 JASPAR yes 70789684
chr19 4089078 4089093 FOXP1 JASPAR yes 70789685
chr19 4089078 4089099 IRF1 JASPAR yes 70789686
chr19 4089079 4089094 FOXP1 JASPAR yes 70789687
chr19 4089079 4089100 IRF1 JASPAR yes 70789688
chr19 4089080 4089095 FOXP1 JASPAR yes 70789689
chr19 4089080 4089101 IRF1 JASPAR yes 70789690
chr19 4089081 4089096 FOXP1 JASPAR yes 70789691
chr19 4089082 4089097 FOXP1 JASPAR yes 70789692
chr19 4089082 4089103 IRF1 JASPAR yes 70789693
chr19 4089083 4089098 FOXP1 JASPAR yes 70789694
chr19 4089086 4089101 STAT2 JASPAR yes 70789695
chr19 4089094 4089109 RUNX2 JASPAR yes 70789696
chr19 4089115 4089119 ESR1 TRANSFAC yes 70789697
chr19 4089124 4089142 RARA JASPAR yes 70789698
chr19 4089148 4089164 ZNF143 JASPAR yes 70789699
chr19 4089155 4089170 RUNX2 JASPAR yes 70789700
chr19 4089171 4089192 ZNF263 JASPAR yes 70789701
chr19 4089179 4089185 LEF1 TRANSFAC yes 70789702
chr19 4089179 4089185 SOX10 JASPAR yes 70789703
chr19 4089194 4089200 HiNF-A TRANSFAC yes 70789704
chr19 4089199 4089204 MYC TRANSFAC yes 70789705
chr19 4089200 4089213 SMAD2 JASPAR yes 70789706
chr19 4089214 4089224 MZF1 JASPAR yes 70789707
chr19 4089258 4089269 STAT1 JASPAR yes 70789708
chr19 4089258 4089271 ELF1 JASPAR yes 70789709
chr19 4089259 4089271 EHF JASPAR yes 70789710
chr19 4089259 4089271 ELF1 JASPAR yes 70789711
chr19 4089259 4089271 ELF4 JASPAR yes 70789712
chr19 4089259 4089272 ELF3 JASPAR yes 70789713
chr19 4089260 4089271 ELF5 JASPAR yes 70789714
chr19 4089261 4089268 ETS1 TRANSFAC yes 70789715
chr19 4089261 4089271 ETV6 JASPAR yes 70789716
chr19 4089261 4089272 ELK4 JASPAR yes 70789717
chr19 4089261 4089272 FLI1 JASPAR yes 70789718
chr19 4089262 4089270 EHF JASPAR yes 70789719
chr19 4089262 4089270 FEV JASPAR yes 70789720
chr19 4089263 4089270 SPI1 JASPAR yes 70789721
chr19 4089273 4089283 MZF1 JASPAR yes 70789722
SNP sites on vista28339[chr19:4089074-4089290]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 4089103 rs577249552 A T
IRF1 RUNX2
5398865
chr19 4089165 rs368004881 A G
RUNX2
5398866
chr19 4089233 rs193194381 C T no 5398867
Genes possibly regulated by vista28339[chr19:4089074-4089290]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 4007644 4039384 + PIAS4 ENSG00000105229.2 4007644 0.63 1.0 16826 18570
chr19 4041127 4043154 - AC016586.1 ENSG00000205147.3 4043154 0.9 1.0 16827 54080
chr19 4044362 4066943 - ZBTB7A ENSG00000178951.4 4066943 0.77 1.0 16828 77869
chr19 4090319 4124126 - MAP2K2 ENSG00000126934.9 4124126 0.66 1.0 16829 65164
chr19 4153598 4173051 + CREB3L3 ENSG00000060566.9 4153598 1.0 0.96 16830 35692
chr19 4174106 4182601 - SIRT6 ENSG00000077463.10 4182601 0.57 1.0 16831 6689
chr19 4183351 4224811 + ANKRD24 ENSG00000089847.8 4183351 0.78 1.0 16832 5939
Expression level of Genes
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miRNAs possibly regulated by vista28339[chr19:4089074-4089290]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results