EnhancerDB
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  3. vista28343[chr19:4369210-4369467]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28343[chr19:4369210-4369467]
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Tissue distribution of vista28343
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Transcription factor that possibly regulate vista28343[chr19:4369210-4369467]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 4369164 4369551 RUNX3 UCSC Txn Factor no Conserved 108370981
chr19 4369207 4369213 PEA3 TRANSFAC yes 70789855
chr19 4369207 4369213 PEA3 TRANSFAC yes 112169040
chr19 4369208 4369216 EHF JASPAR yes 70789856
chr19 4369208 4369216 EHF JASPAR yes 112169041
chr19 4369213 4369224 NFKB1 JASPAR yes 70789857
chr19 4369213 4369224 NFKB1 JASPAR yes 112169042
chr19 4369214 4369225 NFKB1 JASPAR yes 70789858
chr19 4369214 4369225 NFKB1 JASPAR yes 112169043
chr19 4369217 4369227 ZNF740 JASPAR yes 70789859
chr19 4369217 4369227 ZNF740 JASPAR yes 112169044
chr19 4369218 4369228 MZF1 JASPAR yes 70789860
chr19 4369218 4369228 SP1 JASPAR yes 70789861
chr19 4369218 4369228 ZNF740 JASPAR yes 70789862
chr19 4369218 4369228 MZF1 JASPAR yes 112169045
chr19 4369218 4369228 SP1 JASPAR yes 112169046
chr19 4369218 4369228 ZNF740 JASPAR yes 112169047
chr19 4369219 4369229 SP1 JASPAR yes 70789863
chr19 4369219 4369229 SP1 JASPAR yes 112169048
chr19 4369221 4369227 SP1 TRANSFAC yes 70789864
chr19 4369221 4369227 SP1 TRANSFAC yes 112169049
chr19 4369240 4369250 NFKB1 JASPAR yes 70789865
chr19 4369240 4369250 REL JASPAR yes 70789866
chr19 4369240 4369250 NFKB1 JASPAR yes 112169050
chr19 4369240 4369250 REL JASPAR yes 112169051
chr19 4369253 4369264 FLI1 JASPAR yes 70789867
chr19 4369253 4369264 FLI1 JASPAR yes 112169052
chr19 4369254 4369258 YY1 TRANSFAC yes 70789868
chr19 4369254 4369258 YY1 TRANSFAC yes 112169053
chr19 4369255 4369263 FEV JASPAR yes 70789869
chr19 4369255 4369263 FEV JASPAR yes 112169054
chr19 4369260 4369278 NR3C1 JASPAR yes 70789870
chr19 4369260 4369278 NR3C1 JASPAR yes 112169055
chr19 4369263 4369284 IRF1 JASPAR yes 70789871
chr19 4369263 4369284 IRF1 JASPAR yes 112169056
chr19 4369265 4369280 PRDM1 JASPAR yes 70789872
chr19 4369265 4369280 STAT2 JASPAR yes 70789873
chr19 4369265 4369280 PRDM1 JASPAR yes 112169057
chr19 4369265 4369280 STAT2 JASPAR yes 112169058
chr19 4369266 4369280 STAT1 JASPAR yes 70789874
chr19 4369266 4369280 STAT1 JASPAR yes 112169059
chr19 4369267 4369279 IRF1 JASPAR yes 70789875
chr19 4369267 4369279 IRF1 JASPAR yes 112169060
chr19 4369267 4369282 IRF9 JASPAR yes 70789876
chr19 4369267 4369282 IRF9 JASPAR yes 112169061
chr19 4369279 4369294 RUNX2 JASPAR yes 70789877
chr19 4369279 4369294 RUNX2 JASPAR yes 112169062
chr19 4369324 4369335 E2F6 JASPAR yes 70789878
chr19 4369324 4369335 E2F6 JASPAR yes 112169063
chr19 4369354 4369369 HSF1 JASPAR yes 70789879
chr19 4369354 4369369 HSF1 JASPAR yes 112169064
chr19 4369357 4369372 STAT1 JASPAR yes 70789880
chr19 4369357 4369372 STAT1 JASPAR yes 112169065
chr19 4369359 4369370 STAT1 JASPAR yes 70789881
chr19 4369359 4369370 STAT3 JASPAR yes 70789882
chr19 4369359 4369370 STAT1 JASPAR yes 112169066
chr19 4369359 4369370 STAT3 JASPAR yes 112169067
chr19 4369360 4369368 STAT6 TRANSFAC yes 70789883
chr19 4369360 4369368 STAT6 TRANSFAC yes 112169068
chr19 4369364 4369369 ETS2 TRANSFAC yes 70789884
chr19 4369364 4369369 ETS2 TRANSFAC yes 112169069
chr19 4369401 4369410 RUNX2 JASPAR yes 70789885
chr19 4369401 4369410 RUNX2 JASPAR yes 112169070
chr19 4369404 4369412 TBX5 JASPAR yes 70789886
chr19 4369404 4369412 TBX5 JASPAR yes 112169071
chr19 4369415 4369420 SP1 TRANSFAC yes 70789887
chr19 4369415 4369420 SP1 TRANSFAC yes 112169072
chr19 4369416 4369436 ESR1 JASPAR yes 70789888
chr19 4369416 4369436 ESR1 JASPAR yes 112169073
chr19 4369421 4369436 ESR2 JASPAR yes 70789889
chr19 4369421 4369436 ESR2 JASPAR yes 112169074
chr19 4369427 4369437 SP1 JASPAR yes 70789890
chr19 4369427 4369437 SP1 JASPAR yes 112169075
chr19 4369438 4369458 TP63 JASPAR yes 70789891
chr19 4369438 4369458 TP63 JASPAR yes 112169076
chr19 4369439 4369457 TP53 JASPAR yes 70789892
chr19 4369439 4369457 TP53 JASPAR yes 112169077
chr19 4369440 4369455 TP53 JASPAR yes 70789893
chr19 4369440 4369455 TP53 JASPAR yes 112169078
SNP sites on vista28343[chr19:4369210-4369467]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 4369219 rs145155089 C T
MZF1 NFKB1 RUNX3 SP1 ZNF740
5400257
chr19 4369304 rs376637355 G A
RUNX3
5400258
chr19 4369401 rs112274685 G A
RUNX2 RUNX3
5400259
chr19 4369447 rs56033249 C T
RUNX3 TP53 TP63
5400260
Genes possibly regulated by vista28343[chr19:4369210-4369467]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 4278598 4290721 + SHD ENSG00000105251.6 4278598 0.95 1.0 16835 9388
chr19 4292229 4302428 - TMIGD2 ENSG00000167664.4 4302428 0.99 0.98 16836 33218
chr19 4304597 4323840 + FSD1 ENSG00000105255.6 4304597 0.93 1.0 16837 35387
chr19 4324040 4342783 - STAP2 ENSG00000178078.7 4342783 0.69 0.95 16838 73573
chr19 4343524 4360083 + MPND ENSG00000008382.11 4343524 0.71 1.0 16839 74314
chr19 4360367 4400544 - SH3GL1 ENSG00000141985.5 4400544 0.66 1.0 16840 68923
chr19 4402659 4445015 + CHAF1A ENSG00000167670.11 4402659 0.83 0.99 16841 66808
chr19 4444996 4457819 - UBXN6 ENSG00000167671.7 4457819 0.65 1.0 16842 11648
Expression level of Genes
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miRNAs possibly regulated by vista28343[chr19:4369210-4369467]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results