EnhancerDB
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  3. vista28345[chr19:4375126-4375688]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28345[chr19:4375126-4375688]
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Tissue distribution of vista28345
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Transcription factor that possibly regulate vista28345[chr19:4375126-4375688]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 4374343 4376537 POLR2A UCSC Txn Factor no Conserved 108371304
chr19 4374343 4376537 POLR2A UCSC Txn Factor no Conserved 108371305
chr19 4374343 4376537 POLR2A UCSC Txn Factor no Conserved 108371306
chr19 4374407 4375304 E2F6 UCSC Txn Factor no Conserved 108371367
chr19 4374637 4375266 CTCF UCSC Txn Factor no Conserved 108371456
chr19 4375065 4375535 GATA3 UCSC Txn Factor no Conserved 108371522
chr19 4375067 4375787 TFAP2C UCSC Txn Factor no Conserved 108371524
chr19 4375067 4375787 TFAP2C UCSC Txn Factor no Conserved 108371525
chr19 4375115 4375580 TFAP2A UCSC Txn Factor no Conserved 108371540
chr19 4375136 4375370 TAL1 UCSC Txn Factor no Conserved 108371544
chr19 4375163 4375603 TEAD4 UCSC Txn Factor no Conserved 108371556
chr19 4375200 4375534 ESR1 UCSC Txn Factor no Conserved 108371574
chr19 4375588 4376042 EP300 UCSC Txn Factor no Conserved 108371685
chr19 4375588 4376042 EP300 UCSC Txn Factor no Conserved 108371686
chr19 4375675 4376111 MAZ UCSC Txn Factor no Conserved 108371739
chr19 4375675 4376111 MAZ UCSC Txn Factor no Conserved 108371740
chr19 4375684 4376089 CTCF UCSC Txn Factor no Conserved 108371753
chr19 4375684 4376089 CTCF UCSC Txn Factor no Conserved 108371754
chr19 4375116 4375135 CTCF JASPAR yes 70789924
chr19 4375116 4375135 CTCF JASPAR yes 112169765
chr19 4375119 4375133 ZIC1 JASPAR yes 70789925
chr19 4375119 4375133 ZIC1 JASPAR yes 112169766
chr19 4375148 4375152 NFE TRANSFAC yes 70789926
chr19 4375148 4375152 NFE TRANSFAC yes 112169767
chr19 4375155 4375168 SMAD2 JASPAR yes 70789927
chr19 4375155 4375168 SMAD2 JASPAR yes 112169768
chr19 4375157 4375172 ESR2 JASPAR yes 70789928
chr19 4375157 4375172 ESR2 JASPAR yes 112169769
chr19 4375177 4375196 RFX2 JASPAR yes 70789929
chr19 4375177 4375196 RFX2 JASPAR yes 112169770
chr19 4375229 4375238 ZEB1 JASPAR yes 70789930
chr19 4375229 4375238 ZEB1 JASPAR yes 112169771
chr19 4375230 4375240 TCF4 JASPAR yes 70789931
chr19 4375230 4375240 TCF4 JASPAR yes 112169772
chr19 4375232 4375237 USF2 TRANSFAC yes 70789932
chr19 4375232 4375237 USF2 TRANSFAC yes 112169773
chr19 4375232 4375251 REST JASPAR yes 70789933
chr19 4375232 4375251 REST JASPAR yes 112169774
chr19 4375238 4375250 NHLH1 JASPAR yes 70789934
chr19 4375238 4375250 NHLH1 JASPAR yes 112169775
chr19 4375239 4375249 NHLH1 JASPAR yes 70789935
chr19 4375239 4375249 NHLH1 JASPAR yes 112169776
chr19 4375243 4375254 E2F1 JASPAR yes 70789936
chr19 4375243 4375254 E2F1 JASPAR yes 112169777
chr19 4375245 4375260 TFAP2A JASPAR yes 70789937
chr19 4375245 4375260 TFAP2A JASPAR yes 112169778
chr19 4375248 4375260 TFAP2A JASPAR yes 70789938
chr19 4375248 4375260 TFAP2B JASPAR yes 70789939
chr19 4375248 4375260 TFAP2C JASPAR yes 70789940
chr19 4375248 4375260 TFAP2A JASPAR yes 112169779
chr19 4375248 4375260 TFAP2B JASPAR yes 112169780
chr19 4375248 4375260 TFAP2C JASPAR yes 112169781
chr19 4375252 4375261 THAP1 JASPAR yes 70789941
chr19 4375252 4375261 THAP1 JASPAR yes 112169782
chr19 4375255 4375259 LFA1 TRANSFAC yes 70789942
chr19 4375255 4375259 LFA1 TRANSFAC yes 112169783
chr19 4375256 4375266 NEUROG2 JASPAR yes 70789943
chr19 4375256 4375266 NEUROG2 JASPAR yes 112169784
chr19 4375267 4375276 NKX2-8 JASPAR yes 70789944
chr19 4375267 4375276 NKX2-8 JASPAR yes 112169785
chr19 4375272 4375283 FOXP2 JASPAR yes 70789945
chr19 4375272 4375283 FOXP2 JASPAR yes 112169786
chr19 4375309 4375324 TFAP2A JASPAR yes 70789946
chr19 4375309 4375324 TFAP2C JASPAR yes 70789947
chr19 4375309 4375324 TFAP2A JASPAR yes 112169787
chr19 4375309 4375324 TFAP2C JASPAR yes 112169788
chr19 4375310 4375324 TLX1 JASPAR yes 70789948
chr19 4375310 4375324 TLX1 JASPAR yes 112169789
chr19 4375310 4375325 HNF4A JASPAR yes 70789949
chr19 4375310 4375325 HNF4A JASPAR yes 112169790
chr19 4375311 4375325 TLX1 JASPAR yes 70789950
chr19 4375311 4375325 TLX1 JASPAR yes 112169791
chr19 4375311 4375326 TFAP2A JASPAR yes 70789951
chr19 4375311 4375326 TFAP2A JASPAR yes 112169792
chr19 4375331 4375346 RFX5 JASPAR yes 70789952
chr19 4375331 4375346 RFX5 JASPAR yes 112169793
chr19 4375339 4375347 EHF JASPAR yes 70789953
chr19 4375339 4375347 EHF JASPAR yes 112169794
chr19 4375341 4375352 ESRRB JASPAR yes 70789954
chr19 4375341 4375352 ESRRB JASPAR yes 112169795
chr19 4375341 4375354 NR2F1 JASPAR yes 70789955
chr19 4375341 4375354 NR2F1 JASPAR yes 112169796
chr19 4375342 4375360 ESR2 JASPAR yes 70789956
chr19 4375342 4375360 ESR2 JASPAR yes 112169797
chr19 4375343 4375351 NR4A2 JASPAR yes 70789957
chr19 4375343 4375351 NR4A2 JASPAR yes 112169798
chr19 4375345 4375349 ESR1 TRANSFAC yes 70789958
chr19 4375345 4375349 ESR1 TRANSFAC yes 112169799
chr19 4375355 4375361 MZF1 JASPAR yes 70789959
chr19 4375355 4375361 MZF1 JASPAR yes 112169800
chr19 4375385 4375396 STAT3 JASPAR yes 70789960
chr19 4375385 4375396 STAT3 JASPAR yes 112169801
chr19 4375387 4375399 TEAD1 JASPAR yes 70789961
chr19 4375387 4375399 TEAD1 JASPAR yes 112169802
chr19 4375389 4375399 TEAD1 JASPAR yes 70789962
chr19 4375389 4375399 TEAD4 JASPAR yes 70789963
chr19 4375389 4375399 TEAD1 JASPAR yes 112169803
chr19 4375389 4375399 TEAD4 JASPAR yes 112169804
chr19 4375390 4375398 TEAD3 JASPAR yes 70789964
chr19 4375390 4375398 TEAD3 JASPAR yes 112169805
chr19 4375400 4375409 THAP1 JASPAR yes 70789965
chr19 4375400 4375409 THAP1 JASPAR yes 112169806
chr19 4375402 4375423 ZNF263 JASPAR yes 70789966
chr19 4375402 4375423 ZNF263 JASPAR yes 112169807
chr19 4375403 4375407 LFA1 TRANSFAC yes 70789967
chr19 4375403 4375407 LFA1 TRANSFAC yes 112169808
chr19 4375404 4375413 SNAI2 JASPAR yes 70789968
chr19 4375404 4375413 SNAI2 JASPAR yes 112169809
chr19 4375404 4375414 ID4 JASPAR yes 70789969
chr19 4375404 4375414 ID4 JASPAR yes 112169810
chr19 4375405 4375420 NR2C2 JASPAR yes 70789970
chr19 4375405 4375420 NR2C2 JASPAR yes 112169811
chr19 4375409 4375419 SP1 JASPAR yes 70789971
chr19 4375409 4375419 SP1 JASPAR yes 112169812
chr19 4375414 4375424 SP1 JASPAR yes 70789972
chr19 4375414 4375424 SP1 JASPAR yes 112169813
chr19 4375416 4375422 MAZ TRANSFAC yes 70789973
chr19 4375416 4375422 MAZ TRANSFAC yes 112169814
chr19 4375417 4375427 MZF1 JASPAR yes 70789974
chr19 4375417 4375427 MZF1 JASPAR yes 112169815
chr19 4375421 4375425 LFA1 TRANSFAC yes 70789975
chr19 4375421 4375425 LFA1 TRANSFAC yes 112169816
chr19 4375424 4375439 TFAP2A JASPAR yes 70789976
chr19 4375424 4375439 TFAP2C JASPAR yes 70789977
chr19 4375424 4375439 TFAP2A JASPAR yes 112169817
chr19 4375424 4375439 TFAP2C JASPAR yes 112169818
chr19 4375426 4375431 SP1 TRANSFAC yes 70789978
chr19 4375426 4375431 SP1 TRANSFAC yes 112169819
chr19 4375427 4375439 TFAP2A JASPAR yes 70789979
chr19 4375427 4375439 TFAP2B JASPAR yes 70789980
chr19 4375427 4375439 TFAP2C JASPAR yes 70789981
chr19 4375427 4375439 TFAP2A JASPAR yes 112169820
chr19 4375427 4375439 TFAP2B JASPAR yes 112169821
chr19 4375427 4375439 TFAP2C JASPAR yes 112169822
chr19 4375428 4375437 TFAP2A JASPAR yes 70789982
chr19 4375428 4375437 TFAP2A JASPAR yes 112169823
chr19 4375429 4375438 TFAP2A JASPAR yes 70789983
chr19 4375429 4375438 TFAP2A JASPAR yes 112169824
chr19 4375455 4375464 SNAI2 JASPAR yes 70789984
chr19 4375455 4375464 SNAI2 JASPAR yes 112169825
chr19 4375455 4375465 TCF3 JASPAR yes 70789985
chr19 4375455 4375465 TCF4 JASPAR yes 70789986
chr19 4375455 4375465 TCF3 JASPAR yes 112169826
chr19 4375455 4375465 TCF4 JASPAR yes 112169827
chr19 4375457 4375466 ZEB1 JASPAR yes 70789987
chr19 4375457 4375466 ZEB1 JASPAR yes 112169828
chr19 4375457 4375475 RARA JASPAR yes 70789988
chr19 4375457 4375475 RARA JASPAR yes 112169829
chr19 4375458 4375466 TBX15 JASPAR yes 70789989
chr19 4375458 4375466 TBX15 JASPAR yes 112169830
chr19 4375458 4375469 E2F6 JASPAR yes 70789990
chr19 4375458 4375469 E2F6 JASPAR yes 112169831
chr19 4375459 4375464 SP1 TRANSFAC yes 70789991
chr19 4375459 4375464 SP1 TRANSFAC yes 112169832
chr19 4375462 4375467 ETS2 TRANSFAC yes 70789992
chr19 4375462 4375467 ETS2 TRANSFAC yes 112169833
chr19 4375478 4375489 STAT3 JASPAR yes 70789993
chr19 4375478 4375489 STAT3 JASPAR yes 112169834
chr19 4375478 4375492 EBF1 JASPAR yes 70789994
chr19 4375478 4375492 EBF1 JASPAR yes 112169835
chr19 4375480 4375491 EBF1 JASPAR yes 70789995
chr19 4375480 4375491 EBF1 JASPAR yes 112169836
chr19 4375502 4375520 NFYA JASPAR yes 70789996
chr19 4375502 4375520 NFYA JASPAR yes 112169837
chr19 4375504 4375510 NFIC JASPAR yes 70789997
chr19 4375504 4375510 NFIC JASPAR yes 112169838
chr19 4375504 4375523 CTCF JASPAR yes 70789998
chr19 4375504 4375523 CTCF JASPAR yes 112169839
chr19 4375542 4375556 RXRB JASPAR yes 70789999
chr19 4375542 4375556 RXRG JASPAR yes 70790000
chr19 4375542 4375556 RXRB JASPAR yes 112169840
chr19 4375542 4375556 RXRG JASPAR yes 112169841
chr19 4375542 4375557 NR2C2 JASPAR yes 70790001
chr19 4375542 4375557 NR2C2 JASPAR yes 112169842
chr19 4375565 4375583 SRF JASPAR yes 70790002
chr19 4375565 4375583 SRF JASPAR yes 112169843
chr19 4375592 4375607 TFAP2C JASPAR yes 70790003
chr19 4375592 4375607 TFAP2C JASPAR yes 112169844
chr19 4375593 4375604 TFAP2A JASPAR yes 70790004
chr19 4375593 4375604 TFAP2B JASPAR yes 70790005
chr19 4375593 4375604 TFAP2C JASPAR yes 70790006
chr19 4375593 4375604 TFAP2A JASPAR yes 112169845
chr19 4375593 4375604 TFAP2B JASPAR yes 112169846
chr19 4375593 4375604 TFAP2C JASPAR yes 112169847
chr19 4375594 4375603 TFAP2A JASPAR yes 70790007
chr19 4375594 4375603 TFAP2A JASPAR yes 112169848
chr19 4375606 4375621 RFX5 JASPAR yes 70790008
chr19 4375606 4375621 RFX5 JASPAR yes 112169849
chr19 4375614 4375634 RREB1 JASPAR yes 70790009
chr19 4375614 4375634 RREB1 JASPAR yes 112169850
chr19 4375617 4375632 RUNX2 JASPAR yes 70790010
chr19 4375617 4375632 RUNX2 JASPAR yes 112169851
chr19 4375618 4375627 RUNX2 JASPAR yes 70790011
chr19 4375618 4375627 RUNX2 JASPAR yes 112169852
chr19 4375656 4375669 POU2F2 JASPAR yes 70790012
chr19 4375656 4375669 POU2F2 JASPAR yes 112169853
chr19 4375670 4375686 POU4F3 JASPAR yes 70790013
chr19 4375670 4375686 POU4F3 JASPAR yes 112169854
chr19 4375672 4375686 POU4F1 JASPAR yes 70790014
chr19 4375672 4375686 POU4F1 JASPAR yes 112169855
SNP sites on vista28345[chr19:4375126-4375688]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 4375162 rs11085073 G A
CTCF E2F6 ESR2 GATA3 POLR2A SMAD2 TAL1 TFAP2A TFAP2C
5400344
chr19 4375250 rs558286325 G A
CTCF E2F1 E2F6 ESR1 GATA3 NHLH1 POLR2A REST TAL1 TEAD4 TFAP2A TFAP2B TFAP2C
5400345
chr19 4375308 rs374761028 T C
ESR1 GATA3 POLR2A TAL1 TEAD4 TFAP2A TFAP2C
5400346
chr19 4375325 rs184172310 G A
ESR1 GATA3 HNF4A POLR2A TAL1 TEAD4 TFAP2A TFAP2C TLX1
5400347
chr19 4375406 rs541412833 G T
ESR1 GATA3 ID4 LFA1 NR2C2 POLR2A SNAI2 TEAD4 TFAP2A TFAP2C THAP1 ZNF263
5400348
chr19 4375457 rs370064795 G A
ESR1 GATA3 POLR2A RARA SNAI2 TCF3 TCF4 TEAD4 TFAP2A TFAP2C ZEB1
5400349
chr19 4375673 rs243401 C T
EP300 POLR2A POU4F1 POU4F3 TFAP2C
5400350
Genes possibly regulated by vista28345[chr19:4375126-4375688]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 4278598 4290721 + SHD ENSG00000105251.6 4278598 0.95 1.0 16835 3472
chr19 4292229 4302428 - TMIGD2 ENSG00000167664.4 4302428 0.99 0.98 16836 27302
chr19 4304597 4323840 + FSD1 ENSG00000105255.6 4304597 0.93 1.0 16837 29471
chr19 4324040 4342783 - STAP2 ENSG00000178078.7 4342783 0.69 0.95 16838 67657
chr19 4343524 4360083 + MPND ENSG00000008382.11 4343524 0.71 1.0 16839 68398
chr19 4360367 4400544 - SH3GL1 ENSG00000141985.5 4400544 0.66 1.0 16840 75144
chr19 4402659 4445015 + CHAF1A ENSG00000167670.11 4402659 0.83 0.99 16841 73029
chr19 4444996 4457819 - UBXN6 ENSG00000167671.7 4457819 0.65 1.0 16842 17869
chr19 4472284 4502223 + HDGFRP2 ENSG00000167674.10 4472284 0.71 1.0 16843 3404
Expression level of Genes
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miRNAs possibly regulated by vista28345[chr19:4375126-4375688]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results