EnhancerDB
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  3. vista28346[chr19:4375735-4376107]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28346[chr19:4375735-4376107]
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Tissue distribution of vista28346
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Transcription factor that possibly regulate vista28346[chr19:4375735-4376107]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 4374343 4376537 POLR2A UCSC Txn Factor no Conserved 108371304
chr19 4374343 4376537 POLR2A UCSC Txn Factor no Conserved 108371305
chr19 4374343 4376537 POLR2A UCSC Txn Factor no Conserved 108371306
chr19 4375067 4375787 TFAP2C UCSC Txn Factor no Conserved 108371524
chr19 4375067 4375787 TFAP2C UCSC Txn Factor no Conserved 108371525
chr19 4375588 4376042 EP300 UCSC Txn Factor no Conserved 108371685
chr19 4375588 4376042 EP300 UCSC Txn Factor no Conserved 108371686
chr19 4375675 4376111 MAZ UCSC Txn Factor no Conserved 108371739
chr19 4375675 4376111 MAZ UCSC Txn Factor no Conserved 108371740
chr19 4375684 4376089 CTCF UCSC Txn Factor no Conserved 108371753
chr19 4375684 4376089 CTCF UCSC Txn Factor no Conserved 108371754
chr19 4375694 4375974 EBF1 UCSC Txn Factor no Conserved 108371759
chr19 4375748 4376090 JUND UCSC Txn Factor no Conserved 108371790
chr19 4375754 4376438 GATA1 UCSC Txn Factor no Conserved 108371795
chr19 4375764 4376045 CEBPB UCSC Txn Factor no Conserved 108371803
chr19 4375793 4376049 ATF1 UCSC Txn Factor no Conserved 108371826
chr19 4375801 4376033 ATF3 UCSC Txn Factor no Conserved 108371828
chr19 4375815 4376056 TEAD4 UCSC Txn Factor no Conserved 108371838
chr19 4375816 4376055 TAL1 UCSC Txn Factor no Conserved 108371840
chr19 4375874 4375982 NR2F2 UCSC Txn Factor no Conserved 108371850
chr19 4375716 4375736 ESR1 JASPAR yes 70790015
chr19 4375716 4375736 ESR1 JASPAR yes 112169860
chr19 4375748 4375754 ETS1 JASPAR yes 70790016
chr19 4375748 4375754 ETS1 JASPAR yes 112169861
chr19 4375757 4375775 SRF JASPAR yes 70790017
chr19 4375757 4375775 SRF JASPAR yes 112169862
chr19 4375763 4375767 TEAD2 TRANSFAC yes 70790018
chr19 4375763 4375767 TEAD2 TRANSFAC yes 112169863
chr19 4375763 4375768 TBP TRANSFAC yes 70790019
chr19 4375763 4375768 TBP TRANSFAC yes 112169864
chr19 4375763 4375769 TFIID TRANSFAC yes 70790020
chr19 4375763 4375769 TFIID TRANSFAC yes 112169865
chr19 4375768 4375773 ETS2 TRANSFAC yes 70790021
chr19 4375768 4375773 ETS2 TRANSFAC yes 112169866
chr19 4375779 4375794 RUNX2 JASPAR yes 70790022
chr19 4375779 4375794 RUNX2 JASPAR yes 112169867
chr19 4375779 4375799 RREB1 JASPAR yes 70790023
chr19 4375779 4375799 RREB1 JASPAR yes 112169868
chr19 4375780 4375790 RUNX3 JASPAR yes 70790024
chr19 4375780 4375790 RUNX3 JASPAR yes 112169869
chr19 4375804 4375818 EBF1 JASPAR yes 70790025
chr19 4375804 4375818 EBF1 JASPAR yes 112169870
chr19 4375805 4375816 EBF1 JASPAR yes 70790026
chr19 4375805 4375816 EBF1 JASPAR yes 112169871
chr19 4375806 4375818 TFAP2A JASPAR yes 70790027
chr19 4375806 4375818 TFAP2B JASPAR yes 70790028
chr19 4375806 4375818 TFAP2C JASPAR yes 70790029
chr19 4375806 4375818 TFAP2A JASPAR yes 112169872
chr19 4375806 4375818 TFAP2B JASPAR yes 112169873
chr19 4375806 4375818 TFAP2C JASPAR yes 112169874
chr19 4375806 4375821 TFAP2A JASPAR yes 70790030
chr19 4375806 4375821 TFAP2C JASPAR yes 70790031
chr19 4375806 4375821 TFAP2A JASPAR yes 112169875
chr19 4375806 4375821 TFAP2C JASPAR yes 112169876
chr19 4375807 4375818 TFAP2A JASPAR yes 70790032
chr19 4375807 4375818 TFAP2B JASPAR yes 70790033
chr19 4375807 4375818 TFAP2C JASPAR yes 70790034
chr19 4375807 4375818 TFAP2A JASPAR yes 112169877
chr19 4375807 4375818 TFAP2B JASPAR yes 112169878
chr19 4375807 4375818 TFAP2C JASPAR yes 112169879
chr19 4375828 4375839 NFKB1 JASPAR yes 70790035
chr19 4375828 4375839 NFKB1 JASPAR yes 112169880
chr19 4375844 4375863 REST JASPAR yes 70790036
chr19 4375844 4375863 REST JASPAR yes 112169881
chr19 4375877 4375881 LFA1 TRANSFAC yes 70790037
chr19 4375877 4375881 LFA1 TRANSFAC yes 112169882
chr19 4375897 4375909 INSM1 JASPAR yes 70790038
chr19 4375897 4375909 INSM1 JASPAR yes 112169883
chr19 4375901 4375916 NR2C2 JASPAR yes 70790039
chr19 4375901 4375916 NR2C2 JASPAR yes 112169884
chr19 4375904 4375908 LFA1 TRANSFAC yes 70790040
chr19 4375904 4375908 LFA1 TRANSFAC yes 112169885
chr19 4375910 4375923 JUN JASPAR yes 70790041
chr19 4375910 4375923 JUN JASPAR yes 112169886
chr19 4375912 4375927 JUND JASPAR yes 70790042
chr19 4375912 4375927 JUND JASPAR yes 112169887
chr19 4375914 4375928 ATF7 JASPAR yes 70790043
chr19 4375914 4375928 BATF3 JASPAR yes 70790044
chr19 4375914 4375928 ATF7 JASPAR yes 112169888
chr19 4375914 4375928 BATF3 JASPAR yes 112169889
chr19 4375915 4375927 JDP2 JASPAR yes 70790045
chr19 4375915 4375927 JDP2 JASPAR yes 112169890
chr19 4375915 4375928 ATF4 JASPAR yes 70790046
chr19 4375915 4375928 ATF4 JASPAR yes 112169891
chr19 4375915 4375930 JUND JASPAR yes 70790047
chr19 4375915 4375930 JUND JASPAR yes 112169892
chr19 4375916 4375929 JUN JASPAR yes 70790048
chr19 4375916 4375929 JUN JASPAR yes 112169893
chr19 4375917 4375924 JUN TRANSFAC yes 70790049
chr19 4375917 4375924 JUN TRANSFAC yes 112169894
chr19 4375923 4375933 GCM2 JASPAR yes 70790050
chr19 4375923 4375933 GCM2 JASPAR yes 112169895
chr19 4375955 4375961 TBP TRANSFAC yes 70790051
chr19 4375955 4375961 TBP TRANSFAC yes 112169896
chr19 4375990 4376003 JUN JASPAR yes 70790052
chr19 4375990 4376003 JUN JASPAR yes 112169897
chr19 4375991 4376004 ATF4 JASPAR yes 70790053
chr19 4375991 4376004 ATF4 JASPAR yes 112169898
chr19 4376007 4376022 TFAP2C JASPAR yes 70790054
chr19 4376007 4376022 TFAP2C JASPAR yes 112169899
chr19 4376013 4376023 GABPA JASPAR yes 70790055
chr19 4376013 4376023 GABPA JASPAR yes 112169900
chr19 4376013 4376024 FLI1 JASPAR yes 70790056
chr19 4376013 4376024 FLI1 JASPAR yes 112169901
chr19 4376016 4376031 HSF1 JASPAR yes 70790057
chr19 4376016 4376031 HSF1 JASPAR yes 112169902
chr19 4376051 4376068 ESR1 JASPAR yes 70790058
chr19 4376051 4376068 ESR1 JASPAR yes 112169903
chr19 4376051 4376069 ESR2 JASPAR yes 70790059
chr19 4376051 4376069 ESR2 JASPAR yes 112169904
chr19 4376052 4376062 SP1 JASPAR yes 70790060
chr19 4376052 4376062 SP1 JASPAR yes 112169905
chr19 4376052 4376072 ESR1 JASPAR yes 70790061
chr19 4376052 4376072 ESR1 JASPAR yes 112169906
chr19 4376053 4376057 LFA1 TRANSFAC yes 70790062
chr19 4376053 4376057 LFA1 TRANSFAC yes 112169907
chr19 4376053 4376068 RFX5 JASPAR yes 70790063
chr19 4376053 4376068 RFX5 JASPAR yes 112169908
chr19 4376060 4376068 MEIS2 JASPAR yes 70790064
chr19 4376060 4376068 MEIS3 JASPAR yes 70790065
chr19 4376060 4376068 MEIS2 JASPAR yes 112169909
chr19 4376060 4376068 MEIS3 JASPAR yes 112169910
chr19 4376061 4376073 PKNOX1 JASPAR yes 70790066
chr19 4376061 4376073 TGIF1 JASPAR yes 70790067
chr19 4376061 4376073 TGIF2 JASPAR yes 70790068
chr19 4376061 4376073 PKNOX1 JASPAR yes 112169911
chr19 4376061 4376073 TGIF1 JASPAR yes 112169912
chr19 4376061 4376073 TGIF2 JASPAR yes 112169913
chr19 4376078 4376087 SNAI2 JASPAR yes 70790069
chr19 4376078 4376087 SNAI2 JASPAR yes 112169914
chr19 4376078 4376088 ID4 JASPAR yes 70790070
chr19 4376078 4376088 TCF3 JASPAR yes 70790071
chr19 4376078 4376088 TCF4 JASPAR yes 70790072
chr19 4376078 4376088 ID4 JASPAR yes 112169915
chr19 4376078 4376088 TCF3 JASPAR yes 112169916
chr19 4376078 4376088 TCF4 JASPAR yes 112169917
chr19 4376093 4376107 ZIC1 JASPAR yes 70790073
chr19 4376093 4376107 ZIC1 JASPAR yes 112169918
chr19 4376101 4376106 SP1 TRANSFAC yes 70790074
chr19 4376101 4376106 SP1 TRANSFAC yes 112169919
chr19 4376107 4376117 RELA JASPAR yes 70790075
chr19 4376107 4376117 RELA JASPAR yes 112169920
SNP sites on vista28346[chr19:4375735-4376107]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 4375943 rs541349891 G A
ATF1 ATF3 CEBPB CTCF EBF1 EP300 GATA1 JUND MAZ NR2F2 POLR2A TAL1 TEAD4
5400352
chr19 4375963 rs372327604 C T
ATF1 ATF3 CEBPB CTCF EBF1 EP300 GATA1 JUND MAZ NR2F2 POLR2A TAL1 TEAD4
5400353
chr19 4376018 rs141554064 G C
ATF1 ATF3 CEBPB CTCF EP300 FLI1 GABPA GATA1 HSF1 JUND MAZ POLR2A TAL1 TEAD4 TFAP2C
5400354
chr19 4376056 rs529362572 G A
CTCF ESR1 ESR2 GATA1 JUND LFA1 MAZ POLR2A RFX5 SP1 TEAD4
5400355
chr19 4376072 rs117889916 G A
CTCF ESR1 GATA1 JUND MAZ PKNOX1 POLR2A TGIF1 TGIF2
5400356
Genes possibly regulated by vista28346[chr19:4375735-4376107]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 4278598 4290721 + SHD ENSG00000105251.6 4278598 0.95 1.0 16835 2863
chr19 4292229 4302428 - TMIGD2 ENSG00000167664.4 4302428 0.99 0.98 16836 26693
chr19 4304597 4323840 + FSD1 ENSG00000105255.6 4304597 0.93 1.0 16837 28862
chr19 4324040 4342783 - STAP2 ENSG00000178078.7 4342783 0.69 0.95 16838 67048
chr19 4343524 4360083 + MPND ENSG00000008382.11 4343524 0.71 1.0 16839 67789
chr19 4360367 4400544 - SH3GL1 ENSG00000141985.5 4400544 0.66 1.0 16840 75563
chr19 4402659 4445015 + CHAF1A ENSG00000167670.11 4402659 0.83 0.99 16841 73448
chr19 4444996 4457819 - UBXN6 ENSG00000167671.7 4457819 0.65 1.0 16842 18288
chr19 4472284 4502223 + HDGFRP2 ENSG00000167674.10 4472284 0.71 1.0 16843 3823
Expression level of Genes
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miRNAs possibly regulated by vista28346[chr19:4375735-4376107]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results