EnhancerDB
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  3. vista28347[chr19:4379386-4379764]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28347[chr19:4379386-4379764]
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Tissue distribution of vista28347
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Transcription factor that possibly regulate vista28347[chr19:4379386-4379764]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 4379458 4379729 CEBPB UCSC Txn Factor no Conserved 108371976
chr19 4379545 4379875 BHLHE40 UCSC Txn Factor no Conserved 108371998
chr19 4379399 4379407 MEIS2 JASPAR yes 70790076
chr19 4379399 4379407 MEIS3 JASPAR yes 70790077
chr19 4379399 4379407 MEIS2 JASPAR yes 112170382
chr19 4379399 4379407 MEIS3 JASPAR yes 112170383
chr19 4379415 4379419 NFE TRANSFAC yes 70790078
chr19 4379415 4379419 NFE TRANSFAC yes 112170384
chr19 4379419 4379434 FOXP1 JASPAR yes 70790079
chr19 4379419 4379434 FOXP1 JASPAR yes 112170385
chr19 4379420 4379435 FOXP1 JASPAR yes 70790080
chr19 4379420 4379435 FOXP1 JASPAR yes 112170386
chr19 4379421 4379436 FOXP1 JASPAR yes 70790081
chr19 4379421 4379436 FOXP1 JASPAR yes 112170387
chr19 4379422 4379437 FOXP1 JASPAR yes 70790082
chr19 4379422 4379437 FOXP1 JASPAR yes 112170388
chr19 4379422 4379443 IRF1 JASPAR yes 70790083
chr19 4379422 4379443 IRF1 JASPAR yes 112170389
chr19 4379423 4379438 FOXP1 JASPAR yes 70790084
chr19 4379423 4379438 FOXP1 JASPAR yes 112170390
chr19 4379423 4379444 IRF1 JASPAR yes 70790085
chr19 4379423 4379444 IRF1 JASPAR yes 112170391
chr19 4379424 4379439 FOXP1 JASPAR yes 70790086
chr19 4379424 4379439 FOXP1 JASPAR yes 112170392
chr19 4379428 4379443 FOXP1 JASPAR yes 70790087
chr19 4379428 4379443 FOXP1 JASPAR yes 112170393
chr19 4379430 4379442 FOXC2 JASPAR yes 70790088
chr19 4379430 4379442 FOXC2 JASPAR yes 112170394
chr19 4379454 4379469 PRDM1 JASPAR yes 70790089
chr19 4379454 4379469 PRDM1 JASPAR yes 112170395
chr19 4379460 4379474 JUN JASPAR yes 70790090
chr19 4379460 4379474 JUN JASPAR yes 112170396
chr19 4379462 4379473 BATF JASPAR yes 70790091
chr19 4379462 4379473 BATF JASPAR yes 112170397
chr19 4379463 4379474 JUNB JASPAR yes 70790092
chr19 4379463 4379474 JUNB JASPAR yes 112170398
chr19 4379464 4379475 FOS JASPAR yes 70790093
chr19 4379464 4379475 FOSL1 JASPAR yes 70790094
chr19 4379464 4379475 FOS JASPAR yes 112170399
chr19 4379464 4379475 FOSL1 JASPAR yes 112170400
chr19 4379465 4379474 JDP2 JASPAR yes 70790095
chr19 4379465 4379474 JDP2 JASPAR yes 112170401
chr19 4379466 4379477 BATF JASPAR yes 70790096
chr19 4379466 4379477 BATF JASPAR yes 112170402
chr19 4379492 4379503 NFKB1 JASPAR yes 70790097
chr19 4379492 4379503 NFKB1 JASPAR yes 112170403
chr19 4379493 4379503 NFKB1 JASPAR yes 70790098
chr19 4379493 4379503 REL JASPAR yes 70790099
chr19 4379493 4379503 NFKB1 JASPAR yes 112170404
chr19 4379493 4379503 REL JASPAR yes 112170405
chr19 4379499 4379505 MZF1 JASPAR yes 70790100
chr19 4379499 4379505 MZF1 JASPAR yes 112170406
chr19 4379515 4379523 TBX5 JASPAR yes 70790101
chr19 4379515 4379523 TBX5 JASPAR yes 112170407
chr19 4379515 4379524 ZEB1 JASPAR yes 70790102
chr19 4379515 4379524 ZEB1 JASPAR yes 112170408
chr19 4379515 4379527 NHLH1 JASPAR yes 70790103
chr19 4379515 4379527 NHLH1 JASPAR yes 112170409
chr19 4379516 4379526 ID4 JASPAR yes 70790104
chr19 4379516 4379526 NHLH1 JASPAR yes 70790105
chr19 4379516 4379526 TCF3 JASPAR yes 70790106
chr19 4379516 4379526 TCF4 JASPAR yes 70790107
chr19 4379516 4379526 ID4 JASPAR yes 112170410
chr19 4379516 4379526 NHLH1 JASPAR yes 112170411
chr19 4379516 4379526 TCF3 JASPAR yes 112170412
chr19 4379516 4379526 TCF4 JASPAR yes 112170413
chr19 4379517 4379526 SNAI2 JASPAR yes 70790108
chr19 4379517 4379526 SNAI2 JASPAR yes 112170414
chr19 4379518 4379523 USF2 TRANSFAC yes 70790109
chr19 4379518 4379523 USF2 TRANSFAC yes 112170415
chr19 4379525 4379536 NFE2L2 JASPAR yes 70790110
chr19 4379525 4379536 NFE2L2 JASPAR yes 112170416
chr19 4379527 4379531 NFE TRANSFAC yes 70790111
chr19 4379527 4379531 NFE TRANSFAC yes 112170417
chr19 4379527 4379540 SMAD2 JASPAR yes 70790112
chr19 4379527 4379540 SMAD2 JASPAR yes 112170418
chr19 4379530 4379541 TBX2 JASPAR yes 70790113
chr19 4379530 4379541 TBX2 JASPAR yes 112170419
chr19 4379532 4379540 MGA JASPAR yes 70790114
chr19 4379532 4379540 TBX15 JASPAR yes 70790115
chr19 4379532 4379540 TBX1 JASPAR yes 70790116
chr19 4379532 4379540 TBX4 JASPAR yes 70790117
chr19 4379532 4379540 TBX5 JASPAR yes 70790118
chr19 4379532 4379540 MGA JASPAR yes 112170420
chr19 4379532 4379540 TBX15 JASPAR yes 112170421
chr19 4379532 4379540 TBX1 JASPAR yes 112170422
chr19 4379532 4379540 TBX4 JASPAR yes 112170423
chr19 4379532 4379540 TBX5 JASPAR yes 112170424
chr19 4379541 4379553 PKNOX1 JASPAR yes 70790119
chr19 4379541 4379553 PKNOX2 JASPAR yes 70790120
chr19 4379541 4379553 TGIF2 JASPAR yes 70790121
chr19 4379542 4379552 NHLH1 JASPAR yes 70790122
chr19 4379580 4379584 H1TF2 TRANSFAC yes 70790123
chr19 4379580 4379584 NFE TRANSFAC yes 70790124
chr19 4379580 4379584 SRF TRANSFAC yes 70790125
chr19 4379590 4379602 TEAD1 JASPAR yes 70790126
chr19 4379591 4379599 TEAD3 JASPAR yes 70790127
chr19 4379597 4379601 NFE TRANSFAC yes 70790128
chr19 4379605 4379617 TAL1 JASPAR yes 70790129
chr19 4379607 4379617 TFAP4 JASPAR yes 70790130
chr19 4379613 4379632 REST JASPAR yes 70790131
chr19 4379618 4379628 NFIA JASPAR yes 70790132
chr19 4379619 4379628 NFIX JASPAR yes 70790133
chr19 4379620 4379626 NFIC JASPAR yes 70790134
chr19 4379623 4379635 NHLH1 JASPAR yes 70790135
chr19 4379623 4379636 ZBTB18 JASPAR yes 70790136
chr19 4379624 4379634 NHLH1 JASPAR yes 70790137
chr19 4379650 4379670 TP53 JASPAR yes 70790138
chr19 4379651 4379665 EBF1 JASPAR yes 70790139
chr19 4379652 4379667 TFAP2C JASPAR yes 70790140
chr19 4379653 4379664 EBF1 JASPAR yes 70790141
chr19 4379657 4379662 TFAP2A TRANSFAC yes 70790142
chr19 4379657 4379663 MZF1 JASPAR yes 70790143
chr19 4379657 4379670 NFKB1 JASPAR yes 70790144
chr19 4379657 4379670 NFKB2 JASPAR yes 70790145
chr19 4379658 4379668 NFKB1 JASPAR yes 70790146
chr19 4379658 4379669 NFKB1 JASPAR yes 70790147
chr19 4379659 4379669 NFKB1 JASPAR yes 70790148
chr19 4379659 4379669 RELA JASPAR yes 70790149
chr19 4379663 4379670 E2F1 TRANSFAC yes 70790150
chr19 4379667 4379672 SP1 TRANSFAC yes 70790151
chr19 4379689 4379710 ZNF263 JASPAR yes 70790152
chr19 4379697 4379707 GABPA JASPAR yes 70790153
chr19 4379697 4379710 ELF1 JASPAR yes 70790154
chr19 4379707 4379722 HSF1 JASPAR yes 70790155
chr19 4379708 4379721 HSF1 JASPAR yes 70790156
chr19 4379708 4379721 HSF2 JASPAR yes 70790157
chr19 4379708 4379721 HSF4 JASPAR yes 70790158
SNP sites on vista28347[chr19:4379386-4379764]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 4379434 rs554104810 A T
FOXC2 FOXP1 IRF1
5400404
chr19 4379435 rs577491300 A T
FOXC2 FOXP1 IRF1
5400405
chr19 4379436 rs116277348 A T
FOXC2 FOXP1 IRF1
5400406
chr19 4379563 rs143832063 C G,T
BHLHE40 CEBPB
5400407
chr19 4379608 rs190928205 A G
BHLHE40 CEBPB TAL1 TFAP4
5400408
chr19 4379610 rs552477340 C T
BHLHE40 CEBPB TAL1 TFAP4
5400409
chr19 4379615 rs74428867 G A
BHLHE40 CEBPB REST TAL1 TFAP4
5400410
chr19 4379748 rs148162071 G A,C
BHLHE40
5400411
Genes possibly regulated by vista28347[chr19:4379386-4379764]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 4292229 4302428 - TMIGD2 ENSG00000167664.4 4302428 0.99 0.98 16836 23042
chr19 4304597 4323840 + FSD1 ENSG00000105255.6 4304597 0.93 1.0 16837 25211
chr19 4324040 4342783 - STAP2 ENSG00000178078.7 4342783 0.69 0.95 16838 63397
chr19 4343524 4360083 + MPND ENSG00000008382.11 4343524 0.71 1.0 16839 64138
chr19 4360367 4400544 - SH3GL1 ENSG00000141985.5 4400544 0.66 1.0 16840 79220
chr19 4402659 4445015 + CHAF1A ENSG00000167670.11 4402659 0.83 0.99 16841 77105
chr19 4444996 4457819 - UBXN6 ENSG00000167671.7 4457819 0.65 1.0 16842 21945
chr19 4472284 4502223 + HDGFRP2 ENSG00000167674.10 4472284 0.71 1.0 16843 7480
Expression level of Genes
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miRNAs possibly regulated by vista28347[chr19:4379386-4379764]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results