EnhancerDB
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  3. vista28349[chr19:4393849-4394251]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28349[chr19:4393849-4394251]
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Tissue distribution of vista28349
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Transcription factor that possibly regulate vista28349[chr19:4393849-4394251]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 4393841 4393856 AR JASPAR yes 70790247
chr19 4393841 4393856 AR JASPAR yes 112172075
chr19 4393888 4393908 ESR1 JASPAR yes 70790248
chr19 4393888 4393908 ESR1 JASPAR yes 112172076
chr19 4393901 4393915 RORA JASPAR yes 70790249
chr19 4393901 4393915 RORA JASPAR yes 112172077
chr19 4393922 4393927 SP1 TRANSFAC yes 70790250
chr19 4393922 4393927 SP1 TRANSFAC yes 112172078
chr19 4393925 4393930 SP1 TRANSFAC yes 70790251
chr19 4393925 4393930 SP1 TRANSFAC yes 112172079
chr19 4393927 4393943 ZNF143 JASPAR yes 70790252
chr19 4393927 4393943 ZNF143 JASPAR yes 112172080
chr19 4393949 4393958 H4TF2 TRANSFAC yes 70790253
chr19 4393949 4393958 H4TF2 TRANSFAC yes 112172081
chr19 4393954 4393968 PLAG1 JASPAR yes 70790254
chr19 4393954 4393968 PLAG1 JASPAR yes 112172082
chr19 4394020 4394034 TCF7L2 JASPAR yes 70790255
chr19 4394020 4394034 TCF7L2 JASPAR yes 112172083
chr19 4394021 4394026 H4TF1 TRANSFAC yes 70790256
chr19 4394021 4394026 H4TF1 TRANSFAC yes 112172084
chr19 4394024 4394030 TCF1 TRANSFAC yes 70790257
chr19 4394024 4394030 TCF1 TRANSFAC yes 112172085
chr19 4394024 4394031 TCF4 TRANSFAC yes 70790258
chr19 4394024 4394031 TCF4 TRANSFAC yes 112172086
chr19 4394070 4394083 ATF4 JASPAR yes 70790259
chr19 4394070 4394083 ATF4 JASPAR yes 112172087
chr19 4394081 4394091 NFATC3 JASPAR yes 70790260
chr19 4394081 4394091 NFATC3 JASPAR yes 112172088
chr19 4394097 4394118 ZNF263 JASPAR yes 70790261
chr19 4394097 4394118 ZNF263 JASPAR yes 112172089
chr19 4394105 4394116 E2F6 JASPAR yes 70790262
chr19 4394105 4394116 E2F6 JASPAR yes 112172090
chr19 4394121 4394136 FOXP1 JASPAR yes 70790263
chr19 4394121 4394136 FOXP1 JASPAR yes 112172091
chr19 4394122 4394137 FOXP1 JASPAR yes 70790264
chr19 4394122 4394137 FOXP1 JASPAR yes 112172092
chr19 4394122 4394143 IRF1 JASPAR yes 70790265
chr19 4394122 4394143 IRF1 JASPAR yes 112172093
chr19 4394123 4394138 FOXP1 JASPAR yes 70790266
chr19 4394123 4394138 FOXP1 JASPAR yes 112172094
chr19 4394123 4394144 IRF1 JASPAR yes 70790267
chr19 4394123 4394144 IRF1 JASPAR yes 112172095
chr19 4394124 4394139 FOXP1 JASPAR yes 70790268
chr19 4394124 4394139 FOXP1 JASPAR yes 112172096
chr19 4394124 4394145 IRF1 JASPAR yes 70790269
chr19 4394124 4394145 IRF1 JASPAR yes 112172097
chr19 4394125 4394140 FOXP1 JASPAR yes 70790270
chr19 4394125 4394140 FOXP1 JASPAR yes 112172098
chr19 4394125 4394146 IRF1 JASPAR yes 70790271
chr19 4394125 4394146 IRF1 JASPAR yes 112172099
chr19 4394126 4394141 FOXP1 JASPAR yes 70790272
chr19 4394126 4394141 FOXP1 JASPAR yes 112172100
chr19 4394126 4394147 IRF1 JASPAR yes 70790273
chr19 4394126 4394147 IRF1 JASPAR yes 112172101
chr19 4394127 4394142 FOXP1 JASPAR yes 70790274
chr19 4394127 4394142 FOXP1 JASPAR yes 112172102
chr19 4394128 4394143 FOXP1 JASPAR yes 70790275
chr19 4394128 4394143 FOXP1 JASPAR yes 112172103
chr19 4394128 4394149 IRF1 JASPAR yes 70790276
chr19 4394128 4394149 IRF1 JASPAR yes 112172104
chr19 4394129 4394144 FOXP1 JASPAR yes 70790277
chr19 4394129 4394144 FOXP1 JASPAR yes 112172105
chr19 4394132 4394147 STAT2 JASPAR yes 70790278
chr19 4394132 4394147 STAT2 JASPAR yes 112172106
chr19 4394146 4394156 TEAD4 JASPAR yes 70790279
chr19 4394146 4394156 TEAD4 JASPAR yes 112172107
chr19 4394146 4394158 TEAD1 JASPAR yes 70790280
chr19 4394146 4394158 TEAD1 JASPAR yes 112172108
chr19 4394147 4394155 TEAD3 JASPAR yes 70790281
chr19 4394147 4394155 TEAD3 JASPAR yes 112172109
chr19 4394149 4394160 STAT3 JASPAR yes 70790282
chr19 4394149 4394160 STAT3 JASPAR yes 112172110
chr19 4394154 4394166 PKNOX1 JASPAR yes 70790283
chr19 4394154 4394166 PKNOX2 JASPAR yes 70790284
chr19 4394154 4394166 TGIF2 JASPAR yes 70790285
chr19 4394154 4394166 PKNOX1 JASPAR yes 112172111
chr19 4394154 4394166 PKNOX2 JASPAR yes 112172112
chr19 4394154 4394166 TGIF2 JASPAR yes 112172113
chr19 4394155 4394165 NHLH1 JASPAR yes 70790286
chr19 4394155 4394165 NHLH1 JASPAR yes 112172114
chr19 4394169 4394179 MZF1 JASPAR yes 70790287
chr19 4394169 4394179 MZF1 JASPAR yes 112172115
chr19 4394174 4394184 HMBOX1 JASPAR yes 70790288
chr19 4394174 4394184 HMBOX1 JASPAR yes 112172116
chr19 4394181 4394196 PRDM1 JASPAR yes 70790289
chr19 4394181 4394196 PRDM1 JASPAR yes 112172117
chr19 4394198 4394213 RFX5 JASPAR yes 70790290
chr19 4394198 4394213 RFX5 JASPAR yes 112172118
SNP sites on vista28349[chr19:4393849-4394251]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 4393967 rs125717 C A
PLAG1
5400599
chr19 4394086 rs183998868 T C
NFATC3
5400600
chr19 4394089 rs371088711 A G
NFATC3
5400601
Genes possibly regulated by vista28349[chr19:4393849-4394251]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 4292229 4302428 - TMIGD2 ENSG00000167664.4 4302428 0.99 0.98 16836 8579
chr19 4304597 4323840 + FSD1 ENSG00000105255.6 4304597 0.93 1.0 16837 10748
chr19 4324040 4342783 - STAP2 ENSG00000178078.7 4342783 0.69 0.95 16838 48934
chr19 4343524 4360083 + MPND ENSG00000008382.11 4343524 0.71 1.0 16839 49675
chr19 4360367 4400544 - SH3GL1 ENSG00000141985.5 4400544 0.66 1.0 16840 93707
chr19 4402659 4445015 + CHAF1A ENSG00000167670.11 4402659 0.83 0.99 16841 91592
chr19 4444996 4457819 - UBXN6 ENSG00000167671.7 4457819 0.65 1.0 16842 36432
chr19 4472284 4502223 + HDGFRP2 ENSG00000167674.10 4472284 0.71 1.0 16843 21967
Expression level of Genes
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miRNAs possibly regulated by vista28349[chr19:4393849-4394251]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results