EnhancerDB
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  3. vista28353[chr19:4563630-4564113]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28353[chr19:4563630-4564113]
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Tissue distribution of vista28353
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Transcription factor that possibly regulate vista28353[chr19:4563630-4564113]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 4563632 4563647 IRF9 JASPAR yes 70790418
chr19 4563632 4563647 IRF9 JASPAR yes 112173555
chr19 4563633 4563647 IRF7 JASPAR yes 70790419
chr19 4563633 4563647 IRF7 JASPAR yes 112173556
chr19 4563637 4563655 RARA JASPAR yes 70790420
chr19 4563637 4563655 RARA JASPAR yes 112173557
chr19 4563646 4563661 RFX5 JASPAR yes 70790421
chr19 4563646 4563661 RFX5 JASPAR yes 112173558
chr19 4563647 4563651 NFE TRANSFAC yes 70790422
chr19 4563647 4563651 NFE TRANSFAC yes 112173559
chr19 4563650 4563656 MZF1 JASPAR yes 70790423
chr19 4563650 4563656 MZF1 JASPAR yes 112173560
chr19 4563664 4563679 NR2C2 JASPAR yes 70790424
chr19 4563664 4563679 NR2C2 JASPAR yes 112173561
chr19 4563665 4563686 ZNF263 JASPAR yes 70790425
chr19 4563665 4563686 ZNF263 JASPAR yes 112173562
chr19 4563670 4563691 ZNF263 JASPAR yes 70790426
chr19 4563670 4563691 ZNF263 JASPAR yes 112173563
chr19 4563671 4563692 ZNF263 JASPAR yes 70790427
chr19 4563671 4563692 ZNF263 JASPAR yes 112173564
chr19 4563672 4563682 ZNF740 JASPAR yes 70790428
chr19 4563672 4563682 ZNF740 JASPAR yes 112173565
chr19 4563674 4563684 SP1 JASPAR yes 70790429
chr19 4563674 4563684 SP1 JASPAR yes 112173566
chr19 4563675 4563685 SP1 JASPAR yes 70790430
chr19 4563675 4563685 SP1 JASPAR yes 112173567
chr19 4563676 4563682 SP1 TRANSFAC yes 70790431
chr19 4563676 4563682 SP1 TRANSFAC yes 112173568
chr19 4563676 4563686 SP1 JASPAR yes 70790432
chr19 4563676 4563686 SP1 JASPAR yes 112173569
chr19 4563680 4563686 MZF1 JASPAR yes 70790433
chr19 4563680 4563686 MZF1 JASPAR yes 112173570
chr19 4563680 4563701 ZNF263 JASPAR yes 70790434
chr19 4563680 4563701 ZNF263 JASPAR yes 112173571
chr19 4563682 4563690 SP1 TRANSFAC yes 70790435
chr19 4563682 4563690 SP1 TRANSFAC yes 112173572
chr19 4563684 4563696 INSM1 JASPAR yes 70790436
chr19 4563684 4563696 INSM1 JASPAR yes 112173573
chr19 4563708 4563712 NFE TRANSFAC yes 70790437
chr19 4563708 4563712 NFE TRANSFAC yes 112173574
chr19 4563734 4563744 NFKB1 JASPAR yes 70790438
chr19 4563734 4563744 NFKB1 JASPAR yes 112173575
chr19 4563737 4563744 SPI1 JASPAR yes 70790439
chr19 4563737 4563744 SPI1 JASPAR yes 112173576
chr19 4563749 4563755 ESR1 TRANSFAC yes 70790440
chr19 4563749 4563755 ESR1 TRANSFAC yes 112173577
chr19 4563751 4563755 ESR1 TRANSFAC yes 70790441
chr19 4563751 4563755 ESR1 TRANSFAC yes 112173578
chr19 4563752 4563764 HNF1B JASPAR yes 70790442
chr19 4563752 4563764 HNF1B JASPAR yes 112173579
chr19 4563775 4563788 SMAD2 JASPAR yes 70790443
chr19 4563775 4563788 SMAD2 JASPAR yes 112173580
chr19 4563815 4563821 ZNF354C JASPAR yes 70790444
chr19 4563815 4563821 ZNF354C JASPAR yes 112173581
chr19 4563825 4563837 PKNOX1 JASPAR yes 70790445
chr19 4563825 4563837 TGIF1 JASPAR yes 70790446
chr19 4563825 4563837 TGIF2 JASPAR yes 70790447
chr19 4563825 4563837 PKNOX1 JASPAR yes 112173582
chr19 4563825 4563837 TGIF1 JASPAR yes 112173583
chr19 4563825 4563837 TGIF2 JASPAR yes 112173584
chr19 4563829 4563847 ESR2 JASPAR yes 70790448
chr19 4563829 4563847 ESR2 JASPAR yes 112173585
chr19 4563831 4563851 ESR1 JASPAR yes 70790449
chr19 4563831 4563851 ESR1 JASPAR yes 112173586
chr19 4563839 4563860 IRF1 JASPAR yes 70790450
chr19 4563839 4563860 IRF1 JASPAR yes 112173587
chr19 4563841 4563846 ETS2 TRANSFAC yes 70790451
chr19 4563841 4563846 ETS2 TRANSFAC yes 112173588
chr19 4563842 4563856 SPI1 JASPAR yes 70790452
chr19 4563842 4563856 SPIC JASPAR yes 70790453
chr19 4563842 4563856 SPI1 JASPAR yes 112173589
chr19 4563842 4563856 SPIC JASPAR yes 112173590
chr19 4563844 4563865 IRF1 JASPAR yes 70790454
chr19 4563844 4563865 IRF1 JASPAR yes 112173591
chr19 4563846 4563861 PRDM1 JASPAR yes 70790455
chr19 4563846 4563861 PRDM1 JASPAR yes 112173592
chr19 4563846 4563867 IRF1 JASPAR yes 70790456
chr19 4563846 4563867 IRF1 JASPAR yes 112173593
chr19 4563847 4563868 IRF1 JASPAR yes 70790457
chr19 4563847 4563868 IRF1 JASPAR yes 112173594
chr19 4563848 4563863 FOXP1 JASPAR yes 70790458
chr19 4563848 4563863 FOXP1 JASPAR yes 112173595
chr19 4563848 4563869 IRF1 JASPAR yes 70790459
chr19 4563848 4563869 IRF1 JASPAR yes 112173596
chr19 4563849 4563864 FOXP1 JASPAR yes 70790460
chr19 4563849 4563864 FOXP1 JASPAR yes 112173597
chr19 4563850 4563865 FOXP1 JASPAR yes 70790461
chr19 4563850 4563865 FOXP1 JASPAR yes 112173598
chr19 4563851 4563866 FOXP1 JASPAR yes 70790462
chr19 4563851 4563866 FOXP1 JASPAR yes 112173599
chr19 4563852 4563867 FOXP1 JASPAR yes 70790463
chr19 4563852 4563867 FOXP1 JASPAR yes 112173600
chr19 4563852 4563873 IRF1 JASPAR yes 70790464
chr19 4563852 4563873 IRF1 JASPAR yes 112173601
chr19 4563853 4563868 FOXP1 JASPAR yes 70790465
chr19 4563853 4563868 FOXP1 JASPAR yes 112173602
chr19 4563854 4563869 FOXP1 JASPAR yes 70790466
chr19 4563854 4563869 FOXP1 JASPAR yes 112173603
chr19 4563861 4563876 MEF2C JASPAR yes 70790467
chr19 4563861 4563876 MEF2C JASPAR yes 112173604
chr19 4563885 4563889 NFE TRANSFAC yes 70790468
chr19 4563885 4563889 NFE TRANSFAC yes 112173605
chr19 4563917 4563927 SREBF1 JASPAR yes 70790469
chr19 4563917 4563927 SREBF1 JASPAR yes 112173606
chr19 4563919 4563936 ESR1 JASPAR yes 70790470
chr19 4563919 4563936 ESR1 JASPAR yes 112173607
chr19 4563989 4563999 ID4 JASPAR yes 70790471
chr19 4563989 4563999 TCF3 JASPAR yes 70790472
chr19 4563989 4563999 TCF4 JASPAR yes 70790473
chr19 4563989 4563999 ID4 JASPAR yes 112173608
chr19 4563989 4563999 TCF3 JASPAR yes 112173609
chr19 4563989 4563999 TCF4 JASPAR yes 112173610
chr19 4564003 4564013 SP1 JASPAR yes 70790474
chr19 4564003 4564013 SP1 JASPAR yes 112173611
chr19 4564003 4564022 PAX5 JASPAR yes 70790475
chr19 4564003 4564022 PAX5 JASPAR yes 112173612
chr19 4564006 4564011 SP1 TRANSFAC yes 70790476
chr19 4564006 4564011 SP1 TRANSFAC yes 112173613
chr19 4564017 4564032 FOXP1 JASPAR yes 70790477
chr19 4564017 4564032 FOXP1 JASPAR yes 112173614
chr19 4564018 4564033 FOXP1 JASPAR yes 70790478
chr19 4564018 4564033 FOXP1 JASPAR yes 112173615
chr19 4564019 4564034 FOXP1 JASPAR yes 70790479
chr19 4564019 4564034 FOXP1 JASPAR yes 112173616
chr19 4564020 4564035 MEF2C JASPAR yes 70790480
chr19 4564020 4564035 MEF2C JASPAR yes 112173617
chr19 4564027 4564042 MEF2A JASPAR yes 70790481
chr19 4564027 4564042 MEF2A JASPAR yes 112173618
chr19 4564028 4564043 MEF2C JASPAR yes 70790482
chr19 4564028 4564043 MEF2C JASPAR yes 112173619
chr19 4564029 4564041 MEF2A JASPAR yes 70790483
chr19 4564029 4564041 MEF2B JASPAR yes 70790484
chr19 4564029 4564041 MEF2D JASPAR yes 70790485
chr19 4564029 4564041 MEF2A JASPAR yes 112173620
chr19 4564029 4564041 MEF2B JASPAR yes 112173621
chr19 4564029 4564041 MEF2D JASPAR yes 112173622
chr19 4564031 4564035 YY1 TRANSFAC yes 70790486
chr19 4564031 4564035 YY1 TRANSFAC yes 112173623
chr19 4564046 4564059 NFKB1 JASPAR yes 70790487
chr19 4564046 4564059 NFKB2 JASPAR yes 70790488
chr19 4564046 4564059 NFKB1 JASPAR yes 112173624
chr19 4564046 4564059 NFKB2 JASPAR yes 112173625
chr19 4564049 4564060 CEBPB JASPAR yes 70790489
chr19 4564049 4564060 CEBPB JASPAR yes 112173626
chr19 4564052 4564064 YY1 JASPAR yes 70790490
chr19 4564052 4564064 YY1 JASPAR yes 112173627
chr19 4564059 4564079 PPARG JASPAR yes 70790491
chr19 4564059 4564079 PPARG JASPAR yes 112173628
chr19 4564062 4564082 ESR1 JASPAR yes 70790492
chr19 4564062 4564082 ESR1 JASPAR yes 112173629
chr19 4564063 4564067 ESR1 TRANSFAC yes 70790493
chr19 4564063 4564067 ESR1 TRANSFAC yes 112173630
chr19 4564074 4564092 RARA JASPAR yes 70790494
chr19 4564074 4564092 RARA JASPAR yes 112173631
chr19 4564081 4564094 NR2F1 JASPAR yes 70790495
chr19 4564081 4564094 NR2F1 JASPAR yes 112173632
chr19 4564083 4564098 JUND JASPAR yes 70790496
chr19 4564083 4564098 JUND JASPAR yes 112173633
chr19 4564084 4564097 JUN JASPAR yes 70790497
chr19 4564084 4564097 JUN JASPAR yes 112173634
chr19 4564085 4564093 CREB1 JASPAR yes 70790498
chr19 4564085 4564093 CREB1 JASPAR yes 112173635
chr19 4564097 4564103 ZNF354C JASPAR yes 70790499
chr19 4564097 4564103 ZNF354C JASPAR yes 112173636
chr19 4564098 4564115 RXRA JASPAR yes 70790500
chr19 4564098 4564115 RXRA JASPAR yes 112173637
chr19 4564099 4564120 ZNF263 JASPAR yes 70790501
chr19 4564099 4564120 ZNF263 JASPAR yes 112173638
chr19 4564102 4564117 NR2C2 JASPAR yes 70790502
chr19 4564102 4564117 NR2C2 JASPAR yes 112173639
SNP sites on vista28353[chr19:4563630-4564113]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 4563634 rs114375929 C T
IRF7 IRF9
5401174
chr19 4563670 rs533384536 C T
NR2C2 ZNF263
5401175
chr19 4563715 rs531300374 G C no 5401176
chr19 4563754 rs76312494 T G
ESR1 HNF1B
5401177
chr19 4563799 rs146869492 G A,T no 5401178
chr19 4563810 rs185987749 A G no 5401179
chr19 4563937 rs4353572 T C no 5401180
chr19 4563954 rs539680803 C G,T no 5401181
chr19 4563984 rs190038513 T C no 5401182
chr19 4564018 rs538603356 AT A
FOXP1 PAX5
5401183
chr19 4564018 rs60272766 AT A
FOXP1 PAX5
5401184
chr19 4564061 rs181113894 G C
PPARG YY1
5401185
chr19 4564091 rs186352058 T C
CREB1 JUN JUND NR2F1 RARA
5401186
Genes possibly regulated by vista28353[chr19:4563630-4564113]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 4472284 4502223 + HDGFRP2 ENSG00000167674.10 4472284 0.71 1.0 16843 8654
chr19 4502204 4517716 - PLIN4 ENSG00000167676.3 4517716 0.94 1.0 16844 54086
chr19 4522543 4535236 - PLIN5 ENSG00000214456.4 4535236 0.87 1.0 16845 71606
chr19 4528439 4540079 - CTB-50L17.14 ENSG00000267385.1 4540079 0.98 1.0 16846 76449
chr19 4536421 4540486 - LRG1 ENSG00000171236.9 4540486 1.0 0.99 16847 76856
chr19 4542600 4559820 - SEMA6B ENSG00000167680.11 4559820 0.88 1.0 16848 96190
chr19 4639530 4655580 + TNFAIP8L1 ENSG00000185361.4 4639530 0.73 1.0 16849 24583
Expression level of Genes
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miRNAs possibly regulated by vista28353[chr19:4563630-4564113]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results