EnhancerDB
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  3. vista28355[chr19:4567864-4568201]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28355[chr19:4567864-4568201]
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Tissue distribution of vista28355
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Transcription factor that possibly regulate vista28355[chr19:4567864-4568201]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 4567539 4568157 CTCF UCSC Txn Factor no Conserved 108372287
chr19 4567623 4567891 RAD21 UCSC Txn Factor no Conserved 108372320
chr19 4567855 4567875 ESR1 JASPAR yes 70790528
chr19 4567855 4567875 ESR1 JASPAR yes 112174210
chr19 4567868 4567874 NFE2 TRANSFAC yes 70790529
chr19 4567868 4567874 NFE2 TRANSFAC yes 112174211
chr19 4567880 4567884 NFE TRANSFAC yes 70790530
chr19 4567880 4567884 NFE TRANSFAC yes 112174212
chr19 4567880 4567901 ZNF263 JASPAR yes 70790531
chr19 4567880 4567901 ZNF263 JASPAR yes 112174213
chr19 4567883 4567904 ZNF263 JASPAR yes 70790532
chr19 4567883 4567904 ZNF263 JASPAR yes 112174214
chr19 4567887 4567908 ZNF263 JASPAR yes 70790533
chr19 4567887 4567908 ZNF263 JASPAR yes 112174215
chr19 4567889 4567910 ZNF263 JASPAR yes 70790534
chr19 4567889 4567910 ZNF263 JASPAR yes 112174216
chr19 4567891 4567901 SP1 JASPAR yes 70790535
chr19 4567891 4567901 SP1 JASPAR yes 112174217
chr19 4567892 4567913 ZNF263 JASPAR yes 70790536
chr19 4567892 4567913 ZNF263 JASPAR yes 112174218
chr19 4567895 4567906 E2F6 JASPAR yes 70790537
chr19 4567895 4567906 E2F6 JASPAR yes 112174219
chr19 4567897 4567918 ZNF263 JASPAR yes 70790538
chr19 4567897 4567918 ZNF263 JASPAR yes 112174220
chr19 4567900 4567921 ZNF263 JASPAR yes 70790539
chr19 4567900 4567921 ZNF263 JASPAR yes 112174221
chr19 4567959 4567978 REST JASPAR yes 70790540
chr19 4567959 4567978 REST JASPAR yes 112174222
chr19 4567960 4567980 TP63 JASPAR yes 70790541
chr19 4567960 4567980 TP63 JASPAR yes 112174223
chr19 4567970 4567974 H4TF2 TRANSFAC yes 70790542
chr19 4567970 4567974 H4TF2 TRANSFAC yes 112174224
chr19 4567970 4567991 REST JASPAR yes 70790543
chr19 4567970 4567991 REST JASPAR yes 112174225
chr19 4567972 4567987 TFAP2A JASPAR yes 70790544
chr19 4567972 4567987 TFAP2C JASPAR yes 70790545
chr19 4567972 4567987 TFAP2A JASPAR yes 112174226
chr19 4567972 4567987 TFAP2C JASPAR yes 112174227
chr19 4567975 4567987 TFAP2A JASPAR yes 70790546
chr19 4567975 4567987 TFAP2B JASPAR yes 70790547
chr19 4567975 4567987 TFAP2C JASPAR yes 70790548
chr19 4567975 4567987 TFAP2A JASPAR yes 112174228
chr19 4567975 4567987 TFAP2B JASPAR yes 112174229
chr19 4567975 4567987 TFAP2C JASPAR yes 112174230
chr19 4567975 4567990 TFAP2A JASPAR yes 70790549
chr19 4567975 4567990 TFAP2C JASPAR yes 70790550
chr19 4567975 4567990 TFAP2A JASPAR yes 112174231
chr19 4567975 4567990 TFAP2C JASPAR yes 112174232
chr19 4567976 4567985 TFAP2A JASPAR yes 70790551
chr19 4567976 4567985 TFAP2A JASPAR yes 112174233
chr19 4567977 4567986 TFAP2A JASPAR yes 70790552
chr19 4567977 4567986 TFAP2A JASPAR yes 112174234
chr19 4568012 4568025 NFKB1 JASPAR yes 70790553
chr19 4568012 4568025 NFKB2 JASPAR yes 70790554
chr19 4568012 4568025 NFKB1 JASPAR yes 112174235
chr19 4568012 4568025 NFKB2 JASPAR yes 112174236
chr19 4568013 4568023 NFKB1 JASPAR yes 70790555
chr19 4568013 4568023 RELA JASPAR yes 70790556
chr19 4568013 4568023 NFKB1 JASPAR yes 112174237
chr19 4568013 4568023 RELA JASPAR yes 112174238
chr19 4568013 4568024 NFKB1 JASPAR yes 70790557
chr19 4568013 4568024 NFKB1 JASPAR yes 112174239
chr19 4568021 4568035 PLAG1 JASPAR yes 70790558
chr19 4568021 4568035 PLAG1 JASPAR yes 112174240
chr19 4568040 4568051 FLI1 JASPAR yes 70790559
chr19 4568040 4568051 FLI1 JASPAR yes 112174241
chr19 4568041 4568051 ETV6 JASPAR yes 70790560
chr19 4568041 4568051 ETV6 JASPAR yes 112174242
chr19 4568041 4568054 ELF1 JASPAR yes 70790561
chr19 4568041 4568054 ELF1 JASPAR yes 112174243
chr19 4568042 4568049 SPI1 JASPAR yes 70790562
chr19 4568042 4568049 SPI1 JASPAR yes 112174244
chr19 4568042 4568050 EHF JASPAR yes 70790563
chr19 4568042 4568050 EHF JASPAR yes 112174245
chr19 4568049 4568059 ETV3 JASPAR yes 70790564
chr19 4568049 4568059 ETV3 JASPAR yes 112174246
chr19 4568056 4568060 ESR1 TRANSFAC yes 70790565
chr19 4568056 4568060 ESR1 TRANSFAC yes 112174247
chr19 4568082 4568097 STAT1 JASPAR yes 70790566
chr19 4568082 4568097 STAT1 JASPAR yes 112174248
chr19 4568083 4568091 EHF JASPAR yes 70790567
chr19 4568083 4568091 EHF JASPAR yes 112174249
chr19 4568084 4568095 STAT1 JASPAR yes 70790568
chr19 4568084 4568095 STAT3 JASPAR yes 70790569
chr19 4568084 4568095 STAT1 JASPAR yes 112174250
chr19 4568084 4568095 STAT3 JASPAR yes 112174251
chr19 4568099 4568114 NR2C2 JASPAR yes 70790570
chr19 4568099 4568114 NR2C2 JASPAR yes 112174252
chr19 4568108 4568118 ZNF740 JASPAR yes 70790571
chr19 4568108 4568118 ZNF740 JASPAR yes 112174253
chr19 4568111 4568117 MZF1 JASPAR yes 70790572
chr19 4568111 4568117 MZF1 JASPAR yes 112174254
chr19 4568112 4568133 ZNF263 JASPAR yes 70790573
chr19 4568112 4568133 ZNF263 JASPAR yes 112174255
chr19 4568117 4568138 ZNF263 JASPAR yes 70790574
chr19 4568117 4568138 ZNF263 JASPAR yes 112174256
chr19 4568124 4568145 ZNF263 JASPAR yes 70790575
chr19 4568124 4568145 ZNF263 JASPAR yes 112174257
chr19 4568126 4568147 ZNF263 JASPAR yes 70790576
chr19 4568126 4568147 ZNF263 JASPAR yes 112174258
chr19 4568131 4568141 SP1 JASPAR yes 70790577
chr19 4568131 4568141 SP1 JASPAR yes 112174259
chr19 4568181 4568193 TAL1 JASPAR yes 70790578
chr19 4568181 4568193 TAL1 JASPAR yes 112174260
chr19 4568182 4568194 NHLH1 JASPAR yes 70790579
chr19 4568182 4568194 NHLH1 JASPAR yes 112174261
chr19 4568182 4568195 ZBTB18 JASPAR yes 70790580
chr19 4568182 4568195 ZBTB18 JASPAR yes 112174262
chr19 4568183 4568193 FIGLA JASPAR yes 70790581
chr19 4568183 4568193 MSC JASPAR yes 70790582
chr19 4568183 4568193 MYF6 JASPAR yes 70790583
chr19 4568183 4568193 NHLH1 JASPAR yes 70790584
chr19 4568183 4568193 TFAP4 JASPAR yes 70790585
chr19 4568183 4568193 FIGLA JASPAR yes 112174263
chr19 4568183 4568193 MSC JASPAR yes 112174264
chr19 4568183 4568193 MYF6 JASPAR yes 112174265
chr19 4568183 4568193 NHLH1 JASPAR yes 112174266
chr19 4568183 4568193 TFAP4 JASPAR yes 112174267
chr19 4568188 4568200 GLI2 JASPAR yes 70790586
chr19 4568188 4568200 GLI2 JASPAR yes 112174268
chr19 4568191 4568200 HIC2 JASPAR yes 70790587
chr19 4568191 4568200 HIC2 JASPAR yes 112174269
chr19 4568194 4568198 LFA1 TRANSFAC yes 70790588
chr19 4568194 4568198 LFA1 TRANSFAC yes 112174270
SNP sites on vista28355[chr19:4567864-4568201]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 4567920 rs143196434 T C
CTCF ZNF263
5401266
chr19 4567935 rs11880368 A C
CTCF
5401267
chr19 4567969 rs145504715 A G
CTCF REST TP63
5401268
chr19 4568036 rs11883321 G A
CTCF
5401269
chr19 4568157 rs36000725 G A,C
CTCF
5401270
Genes possibly regulated by vista28355[chr19:4567864-4568201]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 4472284 4502223 + HDGFRP2 ENSG00000167674.10 4472284 0.71 1.0 16843 4420
chr19 4502204 4517716 - PLIN4 ENSG00000167676.3 4517716 0.94 1.0 16844 49852
chr19 4522543 4535236 - PLIN5 ENSG00000214456.4 4535236 0.87 1.0 16845 67372
chr19 4528439 4540079 - CTB-50L17.14 ENSG00000267385.1 4540079 0.98 1.0 16846 72215
chr19 4536421 4540486 - LRG1 ENSG00000171236.9 4540486 1.0 0.99 16847 72622
chr19 4542600 4559820 - SEMA6B ENSG00000167680.11 4559820 0.88 1.0 16848 91956
chr19 4639530 4655580 + TNFAIP8L1 ENSG00000185361.4 4639530 0.73 1.0 16849 28671
Expression level of Genes
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miRNAs possibly regulated by vista28355[chr19:4567864-4568201]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results