EnhancerDB
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  3. vista28359[chr19:4593399-4593778]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28359[chr19:4593399-4593778]
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Tissue distribution of vista28359
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Transcription factor that possibly regulate vista28359[chr19:4593399-4593778]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 4593399 4593414 FOXP1 JASPAR yes 70790768
chr19 4593399 4593414 FOXP1 JASPAR yes 112177188
chr19 4593400 4593406 TBP TRANSFAC yes 70790769
chr19 4593400 4593406 TBP TRANSFAC yes 112177189
chr19 4593400 4593415 FOXP1 JASPAR yes 70790770
chr19 4593400 4593415 FOXP1 JASPAR yes 112177190
chr19 4593400 4593421 IRF1 JASPAR yes 70790771
chr19 4593400 4593421 IRF1 JASPAR yes 112177191
chr19 4593401 4593416 FOXP1 JASPAR yes 70790772
chr19 4593401 4593416 FOXP1 JASPAR yes 112177192
chr19 4593403 4593418 FOXP1 JASPAR yes 70790773
chr19 4593403 4593418 FOXP1 JASPAR yes 112177193
chr19 4593445 4593449 LFA1 TRANSFAC yes 70790774
chr19 4593445 4593449 LFA1 TRANSFAC yes 112177194
chr19 4593464 4593468 NFE TRANSFAC yes 70790775
chr19 4593464 4593468 NFE TRANSFAC yes 112177195
chr19 4593464 4593469 GATA1 TRANSFAC yes 70790776
chr19 4593464 4593469 GATA1 TRANSFAC yes 112177196
chr19 4593464 4593470 GATA3 JASPAR yes 70790777
chr19 4593464 4593470 GATA3 JASPAR yes 112177197
chr19 4593485 4593500 HNF1A JASPAR yes 70790778
chr19 4593485 4593500 HNF1A JASPAR yes 112177198
chr19 4593495 4593498 MYB TRANSFAC yes 70790779
chr19 4593495 4593498 MYB TRANSFAC yes 112177199
chr19 4593498 4593518 TP53 JASPAR yes 70790780
chr19 4593498 4593518 TP53 JASPAR yes 112177200
chr19 4593500 4593504 LFA1 TRANSFAC yes 70790781
chr19 4593500 4593504 LFA1 TRANSFAC yes 112177201
chr19 4593500 4593520 TP63 JASPAR yes 70790782
chr19 4593500 4593520 TP63 JASPAR yes 112177202
chr19 4593501 4593519 TP73 JASPAR yes 70790783
chr19 4593501 4593519 TP73 JASPAR yes 112177203
chr19 4593576 4593593 ESR1 JASPAR yes 70790784
chr19 4593576 4593593 ESR1 JASPAR yes 112177204
chr19 4593576 4593594 ESR2 JASPAR yes 70790785
chr19 4593576 4593594 ESR2 JASPAR yes 112177205
chr19 4593594 4593605 CEBPB JASPAR yes 70790786
chr19 4593594 4593605 CEBPB JASPAR yes 112177206
chr19 4593595 4593606 CEBPA JASPAR yes 70790787
chr19 4593595 4593606 CEBPA JASPAR yes 112177207
chr19 4593605 4593617 TEAD1 JASPAR yes 70790788
chr19 4593605 4593617 TEAD1 JASPAR yes 112177208
chr19 4593611 4593630 RFX2 JASPAR yes 70790789
chr19 4593611 4593630 RFX2 JASPAR yes 112177209
chr19 4593616 4593635 PAX5 JASPAR yes 70790790
chr19 4593616 4593635 PAX5 JASPAR yes 112177210
chr19 4593618 4593622 LFA1 TRANSFAC yes 70790791
chr19 4593618 4593622 LFA1 TRANSFAC yes 112177211
chr19 4593639 4593654 MEF2C JASPAR yes 70790792
chr19 4593639 4593654 MEF2C JASPAR yes 112177212
chr19 4593640 4593655 MEF2A JASPAR yes 70790793
chr19 4593640 4593655 MEF2A JASPAR yes 112177213
chr19 4593641 4593653 MEF2A JASPAR yes 70790794
chr19 4593641 4593653 MEF2B JASPAR yes 70790795
chr19 4593641 4593653 MEF2D JASPAR yes 70790796
chr19 4593641 4593653 MEF2A JASPAR yes 112177214
chr19 4593641 4593653 MEF2B JASPAR yes 112177215
chr19 4593641 4593653 MEF2D JASPAR yes 112177216
chr19 4593642 4593652 MEF2A JASPAR yes 70790797
chr19 4593642 4593652 MEF2A JASPAR yes 112177217
chr19 4593643 4593658 FOXP1 JASPAR yes 70790798
chr19 4593643 4593658 FOXP1 JASPAR yes 112177218
chr19 4593646 4593667 IRF1 JASPAR yes 70790799
chr19 4593646 4593667 IRF1 JASPAR yes 112177219
chr19 4593656 4593671 FOXP1 JASPAR yes 70790800
chr19 4593656 4593671 FOXP1 JASPAR yes 112177220
chr19 4593665 4593671 HiNF-A TRANSFAC yes 70790801
chr19 4593665 4593671 HiNF-A TRANSFAC yes 112177221
chr19 4593679 4593690 FOSL1 JASPAR yes 70790802
chr19 4593679 4593690 FOSL1 JASPAR yes 112177222
chr19 4593680 4593691 JUNB JASPAR yes 70790803
chr19 4593680 4593691 JUNB JASPAR yes 112177223
chr19 4593693 4593698 ATF1 TRANSFAC yes 70790804
chr19 4593693 4593698 ATF1 TRANSFAC yes 112177224
chr19 4593694 4593714 TP63 JASPAR yes 70790805
chr19 4593694 4593714 TP63 JASPAR yes 112177225
chr19 4593695 4593713 TP53 JASPAR yes 70790806
chr19 4593695 4593713 TP63 JASPAR yes 70790807
chr19 4593695 4593713 TP73 JASPAR yes 70790808
chr19 4593695 4593713 TP53 JASPAR yes 112177226
chr19 4593695 4593713 TP63 JASPAR yes 112177227
chr19 4593695 4593713 TP73 JASPAR yes 112177228
chr19 4593696 4593716 TP53 JASPAR yes 70790809
chr19 4593696 4593716 TP53 JASPAR yes 112177229
chr19 4593697 4593712 TP53 JASPAR yes 70790810
chr19 4593697 4593712 TP53 JASPAR yes 112177230
chr19 4593702 4593712 MAX JASPAR yes 70790811
chr19 4593702 4593712 MAX JASPAR yes 112177231
chr19 4593702 4593722 TP53 JASPAR yes 70790812
chr19 4593702 4593722 TP53 JASPAR yes 112177232
chr19 4593710 4593726 POU4F3 JASPAR yes 70790813
chr19 4593710 4593726 POU4F3 JASPAR yes 112177233
chr19 4593713 4593724 FOS JASPAR yes 70790814
chr19 4593713 4593724 FOSL1 JASPAR yes 70790815
chr19 4593713 4593724 NFE2 JASPAR yes 70790816
chr19 4593713 4593724 FOS JASPAR yes 112177234
chr19 4593713 4593724 FOSL1 JASPAR yes 112177235
chr19 4593713 4593724 NFE2 JASPAR yes 112177236
chr19 4593714 4593723 JDP2 JASPAR yes 70790817
chr19 4593714 4593723 JDP2 JASPAR yes 112177237
chr19 4593714 4593728 JUN JASPAR yes 70790818
chr19 4593714 4593728 JUN JASPAR yes 112177238
chr19 4593720 4593724 YY1 TRANSFAC yes 70790819
chr19 4593720 4593724 YY1 TRANSFAC yes 112177239
chr19 4593720 4593735 JUND JASPAR yes 70790820
chr19 4593720 4593735 JUND JASPAR yes 112177240
chr19 4593721 4593734 JUN JASPAR yes 70790821
chr19 4593721 4593734 JUN JASPAR yes 112177241
chr19 4593724 4593734 POU6F2 JASPAR yes 70790822
chr19 4593724 4593734 POU6F2 JASPAR yes 112177242
chr19 4593728 4593732 YY1 TRANSFAC yes 70790823
chr19 4593728 4593732 YY1 TRANSFAC yes 112177243
chr19 4593729 4593741 HNF1B JASPAR yes 70790824
chr19 4593729 4593741 HNF1B JASPAR yes 112177244
chr19 4593735 4593750 NFYB JASPAR yes 70790825
chr19 4593735 4593750 NFYB JASPAR yes 112177245
chr19 4593738 4593756 NFYA JASPAR yes 70790826
chr19 4593738 4593756 NFYA JASPAR yes 112177246
chr19 4593740 4593751 CDX2 JASPAR yes 70790827
chr19 4593740 4593751 CDX2 JASPAR yes 112177247
chr19 4593741 4593752 HOXA10 JASPAR yes 70790828
chr19 4593741 4593752 HOXA10 JASPAR yes 112177248
chr19 4593742 4593746 H1TF2 TRANSFAC yes 70790829
chr19 4593742 4593746 NFE TRANSFAC yes 70790830
chr19 4593742 4593746 SRF TRANSFAC yes 70790831
chr19 4593742 4593746 H1TF2 TRANSFAC yes 112177249
chr19 4593742 4593746 NFE TRANSFAC yes 112177250
chr19 4593742 4593746 SRF TRANSFAC yes 112177251
chr19 4593742 4593751 CDX1 JASPAR yes 70790832
chr19 4593742 4593751 CDX1 JASPAR yes 112177252
chr19 4593742 4593752 HOXA13 JASPAR yes 70790833
chr19 4593742 4593752 HOXB13 JASPAR yes 70790834
chr19 4593742 4593752 HOXD13 JASPAR yes 70790835
chr19 4593742 4593752 HOXA13 JASPAR yes 112177253
chr19 4593742 4593752 HOXB13 JASPAR yes 112177254
chr19 4593742 4593752 HOXD13 JASPAR yes 112177255
chr19 4593772 4593776 YY1 TRANSFAC yes 70790836
chr19 4593772 4593776 YY1 TRANSFAC yes 112177256
SNP sites on vista28359[chr19:4593399-4593778]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 4593463 rs190040598 C G,T no 5401643
chr19 4593602 rs148444114 C T
CEBPA CEBPB
5401644
chr19 4593695 rs114025285 C T
ATF1 TP53 TP63 TP73
5401645
chr19 4593715 rs111487472 A G
FOS FOSL1 JDP2 JUN NFE2 POU4F3 TP53
5401646
Genes possibly regulated by vista28359[chr19:4593399-4593778]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 4502204 4517716 - PLIN4 ENSG00000167676.3 4517716 0.94 1.0 16844 24317
chr19 4522543 4535236 - PLIN5 ENSG00000214456.4 4535236 0.87 1.0 16845 41837
chr19 4528439 4540079 - CTB-50L17.14 ENSG00000267385.1 4540079 0.98 1.0 16846 46680
chr19 4536421 4540486 - LRG1 ENSG00000171236.9 4540486 1.0 0.99 16847 47087
chr19 4542600 4559820 - SEMA6B ENSG00000167680.11 4559820 0.88 1.0 16848 66421
chr19 4639530 4655580 + TNFAIP8L1 ENSG00000185361.4 4639530 0.73 1.0 16849 54248
chr19 4641386 4670382 - C19orf10 ENSG00000074842.3 4670382 0.77 1.0 16850 23396
Expression level of Genes
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miRNAs possibly regulated by vista28359[chr19:4593399-4593778]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results