EnhancerDB
  1. Home
  2. Enhancers
  3. vista28360[chr19:4620862-4621172]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28360[chr19:4620862-4621172]
Back to top
Tissue distribution of vista28360
Back to top
Transcription factor that possibly regulate vista28360[chr19:4620862-4621172]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 4620856 4620866 TBX21 JASPAR yes 70790837
chr19 4620856 4620866 TBX21 JASPAR yes 112178878
chr19 4620856 4620867 TBX20 JASPAR yes 70790838
chr19 4620856 4620867 TBX2 JASPAR yes 70790839
chr19 4620856 4620867 TBX20 JASPAR yes 112178879
chr19 4620856 4620867 TBX2 JASPAR yes 112178880
chr19 4620856 4620869 EOMES JASPAR yes 70790840
chr19 4620856 4620869 EOMES JASPAR yes 112178881
chr19 4620857 4620865 MGA JASPAR yes 70790841
chr19 4620857 4620865 TBX15 JASPAR yes 70790842
chr19 4620857 4620865 TBX1 JASPAR yes 70790843
chr19 4620857 4620865 TBX4 JASPAR yes 70790844
chr19 4620857 4620865 TBX5 JASPAR yes 70790845
chr19 4620857 4620865 MGA JASPAR yes 112178882
chr19 4620857 4620865 TBX15 JASPAR yes 112178883
chr19 4620857 4620865 TBX1 JASPAR yes 112178884
chr19 4620857 4620865 TBX4 JASPAR yes 112178885
chr19 4620857 4620865 TBX5 JASPAR yes 112178886
chr19 4620857 4620867 TBR1 JASPAR yes 70790846
chr19 4620857 4620867 TBR1 JASPAR yes 112178887
chr19 4620864 4620885 ZNF263 JASPAR yes 70790847
chr19 4620864 4620885 ZNF263 JASPAR yes 112178888
chr19 4620868 4620889 ZNF263 JASPAR yes 70790848
chr19 4620868 4620889 ZNF263 JASPAR yes 112178889
chr19 4620870 4620891 ZNF263 JASPAR yes 70790849
chr19 4620870 4620891 ZNF263 JASPAR yes 112178890
chr19 4620871 4620892 ZNF263 JASPAR yes 70790850
chr19 4620871 4620892 ZNF263 JASPAR yes 112178891
chr19 4620874 4620884 GCM2 JASPAR yes 70790851
chr19 4620874 4620884 GCM2 JASPAR yes 112178892
chr19 4620875 4620885 ZNF740 JASPAR yes 70790852
chr19 4620875 4620885 ZNF740 JASPAR yes 112178893
chr19 4620880 4620901 ZNF263 JASPAR yes 70790853
chr19 4620880 4620901 ZNF263 JASPAR yes 112178894
chr19 4620898 4620917 RFX2 JASPAR yes 70790854
chr19 4620898 4620917 RFX2 JASPAR yes 112178895
chr19 4620900 4620915 RFX5 JASPAR yes 70790855
chr19 4620900 4620915 RFX5 JASPAR yes 112178896
chr19 4620920 4620933 SMAD2 JASPAR yes 70790856
chr19 4620920 4620933 SMAD2 JASPAR yes 112178897
chr19 4620941 4620962 REST JASPAR yes 70790857
chr19 4620941 4620962 REST JASPAR yes 112178898
chr19 4620942 4620961 REST JASPAR yes 70790858
chr19 4620942 4620961 REST JASPAR yes 112178899
chr19 4620945 4620949 NFE TRANSFAC yes 70790859
chr19 4620945 4620949 NFE TRANSFAC yes 112178900
chr19 4620986 4620990 YY1 TRANSFAC yes 70790860
chr19 4620986 4620990 YY1 TRANSFAC yes 112178901
chr19 4620997 4621012 FOXP1 JASPAR yes 70790861
chr19 4620997 4621012 FOXP1 JASPAR yes 112178902
chr19 4621020 4621025 GATA2 JASPAR yes 70790862
chr19 4621020 4621025 GATA2 JASPAR yes 112178903
chr19 4621022 4621028 MZF1 JASPAR yes 70790863
chr19 4621022 4621028 MZF1 JASPAR yes 112178904
chr19 4621055 4621067 INSM1 JASPAR yes 70790864
chr19 4621055 4621067 INSM1 JASPAR yes 112178905
chr19 4621092 4621107 AR JASPAR yes 70790865
chr19 4621092 4621107 AR JASPAR yes 112178906
SNP sites on vista28360[chr19:4620862-4621172]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 4620978 rs77023771 G A no 5401931
Genes possibly regulated by vista28360[chr19:4620862-4621172]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 4522543 4535236 - PLIN5 ENSG00000214456.4 4535236 0.87 1.0 16845 14374
chr19 4528439 4540079 - CTB-50L17.14 ENSG00000267385.1 4540079 0.98 1.0 16846 19217
chr19 4536421 4540486 - LRG1 ENSG00000171236.9 4540486 1.0 0.99 16847 19624
chr19 4542600 4559820 - SEMA6B ENSG00000167680.11 4559820 0.88 1.0 16848 38958
chr19 4639530 4655580 + TNFAIP8L1 ENSG00000185361.4 4639530 0.73 1.0 16849 81642
chr19 4641386 4670382 - C19orf10 ENSG00000074842.3 4670382 0.77 1.0 16850 50790
Expression level of Genes
Back to top
miRNAs possibly regulated by vista28360[chr19:4620862-4621172]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results