EnhancerDB
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  3. vista2837[chr1:109499781-109500180]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2837[chr1:109499781-109500180]
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Tissue distribution of vista2837
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Transcription factor that possibly regulate vista2837[chr1:109499781-109500180]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 109499801 109499814 ZBTB18 JASPAR yes 31407037
chr1 109499801 109499814 ZBTB18 JASPAR yes 118346271
chr1 109499824 109499834 RORA JASPAR yes 31407038
chr1 109499824 109499834 RORA JASPAR yes 118346272
chr1 109499829 109499833 ESR1 TRANSFAC yes 31407039
chr1 109499829 109499833 ESR1 TRANSFAC yes 118346273
chr1 109499841 109499845 YY1 TRANSFAC yes 31407040
chr1 109499841 109499845 YY1 TRANSFAC yes 118346274
chr1 109499850 109499855 ETS2 TRANSFAC yes 31407041
chr1 109499850 109499855 ETS2 TRANSFAC yes 118346275
chr1 109499898 109499912 XBP1 JASPAR yes 31407042
chr1 109499898 109499912 XBP1 JASPAR yes 118346276
chr1 109499899 109499913 CREB3 JASPAR yes 31407043
chr1 109499899 109499913 CREB3L1 JASPAR yes 31407044
chr1 109499899 109499913 CREB3 JASPAR yes 118346277
chr1 109499899 109499913 CREB3L1 JASPAR yes 118346278
chr1 109499908 109499918 HMBOX1 JASPAR yes 31407045
chr1 109499908 109499918 HMBOX1 JASPAR yes 118346279
chr1 109499934 109499939 GATA2 JASPAR yes 31407046
chr1 109499934 109499939 GATA2 JASPAR yes 118346280
chr1 109499943 109499948 GATA2 JASPAR yes 31407047
chr1 109499943 109499948 GATA2 JASPAR yes 118346281
chr1 109499980 109499992 NHLH1 JASPAR yes 31407048
chr1 109499980 109499992 NHLH1 JASPAR yes 118346282
chr1 109499981 109499991 NHLH1 JASPAR yes 31407049
chr1 109499981 109499991 NHLH1 JASPAR yes 118346283
chr1 109500001 109500014 NFKB1 JASPAR yes 31407050
chr1 109500001 109500014 NFKB2 JASPAR yes 31407051
chr1 109500001 109500014 NFKB1 JASPAR yes 118346284
chr1 109500001 109500014 NFKB2 JASPAR yes 118346285
chr1 109500002 109500013 NFKB1 JASPAR yes 31407052
chr1 109500002 109500013 NFKB1 JASPAR yes 118346286
chr1 109500002 109500015 NFKB1 JASPAR yes 31407053
chr1 109500002 109500015 NFKB1 JASPAR yes 118346287
chr1 109500003 109500013 NFKB1 JASPAR yes 31407054
chr1 109500003 109500013 RELA JASPAR yes 31407055
chr1 109500003 109500013 NFKB1 JASPAR yes 118346288
chr1 109500003 109500013 RELA JASPAR yes 118346289
chr1 109500003 109500014 NFKB1 JASPAR yes 31407056
chr1 109500003 109500014 NFKB1 JASPAR yes 118346290
chr1 109500004 109500014 RELA JASPAR yes 31407057
chr1 109500004 109500014 REL JASPAR yes 31407058
chr1 109500004 109500014 RELA JASPAR yes 118346291
chr1 109500004 109500014 REL JASPAR yes 118346292
chr1 109500008 109500028 ESR1 JASPAR yes 31407059
chr1 109500008 109500028 ESR1 JASPAR yes 118346293
chr1 109500011 109500029 ESR2 JASPAR yes 31407060
chr1 109500011 109500029 ESR2 JASPAR yes 118346294
chr1 109500012 109500030 ESR2 JASPAR yes 31407061
chr1 109500012 109500030 ESR2 JASPAR yes 118346295
chr1 109500013 109500033 ESR1 JASPAR yes 31407062
chr1 109500013 109500033 ESR1 JASPAR yes 118346296
chr1 109500022 109500037 TFAP2A JASPAR yes 31407063
chr1 109500022 109500037 TFAP2C JASPAR yes 31407064
chr1 109500022 109500037 TFAP2A JASPAR yes 118346297
chr1 109500022 109500037 TFAP2C JASPAR yes 118346298
chr1 109500023 109500034 EBF1 JASPAR yes 31407065
chr1 109500023 109500034 EBF1 JASPAR yes 118346299
chr1 109500029 109500036 CEBPA TRANSFAC yes 31407066
chr1 109500029 109500036 CEBPA TRANSFAC yes 118346300
chr1 109500034 109500038 LFA1 TRANSFAC yes 31407067
chr1 109500034 109500038 LFA1 TRANSFAC yes 118346301
chr1 109500052 109500062 ID4 JASPAR yes 31407068
chr1 109500052 109500062 TCF4 JASPAR yes 31407069
chr1 109500052 109500062 ID4 JASPAR yes 118346302
chr1 109500052 109500062 TCF4 JASPAR yes 118346303
chr1 109500054 109500059 USF2 TRANSFAC yes 31407070
chr1 109500054 109500059 USF2 TRANSFAC yes 118346304
chr1 109500061 109500073 SRF JASPAR yes 31407071
chr1 109500061 109500073 SRF JASPAR yes 118346305
chr1 109500072 109500082 FIGLA JASPAR yes 31407072
chr1 109500072 109500082 TCF3 JASPAR yes 31407073
chr1 109500072 109500082 FIGLA JASPAR yes 118346306
chr1 109500072 109500082 TCF3 JASPAR yes 118346307
chr1 109500074 109500079 USF2 TRANSFAC yes 31407074
chr1 109500074 109500079 USF2 TRANSFAC yes 118346308
chr1 109500083 109500097 GLIS3 JASPAR yes 31407075
chr1 109500083 109500097 GLIS3 JASPAR yes 118346309
chr1 109500083 109500098 ZIC4 JASPAR yes 31407076
chr1 109500083 109500098 ZIC4 JASPAR yes 118346310
chr1 109500092 109500101 NKX3-2 JASPAR yes 31407077
chr1 109500092 109500101 NKX3-2 JASPAR yes 118346311
chr1 109500103 109500121 IRF2 JASPAR yes 31407078
chr1 109500103 109500121 IRF2 JASPAR yes 118346312
chr1 109500104 109500125 IRF1 JASPAR yes 31407079
chr1 109500104 109500125 IRF1 JASPAR yes 118346313
chr1 109500106 109500121 PRDM1 JASPAR yes 31407080
chr1 109500106 109500121 PRDM1 JASPAR yes 118346314
chr1 109500108 109500120 IRF1 JASPAR yes 31407081
chr1 109500108 109500120 IRF1 JASPAR yes 118346315
chr1 109500108 109500122 IRF7 JASPAR yes 31407082
chr1 109500108 109500122 IRF8 JASPAR yes 31407083
chr1 109500108 109500122 IRF7 JASPAR yes 118346316
chr1 109500108 109500122 IRF8 JASPAR yes 118346317
chr1 109500108 109500128 TBX19 JASPAR yes 31407084
chr1 109500108 109500128 TBX19 JASPAR yes 118346318
chr1 109500110 109500126 T JASPAR yes 31407085
chr1 109500110 109500126 T JASPAR yes 118346319
chr1 109500111 109500126 LEF1 JASPAR yes 31407086
chr1 109500111 109500126 LEF1 JASPAR yes 118346320
chr1 109500112 109500126 TCF7L2 JASPAR yes 31407087
chr1 109500112 109500126 TCF7L2 JASPAR yes 118346321
chr1 109500130 109500140 PAX3 JASPAR yes 31407088
chr1 109500130 109500140 PAX7 JASPAR yes 31407089
chr1 109500130 109500140 PAX3 JASPAR yes 118346322
chr1 109500130 109500140 PAX7 JASPAR yes 118346323
chr1 109500134 109500145 PHOX2A JASPAR yes 31407090
chr1 109500134 109500145 PROP1 JASPAR yes 31407091
chr1 109500134 109500145 PHOX2A JASPAR yes 118346324
chr1 109500134 109500145 PROP1 JASPAR yes 118346325
chr1 109500140 109500144 YY1 TRANSFAC yes 31407092
chr1 109500140 109500144 YY1 TRANSFAC yes 118346326
chr1 109500141 109500150 CDX1 JASPAR yes 31407093
chr1 109500141 109500150 CDX1 JASPAR yes 118346327
chr1 109500141 109500152 CDX2 JASPAR yes 31407094
chr1 109500141 109500152 CDX2 JASPAR yes 118346328
chr1 109500171 109500175 YY1 TRANSFAC yes 31407095
chr1 109500171 109500175 YY1 TRANSFAC yes 118346329
chr1 109500178 109500182 TEAD2 TRANSFAC yes 31407096
chr1 109500178 109500182 TEAD2 TRANSFAC yes 118346330
chr1 109500180 109500183 MYB TRANSFAC yes 31407097
chr1 109500180 109500183 MYB TRANSFAC yes 118346331
SNP sites on vista2837[chr1:109499781-109500180]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 109499961 rs116297569 A C no 544184
chr1 109500105 rs144760691 A G
IRF1 IRF2
544185
Genes possibly regulated by vista2837[chr1:109499781-109500180]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 109358520 109506106 - AKNAD1 ENSG00000162641.14 109506106 0.95 0.99 963 94074
chr1 109417972 109477167 + GPSM2 ENSG00000121957.8 109417972 0.88 1.0 964 18191
chr1 109472130 109506111 - CLCC1 ENSG00000121940.11 109506111 0.55 0.99 965 94069
chr1 109512836 109584850 - WDR47 ENSG00000085433.11 109584850 0.73 0.99 966 15330
Expression level of Genes
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miRNAs possibly regulated by vista2837[chr1:109499781-109500180]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results