EnhancerDB
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  3. vista28373[chr19:4976440-4976890]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28373[chr19:4976440-4976890]
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Tissue distribution of vista28373
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Transcription factor that possibly regulate vista28373[chr19:4976440-4976890]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 4976366 4976661 ESR1 UCSC Txn Factor no Conserved 108374118
chr19 4976414 4976738 CEBPB UCSC Txn Factor no Conserved 108374135
chr19 4976416 4976859 CTCF UCSC Txn Factor no Conserved 108374138
chr19 4976512 4976528 SOX4 JASPAR yes 70791374
chr19 4976512 4976528 SOX4 JASPAR yes 112201263
chr19 4976512 4976532 ESR1 JASPAR yes 70791375
chr19 4976512 4976532 ESR1 JASPAR yes 112201264
chr19 4976516 4976533 ESR1 JASPAR yes 70791376
chr19 4976516 4976533 ESR1 JASPAR yes 112201265
chr19 4976516 4976534 ESR1 JASPAR yes 70791377
chr19 4976516 4976534 ESR2 JASPAR yes 70791378
chr19 4976516 4976534 ESR1 JASPAR yes 112201266
chr19 4976516 4976534 ESR2 JASPAR yes 112201267
chr19 4976517 4976532 ESR2 JASPAR yes 70791379
chr19 4976517 4976532 ESR2 JASPAR yes 112201268
chr19 4976517 4976537 ESR1 JASPAR yes 70791380
chr19 4976517 4976537 ESR1 JASPAR yes 112201269
chr19 4976525 4976536 NFE2L2 JASPAR yes 70791381
chr19 4976525 4976536 NFE2L2 JASPAR yes 112201270
chr19 4976547 4976556 SRY JASPAR yes 70791382
chr19 4976547 4976556 SRY JASPAR yes 112201271
chr19 4976555 4976565 GABPA JASPAR yes 70791383
chr19 4976555 4976565 GABPA JASPAR yes 112201272
chr19 4976556 4976561 ETS2 TRANSFAC yes 70791384
chr19 4976556 4976561 ETS2 TRANSFAC yes 112201273
chr19 4976567 4976578 CEBPB JASPAR yes 70791385
chr19 4976567 4976578 CEBPB JASPAR yes 112201274
chr19 4976568 4976578 CEBPB JASPAR yes 70791386
chr19 4976568 4976578 CEBPD JASPAR yes 70791387
chr19 4976568 4976578 CEBPE JASPAR yes 70791388
chr19 4976568 4976578 CEBPG JASPAR yes 70791389
chr19 4976568 4976578 CEBPB JASPAR yes 112201275
chr19 4976568 4976578 CEBPD JASPAR yes 112201276
chr19 4976568 4976578 CEBPE JASPAR yes 112201277
chr19 4976568 4976578 CEBPG JASPAR yes 112201278
chr19 4976568 4976579 CEBPA JASPAR yes 70791390
chr19 4976568 4976579 CEBPA JASPAR yes 112201279
chr19 4976586 4976598 IRF1 JASPAR yes 70791391
chr19 4976586 4976598 IRF1 JASPAR yes 112201280
chr19 4976588 4976594 TCF4 TRANSFAC yes 70791392
chr19 4976588 4976594 TCF4 TRANSFAC yes 112201281
chr19 4976628 4976644 GLIS1 JASPAR yes 70791393
chr19 4976628 4976644 GLIS1 JASPAR yes 112201282
chr19 4976640 4976650 SP1 JASPAR yes 70791394
chr19 4976640 4976650 SP1 JASPAR yes 112201283
chr19 4976642 4976648 MAZ TRANSFAC yes 70791395
chr19 4976642 4976648 MAZ TRANSFAC yes 112201284
chr19 4976646 4976656 SP1 JASPAR yes 70791396
chr19 4976646 4976656 SP1 JASPAR yes 112201285
chr19 4976647 4976651 LFA1 TRANSFAC yes 70791397
chr19 4976647 4976651 LFA1 TRANSFAC yes 112201286
chr19 4976677 4976681 NFE TRANSFAC yes 70791398
chr19 4976677 4976681 NFE TRANSFAC yes 112201287
chr19 4976716 4976721 GATA2 JASPAR yes 70791399
chr19 4976716 4976721 GATA2 JASPAR yes 112201288
chr19 4976717 4976724 POU2F1 TRANSFAC yes 70791400
chr19 4976717 4976724 POU2F1 TRANSFAC yes 112201289
chr19 4976720 4976735 HNF4A JASPAR yes 70791401
chr19 4976720 4976735 HNF4A JASPAR yes 112201290
chr19 4976735 4976741 LEF1 TRANSFAC yes 70791402
chr19 4976735 4976741 SOX10 JASPAR yes 70791403
chr19 4976735 4976741 LEF1 TRANSFAC yes 112201291
chr19 4976735 4976741 SOX10 JASPAR yes 112201292
chr19 4976750 4976762 HES5 JASPAR yes 70791404
chr19 4976750 4976762 HES5 JASPAR yes 112201293
chr19 4976766 4976778 YY1 JASPAR yes 70791405
chr19 4976766 4976778 YY1 JASPAR yes 112201294
chr19 4976769 4976775 YY1 JASPAR yes 70791406
chr19 4976769 4976775 YY1 JASPAR yes 112201295
chr19 4976779 4976783 ESR1 TRANSFAC yes 70791407
chr19 4976779 4976783 ESR1 TRANSFAC yes 112201296
chr19 4976812 4976823 FLI1 JASPAR yes 70791408
chr19 4976812 4976823 FLI1 JASPAR yes 112201297
chr19 4976813 4976823 GABPA JASPAR yes 70791409
chr19 4976813 4976823 GABPA JASPAR yes 112201298
chr19 4976813 4976826 ELF1 JASPAR yes 70791410
chr19 4976813 4976826 ELF1 JASPAR yes 112201299
chr19 4976814 4976821 SPI1 JASPAR yes 70791411
chr19 4976814 4976821 SPI1 JASPAR yes 112201300
chr19 4976814 4976822 FEV JASPAR yes 70791412
chr19 4976814 4976822 FEV JASPAR yes 112201301
chr19 4976816 4976821 ETS2 TRANSFAC yes 70791413
chr19 4976816 4976821 ETS2 TRANSFAC yes 112201302
chr19 4976817 4976838 ZNF263 JASPAR yes 70791414
chr19 4976817 4976838 ZNF263 JASPAR yes 112201303
chr19 4976819 4976825 SOX10 JASPAR yes 70791415
chr19 4976819 4976825 SOX10 JASPAR yes 112201304
chr19 4976821 4976834 SMAD2 JASPAR yes 70791416
chr19 4976821 4976834 SMAD2 JASPAR yes 112201305
chr19 4976839 4976852 SMAD2 JASPAR yes 70791417
chr19 4976839 4976852 SMAD2 JASPAR yes 112201306
chr19 4976849 4976853 YY1 TRANSFAC yes 70791418
chr19 4976849 4976853 YY1 TRANSFAC yes 112201307
chr19 4976872 4976878 NFIC JASPAR yes 70791419
chr19 4976872 4976878 NFIC JASPAR yes 112201308
SNP sites on vista28373[chr19:4976440-4976890]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 4976607 rs112220911 G A
CEBPB CTCF ESR1
5405119
chr19 4976617 rs368697327 TC T
CEBPB CTCF ESR1
5405120
chr19 4976670 rs567782256 G A
CEBPB CTCF
5405121
chr19 4976763 rs537746142 G A
CTCF
5405122
chr19 4976790 rs567953130 C T
CTCF
5405123
chr19 4976867 rs541744719 AG A no 5405124
Genes possibly regulated by vista28373[chr19:4976440-4976890]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 4890449 4902879 - ARRDC5 ENSG00000205784.2 4902879 0.92 1.0 16855 26439
chr19 4969125 5153606 + KDM4B ENSG00000127663.10 4969125 0.71 1.0 16856 92685
Expression level of Genes
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miRNAs possibly regulated by vista28373[chr19:4976440-4976890]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results