EnhancerDB
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  3. vista28383[chr19:5250100-5250567]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28383[chr19:5250100-5250567]
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Tissue distribution of vista28383
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Transcription factor that possibly regulate vista28383[chr19:5250100-5250567]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 5250096 5250116 TP53 JASPAR yes 70791818
chr19 5250096 5250116 TP53 JASPAR yes 112223253
chr19 5250097 5250115 SRF JASPAR yes 70791819
chr19 5250097 5250115 SRF JASPAR yes 112223254
chr19 5250100 5250106 MZF1 JASPAR yes 70791820
chr19 5250100 5250106 MZF1 JASPAR yes 112223255
chr19 5250104 5250116 YY1 JASPAR yes 70791821
chr19 5250104 5250116 YY1 JASPAR yes 112223256
chr19 5250121 5250136 MYBL2 JASPAR yes 70791822
chr19 5250121 5250136 MYBL2 JASPAR yes 112223257
chr19 5250137 5250143 NFIC JASPAR yes 70791823
chr19 5250137 5250143 NFIC JASPAR yes 112223258
chr19 5250139 5250143 H1TF2 TRANSFAC yes 70791824
chr19 5250139 5250143 NFE TRANSFAC yes 70791825
chr19 5250139 5250143 SRF TRANSFAC yes 70791826
chr19 5250139 5250143 H1TF2 TRANSFAC yes 112223259
chr19 5250139 5250143 NFE TRANSFAC yes 112223260
chr19 5250139 5250143 SRF TRANSFAC yes 112223261
chr19 5250139 5250149 HOXA13 JASPAR yes 70791827
chr19 5250139 5250149 HOXB13 JASPAR yes 70791828
chr19 5250139 5250149 HOXD13 JASPAR yes 70791829
chr19 5250139 5250149 HOXA13 JASPAR yes 112223262
chr19 5250139 5250149 HOXB13 JASPAR yes 112223263
chr19 5250139 5250149 HOXD13 JASPAR yes 112223264
chr19 5250148 5250152 TEAD2 TRANSFAC yes 70791830
chr19 5250148 5250152 TEAD2 TRANSFAC yes 112223265
chr19 5250160 5250171 TBX2 JASPAR yes 70791831
chr19 5250160 5250171 TBX2 JASPAR yes 112223266
chr19 5250162 5250170 TBX15 JASPAR yes 70791832
chr19 5250162 5250170 TBX1 JASPAR yes 70791833
chr19 5250162 5250170 TBX4 JASPAR yes 70791834
chr19 5250162 5250170 TBX5 JASPAR yes 70791835
chr19 5250162 5250170 TBX15 JASPAR yes 112223267
chr19 5250162 5250170 TBX1 JASPAR yes 112223268
chr19 5250162 5250170 TBX4 JASPAR yes 112223269
chr19 5250162 5250170 TBX5 JASPAR yes 112223270
chr19 5250186 5250197 NFE2L2 JASPAR yes 70791836
chr19 5250186 5250197 NFE2L2 JASPAR yes 112223271
chr19 5250187 5250208 ZNF263 JASPAR yes 70791837
chr19 5250187 5250208 ZNF263 JASPAR yes 112223272
chr19 5250203 5250207 YY1 TRANSFAC yes 70791838
chr19 5250203 5250207 YY1 TRANSFAC yes 112223273
chr19 5250210 5250216 TCF1 TRANSFAC yes 70791839
chr19 5250210 5250216 TCF1 TRANSFAC yes 112223274
chr19 5250263 5250281 NFYA JASPAR yes 70791840
chr19 5250263 5250281 NFYA JASPAR yes 112223275
chr19 5250273 5250279 NFIC JASPAR yes 70791841
chr19 5250273 5250279 NFIC JASPAR yes 112223276
chr19 5250294 5250304 MZF1 JASPAR yes 70791842
chr19 5250294 5250304 MZF1 JASPAR yes 112223277
chr19 5250297 5250303 SP1 TRANSFAC yes 70791843
chr19 5250297 5250303 SP1 TRANSFAC yes 112223278
chr19 5250308 5250326 SRF JASPAR yes 70791844
chr19 5250308 5250326 SRF JASPAR yes 112223279
chr19 5250316 5250331 TFAP2A JASPAR yes 70791845
chr19 5250316 5250331 TFAP2C JASPAR yes 70791846
chr19 5250316 5250331 TFAP2A JASPAR yes 112223280
chr19 5250316 5250331 TFAP2C JASPAR yes 112223281
chr19 5250326 5250330 LFA1 TRANSFAC yes 70791847
chr19 5250326 5250330 LFA1 TRANSFAC yes 112223282
chr19 5250346 5250352 SP1 TRANSFAC yes 70791848
chr19 5250346 5250352 SP1 TRANSFAC yes 112223283
chr19 5250347 5250352 SP1 TRANSFAC yes 70791849
chr19 5250347 5250352 SP1 TRANSFAC yes 112223284
chr19 5250348 5250353 SP1 TRANSFAC yes 70791850
chr19 5250348 5250353 SP1 TRANSFAC yes 112223285
chr19 5250370 5250389 REST JASPAR yes 70791851
chr19 5250370 5250389 REST JASPAR yes 112223286
chr19 5250386 5250400 TLX1 JASPAR yes 70791852
chr19 5250386 5250400 TLX1 JASPAR yes 112223287
chr19 5250387 5250399 ZBTB7A JASPAR yes 70791853
chr19 5250387 5250399 ZBTB7A JASPAR yes 112223288
chr19 5250387 5250404 PAX1 JASPAR yes 70791854
chr19 5250387 5250404 PAX9 JASPAR yes 70791855
chr19 5250387 5250404 PAX1 JASPAR yes 112223289
chr19 5250387 5250404 PAX9 JASPAR yes 112223290
chr19 5250388 5250400 ZBTB7B JASPAR yes 70791856
chr19 5250388 5250400 ZBTB7B JASPAR yes 112223291
chr19 5250397 5250414 ESR1 JASPAR yes 70791857
chr19 5250397 5250414 ESR1 JASPAR yes 112223292
chr19 5250450 5250455 SP1 TRANSFAC yes 70791858
chr19 5250450 5250455 SP1 TRANSFAC yes 112223293
chr19 5250450 5250459 HIC2 JASPAR yes 70791859
chr19 5250450 5250459 HIC2 JASPAR yes 112223294
chr19 5250452 5250472 ESR1 JASPAR yes 70791860
chr19 5250452 5250472 ESR1 JASPAR yes 112223295
chr19 5250453 5250457 LFA1 TRANSFAC yes 70791861
chr19 5250453 5250457 LFA1 TRANSFAC yes 112223296
chr19 5250460 5250469 HIC2 JASPAR yes 70791862
chr19 5250460 5250469 HIC2 JASPAR yes 112223297
chr19 5250476 5250491 ZBTB33 JASPAR yes 70791863
chr19 5250476 5250491 ZBTB33 JASPAR yes 112223298
chr19 5250479 5250494 ZBTB33 JASPAR yes 70791864
chr19 5250479 5250494 ZBTB33 JASPAR yes 112223299
chr19 5250486 5250498 ZBTB7B JASPAR yes 70791865
chr19 5250486 5250498 ZBTB7C JASPAR yes 70791866
chr19 5250486 5250498 ZBTB7B JASPAR yes 112223300
chr19 5250486 5250498 ZBTB7C JASPAR yes 112223301
chr19 5250490 5250499 SP1 TRANSFAC yes 70791867
chr19 5250490 5250499 SP1 TRANSFAC yes 112223302
chr19 5250491 5250497 SP1 TRANSFAC yes 70791868
chr19 5250491 5250497 SP1 TRANSFAC yes 112223303
chr19 5250491 5250501 SP1 JASPAR yes 70791869
chr19 5250491 5250501 SP1 JASPAR yes 112223304
chr19 5250492 5250499 SP1 TRANSFAC yes 70791870
chr19 5250492 5250499 SP1 TRANSFAC yes 112223305
chr19 5250493 5250498 SP1 TRANSFAC yes 70791871
chr19 5250493 5250498 SP1 TRANSFAC yes 112223306
chr19 5250493 5250499 SP1 TRANSFAC yes 70791872
chr19 5250493 5250499 SP1 TRANSFAC yes 112223307
chr19 5250493 5250500 SP1 TRANSFAC yes 70791873
chr19 5250493 5250500 SP1 TRANSFAC yes 112223308
chr19 5250498 5250508 ALX3 JASPAR yes 70791874
chr19 5250498 5250508 EN2 JASPAR yes 70791875
chr19 5250498 5250508 ESX1 JASPAR yes 70791876
chr19 5250498 5250508 GBX1 JASPAR yes 70791877
chr19 5250498 5250508 GSX1 JASPAR yes 70791878
chr19 5250498 5250508 HOXA2 JASPAR yes 70791879
chr19 5250498 5250508 LBX2 JASPAR yes 70791880
chr19 5250498 5250508 ALX3 JASPAR yes 112223309
chr19 5250498 5250508 EN2 JASPAR yes 112223310
chr19 5250498 5250508 ESX1 JASPAR yes 112223311
chr19 5250498 5250508 GBX1 JASPAR yes 112223312
chr19 5250498 5250508 GSX1 JASPAR yes 112223313
chr19 5250498 5250508 HOXA2 JASPAR yes 112223314
chr19 5250498 5250508 LBX2 JASPAR yes 112223315
chr19 5250499 5250503 H1TF2 TRANSFAC yes 70791881
chr19 5250499 5250503 NFE TRANSFAC yes 70791882
chr19 5250499 5250503 SRF TRANSFAC yes 70791883
chr19 5250499 5250503 H1TF2 TRANSFAC yes 112223316
chr19 5250499 5250503 NFE TRANSFAC yes 112223317
chr19 5250499 5250503 SRF TRANSFAC yes 112223318
chr19 5250499 5250507 BSX JASPAR yes 70791884
chr19 5250499 5250507 DLX6 JASPAR yes 70791885
chr19 5250499 5250507 MSX1 JASPAR yes 70791886
chr19 5250499 5250507 MSX2 JASPAR yes 70791887
chr19 5250499 5250507 BSX JASPAR yes 112223319
chr19 5250499 5250507 DLX6 JASPAR yes 112223320
chr19 5250499 5250507 MSX1 JASPAR yes 112223321
chr19 5250499 5250507 MSX2 JASPAR yes 112223322
chr19 5250521 5250525 H4TF2 TRANSFAC yes 70791888
chr19 5250521 5250525 H4TF2 TRANSFAC yes 112223323
chr19 5250534 5250538 TEAD2 TRANSFAC yes 70791889
chr19 5250534 5250538 TEAD2 TRANSFAC yes 112223324
chr19 5250540 5250552 GLI2 JASPAR yes 70791890
chr19 5250540 5250552 GLI2 JASPAR yes 112223325
chr19 5250546 5250565 REST JASPAR yes 70791891
chr19 5250546 5250565 REST JASPAR yes 112223326
chr19 5250557 5250561 H4TF2 TRANSFAC yes 70791892
chr19 5250557 5250561 H4TF2 TRANSFAC yes 112223327
SNP sites on vista28383[chr19:5250100-5250567]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 5250115 rs73545326 G A
SRF TP53 YY1
5407954
chr19 5250176 rs144482074 A G no 5407955
chr19 5250268 rs527577034 T C
NFYA
5407956
Genes possibly regulated by vista28383[chr19:5250100-5250567]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 5158506 5340814 - PTPRS ENSG00000105426.10 5340814 0.7 1.0 16857 9753
Expression level of Genes
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miRNAs possibly regulated by vista28383[chr19:5250100-5250567]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results