EnhancerDB
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  3. vista28384[chr19:5287522-5287818]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28384[chr19:5287522-5287818]
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Tissue distribution of vista28384
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Transcription factor that possibly regulate vista28384[chr19:5287522-5287818]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 5287444 5287789 EBF1 UCSC Txn Factor no Conserved 108374869
chr19 5287471 5287795 RUNX3 UCSC Txn Factor no Conserved 108374872
chr19 5287507 5287528 ZNF263 JASPAR yes 70791893
chr19 5287507 5287528 ZNF263 JASPAR yes 112225705
chr19 5287513 5287534 ZNF263 JASPAR yes 70791894
chr19 5287513 5287534 ZNF263 JASPAR yes 112225706
chr19 5287516 5287526 MZF1 JASPAR yes 70791895
chr19 5287516 5287526 MZF1 JASPAR yes 112225708
chr19 5287520 5287525 ETS2 TRANSFAC yes 70791896
chr19 5287520 5287525 ETS2 TRANSFAC yes 112225709
chr19 5287529 5287543 PLAG1 JASPAR yes 70791897
chr19 5287529 5287543 PLAG1 JASPAR yes 112225710
chr19 5287538 5287543 GATA2 JASPAR yes 70791898
chr19 5287538 5287543 GATA2 JASPAR yes 112225711
chr19 5287547 5287553 LEF1 TRANSFAC yes 70791899
chr19 5287547 5287553 SOX10 JASPAR yes 70791900
chr19 5287547 5287553 LEF1 TRANSFAC yes 112225712
chr19 5287547 5287553 SOX10 JASPAR yes 112225713
chr19 5287553 5287564 NFE2L2 JASPAR yes 70791901
chr19 5287553 5287564 NFE2L2 JASPAR yes 112225714
chr19 5287561 5287574 SMAD2 JASPAR yes 70791902
chr19 5287561 5287574 SMAD2 JASPAR yes 112225715
chr19 5287572 5287592 TP53 JASPAR yes 70791903
chr19 5287572 5287592 TP53 JASPAR yes 112225716
chr19 5287586 5287595 TFAP2A JASPAR yes 70791904
chr19 5287586 5287595 TFAP2A JASPAR yes 112225717
chr19 5287591 5287596 SP1 TRANSFAC yes 70791905
chr19 5287591 5287596 SP1 TRANSFAC yes 112225718
chr19 5287592 5287597 SP1 TRANSFAC yes 70791906
chr19 5287592 5287597 SP1 TRANSFAC yes 112225719
chr19 5287596 5287600 H4TF2 TRANSFAC yes 70791907
chr19 5287596 5287600 H4TF2 TRANSFAC yes 112225720
chr19 5287633 5287636 MYB TRANSFAC yes 70791908
chr19 5287633 5287636 MYB TRANSFAC yes 112225721
chr19 5287636 5287649 NFKB1 JASPAR yes 70791909
chr19 5287636 5287649 NFKB2 JASPAR yes 70791910
chr19 5287636 5287649 NFKB1 JASPAR yes 112225722
chr19 5287636 5287649 NFKB2 JASPAR yes 112225723
chr19 5287637 5287648 NFKB1 JASPAR yes 70791911
chr19 5287637 5287648 NFKB1 JASPAR yes 112225724
chr19 5287638 5287642 LFA1 TRANSFAC yes 70791912
chr19 5287638 5287642 LFA1 TRANSFAC yes 112225725
chr19 5287638 5287648 NFKB1 JASPAR yes 70791913
chr19 5287638 5287648 NFKB1 JASPAR yes 112225726
chr19 5287669 5287681 NHLH1 JASPAR yes 70791914
chr19 5287669 5287681 NHLH1 JASPAR yes 112225727
chr19 5287670 5287680 NHLH1 JASPAR yes 70791915
chr19 5287670 5287680 NHLH1 JASPAR yes 112225728
chr19 5287679 5287683 ESR1 TRANSFAC yes 70791916
chr19 5287679 5287683 ESR1 TRANSFAC yes 112225729
chr19 5287692 5287704 TFAP2A JASPAR yes 70791917
chr19 5287692 5287704 TFAP2B JASPAR yes 70791918
chr19 5287692 5287704 TFAP2C JASPAR yes 70791919
chr19 5287692 5287704 TFAP2A JASPAR yes 112225730
chr19 5287692 5287704 TFAP2B JASPAR yes 112225731
chr19 5287692 5287704 TFAP2C JASPAR yes 112225732
chr19 5287692 5287707 TFAP2A JASPAR yes 70791920
chr19 5287692 5287707 TFAP2C JASPAR yes 70791921
chr19 5287692 5287707 TFAP2A JASPAR yes 112225733
chr19 5287692 5287707 TFAP2C JASPAR yes 112225734
chr19 5287693 5287702 TFAP2A JASPAR yes 70791922
chr19 5287693 5287702 TFAP2A JASPAR yes 112225735
chr19 5287694 5287703 TFAP2A JASPAR yes 70791923
chr19 5287694 5287703 TFAP2A JASPAR yes 112225736
chr19 5287698 5287709 NFKB1 JASPAR yes 70791924
chr19 5287698 5287709 NFKB1 JASPAR yes 112225737
chr19 5287699 5287704 SP1 TRANSFAC yes 70791925
chr19 5287699 5287704 SP1 TRANSFAC yes 112225738
chr19 5287703 5287707 H4TF2 TRANSFAC yes 70791926
chr19 5287703 5287707 H4TF2 TRANSFAC yes 112225739
chr19 5287703 5287717 EBF1 JASPAR yes 70791927
chr19 5287703 5287717 EBF1 JASPAR yes 112225740
chr19 5287705 5287716 EBF1 JASPAR yes 70791928
chr19 5287705 5287716 EBF1 JASPAR yes 112225741
chr19 5287709 5287730 ZNF263 JASPAR yes 70791929
chr19 5287709 5287730 ZNF263 JASPAR yes 112225742
chr19 5287710 5287731 ZNF263 JASPAR yes 70791930
chr19 5287710 5287731 ZNF263 JASPAR yes 112225743
chr19 5287711 5287716 ETS2 TRANSFAC yes 70791931
chr19 5287711 5287716 ETS2 TRANSFAC yes 112225744
chr19 5287713 5287734 ZNF263 JASPAR yes 70791932
chr19 5287713 5287734 ZNF263 JASPAR yes 112225745
chr19 5287720 5287725 SP1 TRANSFAC yes 70791933
chr19 5287720 5287725 SP1 TRANSFAC yes 112225746
chr19 5287721 5287726 SP1 TRANSFAC yes 70791934
chr19 5287721 5287726 SP1 TRANSFAC yes 112225747
chr19 5287736 5287740 ESR1 TRANSFAC yes 70791935
chr19 5287736 5287740 ESR1 TRANSFAC yes 112225748
chr19 5287763 5287775 ZBTB7B JASPAR yes 70791936
chr19 5287763 5287775 ZBTB7B JASPAR yes 112225749
chr19 5287768 5287773 SP1 TRANSFAC yes 70791937
chr19 5287768 5287773 SP1 TRANSFAC yes 112225750
chr19 5287805 5287815 SREBF2 JASPAR yes 70791938
chr19 5287805 5287815 SREBF2 JASPAR yes 112225751
chr19 5287811 5287826 RUNX2 JASPAR yes 70791939
chr19 5287811 5287826 RUNX2 JASPAR yes 112225752
SNP sites on vista28384[chr19:5287522-5287818]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 5287582 rs187463094 C T
EBF1 RUNX3 TP53
5408235
chr19 5287628 rs73919797 G A
EBF1 RUNX3
5408236
Genes possibly regulated by vista28384[chr19:5287522-5287818]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 5158506 5340814 - PTPRS ENSG00000105426.10 5340814 0.7 1.0 16857 47004
Expression level of Genes
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miRNAs possibly regulated by vista28384[chr19:5287522-5287818]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results