EnhancerDB
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  3. vista28386[chr19:5336072-5336705]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28386[chr19:5336072-5336705]
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Tissue distribution of vista28386
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Transcription factor that possibly regulate vista28386[chr19:5336072-5336705]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 5336346 5336550 SPI1 UCSC Txn Factor no Conserved 108375032
chr19 5336072 5336092 TP53 JASPAR yes 70791972
chr19 5336078 5336082 NFE TRANSFAC yes 70791973
chr19 5336083 5336094 FOS JASPAR yes 70791974
chr19 5336083 5336094 JUND JASPAR yes 70791975
chr19 5336084 5336095 FOSL2 JASPAR yes 70791976
chr19 5336084 5336095 JUNB JASPAR yes 70791977
chr19 5336084 5336098 JUN JASPAR yes 70791978
chr19 5336085 5336091 JUN TRANSFAC yes 70791979
chr19 5336105 5336119 IRF7 JASPAR yes 70791980
chr19 5336130 5336134 H1TF2 TRANSFAC yes 70791981
chr19 5336130 5336134 NFE TRANSFAC yes 70791982
chr19 5336130 5336134 SRF TRANSFAC yes 70791983
chr19 5336130 5336144 ONECUT1 JASPAR yes 70791984
chr19 5336130 5336144 ONECUT2 JASPAR yes 70791985
chr19 5336130 5336144 ONECUT3 JASPAR yes 70791986
chr19 5336131 5336141 PAX3 JASPAR yes 70791987
chr19 5336131 5336141 PAX7 JASPAR yes 70791988
chr19 5336148 5336154 MZF1 JASPAR yes 70791989
chr19 5336148 5336168 RREB1 JASPAR yes 70791990
chr19 5336150 5336170 RREB1 JASPAR yes 70791991
chr19 5336151 5336171 RREB1 JASPAR yes 70791992
chr19 5336161 5336171 SP1 JASPAR yes 70791993
chr19 5336161 5336182 ZNF263 JASPAR yes 70791994
chr19 5336162 5336168 SP1 TRANSFAC yes 70791995
chr19 5336162 5336172 SP1 JASPAR yes 70791996
chr19 5336166 5336172 MZF1 JASPAR yes 70791997
chr19 5336203 5336209 HiNF-A TRANSFAC yes 70791998
chr19 5336211 5336225 SPIC JASPAR yes 70791999
chr19 5336214 5336235 IRF1 JASPAR yes 70792000
chr19 5336216 5336231 STAT2 JASPAR yes 70792001
chr19 5336220 5336235 FOXP1 JASPAR yes 70792002
chr19 5336220 5336241 IRF1 JASPAR yes 70792003
chr19 5336221 5336236 FOXP1 JASPAR yes 70792004
chr19 5336222 5336237 FOXP1 JASPAR yes 70792005
chr19 5336226 5336247 IRF1 JASPAR yes 70792006
chr19 5336229 5336243 SPI1 JASPAR yes 70792007
chr19 5336229 5336243 SPIC JASPAR yes 70792008
chr19 5336231 5336249 SRF JASPAR yes 70792009
chr19 5336259 5336264 ETS2 TRANSFAC yes 70792010
chr19 5336263 5336278 PRDM1 JASPAR yes 70792011
chr19 5336265 5336286 ZNF263 JASPAR yes 70792012
chr19 5336266 5336271 ETS2 TRANSFAC yes 70792013
chr19 5336271 5336292 ZNF263 JASPAR yes 70792014
chr19 5336272 5336282 ZNF740 JASPAR yes 70792015
chr19 5336273 5336283 SP1 JASPAR yes 70792016
chr19 5336273 5336283 ZNF740 JASPAR yes 70792017
chr19 5336273 5336294 ZNF263 JASPAR yes 70792018
chr19 5336274 5336284 SP1 JASPAR yes 70792019
chr19 5336274 5336284 ZNF740 JASPAR yes 70792020
chr19 5336274 5336295 ZNF263 JASPAR yes 70792021
chr19 5336275 5336285 ZNF740 JASPAR yes 70792022
chr19 5336275 5336296 ZNF263 JASPAR yes 70792023
chr19 5336278 5336292 PLAG1 JASPAR yes 70792024
chr19 5336278 5336293 NR2C2 JASPAR yes 70792025
chr19 5336279 5336286 SP1 TRANSFAC yes 70792026
chr19 5336279 5336289 SP1 JASPAR yes 70792027
chr19 5336280 5336288 SP1 TRANSFAC yes 70792028
chr19 5336281 5336286 SP1 TRANSFAC yes 70792029
chr19 5336281 5336292 E2F4 JASPAR yes 70792030
chr19 5336282 5336287 SP1 TRANSFAC yes 70792031
chr19 5336282 5336288 SP1 TRANSFAC yes 70792032
chr19 5336282 5336292 SP1 JASPAR yes 70792033
chr19 5336283 5336293 ZNF740 JASPAR yes 70792034
chr19 5336291 5336306 RUNX2 JASPAR yes 70792035
chr19 5336292 5336301 RUNX2 JASPAR yes 70792036
chr19 5336292 5336302 RUNX3 JASPAR yes 70792037
chr19 5336298 5336314 SOX8 JASPAR yes 70792038
chr19 5336319 5336339 PPARG JASPAR yes 70792039
chr19 5336321 5336339 ESR1 JASPAR yes 70792040
chr19 5336321 5336339 ESR2 JASPAR yes 70792041
chr19 5336322 5336342 ESR1 JASPAR yes 70792042
chr19 5336333 5336345 PKNOX2 JASPAR yes 70792043
chr19 5336334 5336344 ID4 JASPAR yes 70792044
chr19 5336337 5336345 TBX15 JASPAR yes 70792045
chr19 5336337 5336345 TBX1 JASPAR yes 70792046
chr19 5336337 5336345 TBX4 JASPAR yes 70792047
chr19 5336337 5336345 TBX5 JASPAR yes 70792048
chr19 5336340 5336355 SCRT1 JASPAR yes 70792049
chr19 5336341 5336348 USF2 TRANSFAC yes 70792050
chr19 5336341 5336351 SREBF2 JASPAR yes 70792051
chr19 5336343 5336348 USF2 TRANSFAC yes 70792052
chr19 5336344 5336350 PTF TRANSFAC yes 70792053
chr19 5336358 5336362 YY1 TRANSFAC yes 70792054
chr19 5336399 5336410 E2F6 JASPAR yes 70792055
chr19 5336424 5336445 IRF1 JASPAR yes 70792056
chr19 5336426 5336437 ELK4 JASPAR yes 70792057
chr19 5336426 5336437 FLI1 JASPAR yes 70792058
chr19 5336427 5336437 ETV6 JASPAR yes 70792059
chr19 5336427 5336437 GABPA JASPAR yes 70792060
chr19 5336427 5336440 ELF1 JASPAR yes 70792061
chr19 5336428 5336435 SPI1 JASPAR yes 70792062
chr19 5336428 5336436 EHF JASPAR yes 70792063
chr19 5336429 5336450 ZNF263 JASPAR yes 70792064
chr19 5336430 5336437 SPIB JASPAR yes 70792065
chr19 5336435 5336456 ZNF263 JASPAR yes 70792066
chr19 5336446 5336456 SP1 JASPAR yes 70792067
chr19 5336447 5336461 SPI1 JASPAR yes 70792068
chr19 5336448 5336456 EHF JASPAR yes 70792069
chr19 5336462 5336481 CTCF JASPAR yes 70792070
chr19 5336465 5336476 USF1 JASPAR yes 70792071
chr19 5336465 5336476 USF2 JASPAR yes 70792072
chr19 5336466 5336473 USF2 TRANSFAC yes 70792073
chr19 5336468 5336473 USF2 TRANSFAC yes 70792074
chr19 5336473 5336487 GATA2 JASPAR yes 70792075
chr19 5336475 5336481 GATA1 TRANSFAC yes 70792076
chr19 5336475 5336483 GATA5 JASPAR yes 70792077
chr19 5336490 5336494 YY1 TRANSFAC yes 70792078
chr19 5336514 5336535 ZNF263 JASPAR yes 70792079
chr19 5336528 5336534 NFE2 TRANSFAC yes 70792080
chr19 5336555 5336561 ETS1 JASPAR yes 70792081
chr19 5336576 5336586 TBX21 JASPAR yes 70792082
chr19 5336576 5336587 TBX20 JASPAR yes 70792083
chr19 5336576 5336587 TBX2 JASPAR yes 70792084
chr19 5336576 5336589 EOMES JASPAR yes 70792085
chr19 5336577 5336585 MGA JASPAR yes 70792086
chr19 5336577 5336585 TBX15 JASPAR yes 70792087
chr19 5336577 5336585 TBX1 JASPAR yes 70792088
chr19 5336577 5336585 TBX4 JASPAR yes 70792089
chr19 5336577 5336585 TBX5 JASPAR yes 70792090
chr19 5336577 5336587 TBR1 JASPAR yes 70792091
chr19 5336633 5336638 GATA2 JASPAR yes 70792092
chr19 5336634 5336644 HEY2 JASPAR yes 70792093
chr19 5336646 5336650 H4TF2 TRANSFAC yes 70792094
chr19 5336663 5336678 RUNX2 JASPAR yes 70792095
chr19 5336666 5336680 IRF7 JASPAR yes 70792096
chr19 5336666 5336680 ONECUT3 JASPAR yes 70792097
chr19 5336666 5336681 IRF9 JASPAR yes 70792098
chr19 5336670 5336690 RREB1 JASPAR yes 70792099
chr19 5336670 5336691 IRF1 JASPAR yes 70792100
chr19 5336675 5336695 RREB1 JASPAR yes 70792101
chr19 5336677 5336683 TCF4 TRANSFAC yes 70792102
chr19 5336677 5336692 FOXP1 JASPAR yes 70792103
chr19 5336680 5336692 IRF1 JASPAR yes 70792104
chr19 5336682 5336688 TCF4 TRANSFAC yes 70792105
SNP sites on vista28386[chr19:5336072-5336705]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 5336109 rs74747934 T A
IRF7
5408667
chr19 5336220 rs546944584 G T
FOXP1 IRF1 SPIC STAT2
5408668
chr19 5336246 rs530916593 TGA T
IRF1 SRF
5408669
chr19 5336269 rs28403307 G C
ETS2 PRDM1 ZNF263
5408670
chr19 5336274 rs113603019 AG A
PRDM1 SP1 ZNF263 ZNF740
5408671
chr19 5336293 rs7245391 A G
NR2C2 RUNX2 RUNX3 ZNF263 ZNF740
5408672
chr19 5336333 rs73922010 G C
ESR1 ESR2 PKNOX2 PPARG
5408673
chr19 5336389 rs1015675 C T
SPI1
5408674
chr19 5336408 rs535965933 C T
E2F6 SPI1
5408675
chr19 5336502 rs4807722 C T
SPI1
5408676
chr19 5336504 rs183170873 A G
SPI1
5408677
chr19 5336602 rs373040026 A T no 5408678
chr19 5336674 rs117291159 G A,T
IRF1 IRF7 IRF9 ONECUT3 RREB1 RUNX2
5408679
Genes possibly regulated by vista28386[chr19:5336072-5336705]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 5158506 5340814 - PTPRS ENSG00000105426.10 5340814 0.7 1.0 16857 95891
Expression level of Genes
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miRNAs possibly regulated by vista28386[chr19:5336072-5336705]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results