EnhancerDB
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  3. vista28389[chr19:5339517-5339797]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28389[chr19:5339517-5339797]
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Tissue distribution of vista28389
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Transcription factor that possibly regulate vista28389[chr19:5339517-5339797]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 5339517 5339527 NFKB1 JASPAR yes 70792215
chr19 5339517 5339527 REL JASPAR yes 70792216
chr19 5339517 5339528 NFKB1 JASPAR yes 70792217
chr19 5339517 5339530 NFKB1 JASPAR yes 70792218
chr19 5339517 5339530 NFKB2 JASPAR yes 70792219
chr19 5339518 5339528 NFKB1 JASPAR yes 70792220
chr19 5339518 5339528 RELA JASPAR yes 70792221
chr19 5339518 5339529 NFKB1 JASPAR yes 70792222
chr19 5339520 5339534 SPI1 JASPAR yes 70792223
chr19 5339521 5339539 SRF JASPAR yes 70792224
chr19 5339523 5339539 SRF JASPAR yes 70792225
chr19 5339523 5339541 SRF JASPAR yes 70792226
chr19 5339524 5339530 MZF1 JASPAR yes 70792227
chr19 5339527 5339531 H1TF2 TRANSFAC yes 70792228
chr19 5339527 5339531 NFE TRANSFAC yes 70792229
chr19 5339527 5339531 SRF TRANSFAC yes 70792230
chr19 5339534 5339539 ETS2 TRANSFAC yes 70792231
chr19 5339546 5339560 E2F7 JASPAR yes 70792232
chr19 5339547 5339559 E2F8 JASPAR yes 70792233
chr19 5339550 5339555 SP1 TRANSFAC yes 70792234
chr19 5339552 5339572 TP53 JASPAR yes 70792235
chr19 5339569 5339581 INSM1 JASPAR yes 70792236
chr19 5339571 5339581 MZF1 JASPAR yes 70792237
chr19 5339574 5339595 ZNF263 JASPAR yes 70792238
chr19 5339575 5339586 NFKB1 JASPAR yes 70792239
chr19 5339580 5339584 H4TF2 TRANSFAC yes 70792240
chr19 5339595 5339610 MEF2A JASPAR yes 70792241
chr19 5339598 5339608 MEF2A JASPAR yes 70792242
chr19 5339613 5339624 STAT1 JASPAR yes 70792243
chr19 5339613 5339624 STAT3 JASPAR yes 70792244
chr19 5339616 5339626 HOXA13 JASPAR yes 70792245
chr19 5339616 5339626 HOXB13 JASPAR yes 70792246
chr19 5339628 5339639 ESRRA JASPAR yes 70792247
chr19 5339667 5339687 ESR1 JASPAR yes 70792248
chr19 5339670 5339688 ESR2 JASPAR yes 70792249
chr19 5339671 5339688 ESR1 JASPAR yes 70792250
chr19 5339672 5339692 ESR1 JASPAR yes 70792251
chr19 5339673 5339677 LFA1 TRANSFAC yes 70792252
chr19 5339681 5339684 MYB TRANSFAC yes 70792253
chr19 5339687 5339698 NFKB1 JASPAR yes 70792254
chr19 5339687 5339700 NFKB1 JASPAR yes 70792255
chr19 5339687 5339700 NFKB2 JASPAR yes 70792256
chr19 5339688 5339699 NFKB1 JASPAR yes 70792257
chr19 5339689 5339699 NFKB1 JASPAR yes 70792258
chr19 5339689 5339700 NFKB1 JASPAR yes 70792259
chr19 5339692 5339707 TFAP2A JASPAR yes 70792260
chr19 5339692 5339707 TFAP2C JASPAR yes 70792261
chr19 5339694 5339707 TFAP2A JASPAR yes 70792262
chr19 5339694 5339707 TFAP2B JASPAR yes 70792263
chr19 5339694 5339707 TFAP2C JASPAR yes 70792264
chr19 5339694 5339709 TFAP2A JASPAR yes 70792265
chr19 5339694 5339709 TFAP2C JASPAR yes 70792266
chr19 5339695 5339707 TFAP2A JASPAR yes 70792267
chr19 5339695 5339707 TFAP2B JASPAR yes 70792268
chr19 5339695 5339707 TFAP2C JASPAR yes 70792269
chr19 5339702 5339706 LFA1 TRANSFAC yes 70792270
chr19 5339706 5339711 SP1 TRANSFAC yes 70792271
chr19 5339716 5339730 RXRB JASPAR yes 70792272
chr19 5339716 5339730 RXRG JASPAR yes 70792273
chr19 5339716 5339731 NR2C2 JASPAR yes 70792274
chr19 5339723 5339726 MYB TRANSFAC yes 70792275
chr19 5339739 5339748 SP1 TRANSFAC yes 70792276
chr19 5339740 5339746 SP1 TRANSFAC yes 70792277
chr19 5339740 5339750 SP1 JASPAR yes 70792278
chr19 5339741 5339748 SP1 TRANSFAC yes 70792279
chr19 5339742 5339747 SP1 TRANSFAC yes 70792280
chr19 5339742 5339748 SP1 TRANSFAC yes 70792281
chr19 5339742 5339749 SP1 TRANSFAC yes 70792282
chr19 5339749 5339764 JUND JASPAR yes 70792283
chr19 5339750 5339763 JUN JASPAR yes 70792284
chr19 5339751 5339764 ATF4 JASPAR yes 70792285
chr19 5339751 5339765 ATF7 JASPAR yes 70792286
chr19 5339751 5339765 BATF3 JASPAR yes 70792287
chr19 5339752 5339764 HLF JASPAR yes 70792288
chr19 5339752 5339764 JDP2 JASPAR yes 70792289
chr19 5339752 5339767 JUND JASPAR yes 70792290
chr19 5339753 5339766 JUN JASPAR yes 70792291
chr19 5339754 5339759 ATF1 TRANSFAC yes 70792292
chr19 5339754 5339762 CREB1 JASPAR yes 70792293
chr19 5339756 5339761 ATF1 TRANSFAC yes 70792294
chr19 5339763 5339784 ZNF263 JASPAR yes 70792295
chr19 5339764 5339785 ZNF263 JASPAR yes 70792296
chr19 5339765 5339771 SP1 TRANSFAC yes 70792297
chr19 5339765 5339775 SP1 JASPAR yes 70792298
chr19 5339766 5339776 SP1 JASPAR yes 70792299
chr19 5339770 5339784 PLAG1 JASPAR yes 70792300
chr19 5339771 5339785 PLAG1 JASPAR yes 70792301
chr19 5339778 5339790 TFAP2A JASPAR yes 70792302
chr19 5339778 5339791 TFAP2A JASPAR yes 70792303
chr19 5339778 5339791 TFAP2B JASPAR yes 70792304
chr19 5339778 5339791 TFAP2C JASPAR yes 70792305
chr19 5339778 5339792 EBF1 JASPAR yes 70792306
chr19 5339779 5339788 TFAP2A JASPAR yes 70792307
chr19 5339779 5339792 TFAP2A JASPAR yes 70792308
chr19 5339779 5339792 TFAP2B JASPAR yes 70792309
chr19 5339779 5339792 TFAP2C JASPAR yes 70792310
chr19 5339780 5339792 TFAP2A JASPAR yes 70792311
chr19 5339782 5339791 TFAP2A JASPAR yes 70792312
SNP sites on vista28389[chr19:5339517-5339797]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 5339539 rs552414910 AG A
ETS2 SRF
5408717
chr19 5339541 rs35736786 G C
SRF
5408718
chr19 5339678 rs190160373 A G
ESR1 ESR2
5408719
chr19 5339770 rs560460369 T C
PLAG1 SP1 ZNF263
5408720
Genes possibly regulated by vista28389[chr19:5339517-5339797]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 5158506 5340814 - PTPRS ENSG00000105426.10 5340814 0.7 1.0 16857 98983
Expression level of Genes
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miRNAs possibly regulated by vista28389[chr19:5339517-5339797]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results