EnhancerDB
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  3. vista2839[chr1:109572587-109572654]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2839[chr1:109572587-109572654]
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Tissue distribution of vista2839
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Transcription factor that possibly regulate vista2839[chr1:109572587-109572654]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 109572615 109572618 MYB TRANSFAC yes 118346384
chr1 109572616 109572628 FOXI1 JASPAR yes 118346385
chr1 109572623 109572627 TEAD2 TRANSFAC yes 118346386
chr1 109572634 109572647 DUXA JASPAR yes 118346387
chr1 109572635 109572646 PHOX2A JASPAR yes 118346388
chr1 109572635 109572646 PROP1 JASPAR yes 118346389
chr1 109572638 109572648 ALX3 JASPAR yes 118346390
chr1 109572638 109572648 GSX2 JASPAR yes 118346391
chr1 109572638 109572648 MIXL1 JASPAR yes 118346392
chr1 109572638 109572648 MNX1 JASPAR yes 118346393
chr1 109572639 109572647 ISX JASPAR yes 118346394
chr1 109572639 109572647 LMX1A JASPAR yes 118346395
chr1 109572639 109572647 LMX1B JASPAR yes 118346396
chr1 109572639 109572647 NKX6-1 JASPAR yes 118346397
chr1 109572639 109572647 NKX6-2 JASPAR yes 118346398
chr1 109572639 109572647 PRRX1 JASPAR yes 118346399
chr1 109572639 109572647 RAX2 JASPAR yes 118346400
chr1 109572639 109572647 SHOX JASPAR yes 118346401
chr1 109572639 109572647 UNCX JASPAR yes 118346402
chr1 109572639 109572647 VAX1 JASPAR yes 118346403
SNP sites on vista2839[chr1:109572587-109572654]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista2839[chr1:109572587-109572654]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 109358520 109506106 - AKNAD1 ENSG00000162641.14 109506106 0.95 0.99 963 33519
chr1 109472130 109506111 - CLCC1 ENSG00000121940.11 109506111 0.55 0.99 965 33524
chr1 109512836 109584850 - WDR47 ENSG00000085433.11 109584850 0.73 0.99 966 87804
chr1 109605108 109618624 - TAF13 ENSG00000197780.5 109618624 0.69 0.99 967 54030
chr1 109632425 109639556 + TMEM167B ENSG00000215717.5 109632425 0.62 0.99 968 40229
chr1 109648573 109656479 - C1orf194 ENSG00000179902.8 109656479 0.92 1.0 969 16175
chr1 109656301 109749401 + KIAA1324 ENSG00000116299.12 109656301 0.93 0.95 970 16353
Expression level of Genes
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miRNAs possibly regulated by vista2839[chr1:109572587-109572654]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results