EnhancerDB
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  3. vista28393[chr19:5505612-5505767]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28393[chr19:5505612-5505767]
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Tissue distribution of vista28393
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Transcription factor that possibly regulate vista28393[chr19:5505612-5505767]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 5505620 5505624 YY1 TRANSFAC yes 70792459
chr19 5505623 5505627 TEAD2 TRANSFAC yes 70792460
chr19 5505654 5505658 YY1 TRANSFAC yes 70792461
chr19 5505669 5505673 YY1 TRANSFAC yes 70792462
chr19 5505682 5505693 DUX4 JASPAR yes 70792463
chr19 5505687 5505697 HOXA13 JASPAR yes 70792464
chr19 5505687 5505697 HOXB13 JASPAR yes 70792465
chr19 5505687 5505697 HOXD13 JASPAR yes 70792466
chr19 5505692 5505702 CEBPB JASPAR yes 70792467
chr19 5505692 5505702 CEBPE JASPAR yes 70792468
chr19 5505692 5505702 CEBPG JASPAR yes 70792469
chr19 5505696 5505706 EVX1 JASPAR yes 70792470
chr19 5505696 5505706 EVX2 JASPAR yes 70792471
chr19 5505696 5505706 HOXA2 JASPAR yes 70792472
chr19 5505696 5505706 MEOX1 JASPAR yes 70792473
chr19 5505696 5505711 JUND JASPAR yes 70792474
chr19 5505727 5505733 LEF1 TRANSFAC yes 70792475
chr19 5505727 5505733 SOX10 JASPAR yes 70792476
chr19 5505727 5505742 FOXP1 JASPAR yes 70792477
chr19 5505737 5505746 THAP1 JASPAR yes 70792478
chr19 5505738 5505744 YY1 JASPAR yes 70792479
chr19 5505761 5505765 NFE TRANSFAC yes 70792480
SNP sites on vista28393[chr19:5505612-5505767]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 5505657 rs72981215 T C
YY1
5409526
chr19 5505679 rs187382437 C T no 5409527
Genes possibly regulated by vista28393[chr19:5505612-5505767]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 5455426 5456867 + ZNRF4 ENSG00000105428.4 5455426 1.0 0.0 16858 49814
Expression level of Genes
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miRNAs possibly regulated by vista28393[chr19:5505612-5505767]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results