EnhancerDB
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  3. vista28394[chr19:5517224-5517513]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28394[chr19:5517224-5517513]
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Tissue distribution of vista28394
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Transcription factor that possibly regulate vista28394[chr19:5517224-5517513]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 5517221 5517233 FOXI1 JASPAR yes 70792481
chr19 5517221 5517233 FOXI1 JASPAR yes 112234037
chr19 5517249 5517262 SMAD2 JASPAR yes 70792482
chr19 5517249 5517262 SMAD2 JASPAR yes 112234038
chr19 5517255 5517265 FIGLA JASPAR yes 70792483
chr19 5517255 5517265 ID4 JASPAR yes 70792484
chr19 5517255 5517265 TCF3 JASPAR yes 70792485
chr19 5517255 5517265 TCF4 JASPAR yes 70792486
chr19 5517255 5517265 FIGLA JASPAR yes 112234039
chr19 5517255 5517265 ID4 JASPAR yes 112234040
chr19 5517255 5517265 TCF3 JASPAR yes 112234041
chr19 5517255 5517265 TCF4 JASPAR yes 112234042
chr19 5517257 5517262 USF2 TRANSFAC yes 70792487
chr19 5517257 5517262 USF2 TRANSFAC yes 112234043
chr19 5517304 5517322 RARA JASPAR yes 70792488
chr19 5517304 5517322 RARA JASPAR yes 112234044
chr19 5517353 5517368 FOXP1 JASPAR yes 70792489
chr19 5517353 5517368 FOXP1 JASPAR yes 112234045
chr19 5517354 5517369 FOXP1 JASPAR yes 70792490
chr19 5517354 5517369 FOXP1 JASPAR yes 112234046
chr19 5517355 5517370 FOXP1 JASPAR yes 70792491
chr19 5517355 5517370 FOXP1 JASPAR yes 112234047
chr19 5517355 5517376 IRF1 JASPAR yes 70792492
chr19 5517355 5517376 IRF1 JASPAR yes 112234048
chr19 5517356 5517371 FOXP1 JASPAR yes 70792493
chr19 5517356 5517371 FOXP1 JASPAR yes 112234049
chr19 5517357 5517372 FOXP1 JASPAR yes 70792494
chr19 5517357 5517372 FOXP1 JASPAR yes 112234050
chr19 5517357 5517378 IRF1 JASPAR yes 70792495
chr19 5517357 5517378 IRF1 JASPAR yes 112234051
chr19 5517358 5517373 FOXP1 JASPAR yes 70792496
chr19 5517358 5517373 FOXP1 JASPAR yes 112234052
chr19 5517359 5517374 FOXP1 JASPAR yes 70792497
chr19 5517359 5517374 FOXP1 JASPAR yes 112234053
chr19 5517359 5517380 IRF1 JASPAR yes 70792498
chr19 5517359 5517380 IRF1 JASPAR yes 112234054
chr19 5517360 5517375 FOXP1 JASPAR yes 70792499
chr19 5517360 5517375 FOXP1 JASPAR yes 112234055
chr19 5517360 5517381 IRF1 JASPAR yes 70792500
chr19 5517360 5517381 IRF1 JASPAR yes 112234056
chr19 5517361 5517376 FOXP1 JASPAR yes 70792501
chr19 5517361 5517376 FOXP1 JASPAR yes 112234057
chr19 5517402 5517411 ZEB1 JASPAR yes 70792502
chr19 5517402 5517411 ZEB1 JASPAR yes 112234058
chr19 5517403 5517413 ID4 JASPAR yes 70792503
chr19 5517403 5517413 TCF3 JASPAR yes 70792504
chr19 5517403 5517413 TCF4 JASPAR yes 70792505
chr19 5517403 5517413 ID4 JASPAR yes 112234059
chr19 5517403 5517413 TCF3 JASPAR yes 112234060
chr19 5517403 5517413 TCF4 JASPAR yes 112234061
chr19 5517404 5517413 SNAI2 JASPAR yes 70792506
chr19 5517404 5517413 SNAI2 JASPAR yes 112234062
chr19 5517405 5517410 USF2 TRANSFAC yes 70792507
chr19 5517405 5517410 USF2 TRANSFAC yes 112234063
chr19 5517427 5517448 ZNF263 JASPAR yes 70792508
chr19 5517427 5517448 ZNF263 JASPAR yes 112234064
chr19 5517461 5517478 RXRA JASPAR yes 70792509
chr19 5517461 5517478 RXRA JASPAR yes 112234065
chr19 5517483 5517494 CEBPB JASPAR yes 70792510
chr19 5517483 5517494 CEBPB JASPAR yes 112234066
chr19 5517484 5517495 CEBPA JASPAR yes 70792511
chr19 5517484 5517495 CEBPA JASPAR yes 112234067
chr19 5517505 5517524 PAX5 JASPAR yes 70792512
chr19 5517505 5517524 PAX5 JASPAR yes 112234068
chr19 5517512 5517518 SOX10 JASPAR yes 70792513
chr19 5517512 5517518 SOX10 JASPAR yes 112234069
SNP sites on vista28394[chr19:5517224-5517513]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 5517265 rs149228911 A C
FIGLA ID4 TCF3 TCF4
5409545
chr19 5517308 rs552768445 G A
RARA
5409546
chr19 5517340 rs569370715 G T no 5409547
chr19 5517405 rs380332 G A
ID4 SNAI2 TCF3 TCF4 USF2 ZEB1
5409548
chr19 5517512 rs113021253 G A
PAX5 SOX10
5409549
Genes possibly regulated by vista28394[chr19:5517224-5517513]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 5455426 5456867 + ZNRF4 ENSG00000105428.4 5455426 1.0 0.0 16858 38202
Expression level of Genes
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miRNAs possibly regulated by vista28394[chr19:5517224-5517513]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results