EnhancerDB
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  3. vista28399[chr19:5804044-5804378]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28399[chr19:5804044-5804378]
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Tissue distribution of vista28399
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Transcription factor that possibly regulate vista28399[chr19:5804044-5804378]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 5803559 5804202 E2F6 UCSC Txn Factor no Conserved 108375694
chr19 5803572 5804322 MAX UCSC Txn Factor no Conserved 108375700
chr19 5803691 5804462 POLR2A UCSC Txn Factor no Conserved 108375731
chr19 5803828 5804387 ZNF263 UCSC Txn Factor no Conserved 108375766
chr19 5803909 5804391 MAZ UCSC Txn Factor no Conserved 108375805
chr19 5803943 5804219 EGR1 UCSC Txn Factor no Conserved 108375820
chr19 5803979 5804413 CTCF UCSC Txn Factor no Conserved 108375842
chr19 5804028 5804322 RAD21 UCSC Txn Factor no Conserved 108375858
chr19 5804053 5804059 SP1 TRANSFAC yes 70792658
chr19 5804053 5804059 SP1 TRANSFAC yes 112242657
chr19 5804054 5804059 SP1 TRANSFAC yes 70792659
chr19 5804054 5804059 SP1 TRANSFAC yes 112242658
chr19 5804054 5804065 E2F4 JASPAR yes 70792660
chr19 5804054 5804065 E2F6 JASPAR yes 70792661
chr19 5804054 5804065 E2F4 JASPAR yes 112242659
chr19 5804054 5804065 E2F6 JASPAR yes 112242660
chr19 5804055 5804060 SP1 TRANSFAC yes 70792662
chr19 5804055 5804060 SP1 TRANSFAC yes 112242661
chr19 5804069 5804073 ESR1 TRANSFAC yes 70792663
chr19 5804069 5804073 ESR1 TRANSFAC yes 112242662
chr19 5804073 5804086 TFAP2A JASPAR yes 70792664
chr19 5804073 5804086 TFAP2B JASPAR yes 70792665
chr19 5804073 5804086 TFAP2C JASPAR yes 70792666
chr19 5804073 5804086 TFAP2A JASPAR yes 112242663
chr19 5804073 5804086 TFAP2B JASPAR yes 112242664
chr19 5804073 5804086 TFAP2C JASPAR yes 112242665
chr19 5804073 5804088 ZIC3 JASPAR yes 70792667
chr19 5804073 5804088 ZIC4 JASPAR yes 70792668
chr19 5804073 5804088 ZIC3 JASPAR yes 112242666
chr19 5804073 5804088 ZIC4 JASPAR yes 112242667
chr19 5804079 5804089 SP1 JASPAR yes 70792669
chr19 5804079 5804089 SP1 JASPAR yes 112242668
chr19 5804080 5804088 SP1 TRANSFAC yes 70792670
chr19 5804080 5804088 SP1 TRANSFAC yes 112242669
chr19 5804081 5804086 SP1 TRANSFAC yes 70792671
chr19 5804081 5804086 SP1 TRANSFAC yes 112242670
chr19 5804082 5804087 SP1 TRANSFAC yes 70792672
chr19 5804082 5804087 SP1 TRANSFAC yes 112242671
chr19 5804082 5804088 SP1 TRANSFAC yes 70792673
chr19 5804082 5804088 SP1 TRANSFAC yes 112242672
chr19 5804083 5804091 SP1 TRANSFAC yes 70792674
chr19 5804083 5804091 WT1 TRANSFAC yes 70792675
chr19 5804083 5804091 SP1 TRANSFAC yes 112242673
chr19 5804083 5804091 WT1 TRANSFAC yes 112242674
chr19 5804085 5804092 SP1 TRANSFAC yes 70792676
chr19 5804085 5804092 SP1 TRANSFAC yes 112242675
chr19 5804085 5804095 SP1 JASPAR yes 70792677
chr19 5804085 5804095 SP1 JASPAR yes 112242676
chr19 5804086 5804094 SP1 TRANSFAC yes 70792678
chr19 5804086 5804094 SP1 TRANSFAC yes 112242677
chr19 5804086 5804095 SP1 TRANSFAC yes 70792679
chr19 5804086 5804095 SP1 TRANSFAC yes 112242678
chr19 5804087 5804092 SP1 TRANSFAC yes 70792680
chr19 5804087 5804092 SP1 TRANSFAC yes 112242679
chr19 5804088 5804093 SP1 TRANSFAC yes 70792681
chr19 5804088 5804093 SP1 TRANSFAC yes 112242680
chr19 5804088 5804094 SP1 TRANSFAC yes 70792682
chr19 5804088 5804094 SP1 TRANSFAC yes 112242681
chr19 5804091 5804096 SP1 TRANSFAC yes 70792683
chr19 5804091 5804096 SP1 TRANSFAC yes 112242682
chr19 5804119 5804125 YY1 JASPAR yes 70792684
chr19 5804119 5804125 YY1 JASPAR yes 112242683
chr19 5804150 5804169 CTCF JASPAR yes 70792685
chr19 5804150 5804169 CTCF JASPAR yes 112242684
chr19 5804178 5804192 PLAG1 JASPAR yes 70792686
chr19 5804178 5804192 PLAG1 JASPAR yes 112242685
chr19 5804200 5804205 SP1 TRANSFAC yes 70792687
chr19 5804200 5804205 SP1 TRANSFAC yes 112242686
chr19 5804229 5804244 RFX5 JASPAR yes 70792688
chr19 5804229 5804244 RFX5 JASPAR yes 112242687
chr19 5804233 5804252 CTCF JASPAR yes 70792689
chr19 5804233 5804252 CTCF JASPAR yes 112242688
chr19 5804245 5804256 NRF1 JASPAR yes 70792690
chr19 5804245 5804256 NRF1 JASPAR yes 112242689
chr19 5804250 5804261 E2F4 JASPAR yes 70792691
chr19 5804250 5804261 E2F4 JASPAR yes 112242690
chr19 5804251 5804256 SP1 TRANSFAC yes 70792692
chr19 5804251 5804256 SP1 TRANSFAC yes 112242691
chr19 5804266 5804279 NFKB1 JASPAR yes 70792693
chr19 5804266 5804279 NFKB1 JASPAR yes 112242692
chr19 5804267 5804278 NFKB1 JASPAR yes 70792694
chr19 5804267 5804278 NFKB1 JASPAR yes 112242693
chr19 5804268 5804278 NFKB1 JASPAR yes 70792695
chr19 5804268 5804278 NFKB1 JASPAR yes 112242694
chr19 5804274 5804287 TFAP2B JASPAR yes 70792696
chr19 5804274 5804287 TFAP2B JASPAR yes 112242695
chr19 5804309 5804321 PBX1 JASPAR yes 70792697
chr19 5804309 5804321 PBX1 JASPAR yes 112242696
chr19 5804313 5804327 GLIS3 JASPAR yes 70792698
chr19 5804313 5804327 GLIS3 JASPAR yes 112242697
chr19 5804338 5804352 ATF7 JASPAR yes 70792699
chr19 5804338 5804352 ATF7 JASPAR yes 112242698
chr19 5804339 5804351 JDP2 JASPAR yes 70792700
chr19 5804339 5804351 JDP2 JASPAR yes 112242699
chr19 5804340 5804353 JUN JASPAR yes 70792701
chr19 5804340 5804353 JUN JASPAR yes 112242700
chr19 5804359 5804364 ETS2 TRANSFAC yes 70792702
chr19 5804359 5804364 ETS2 TRANSFAC yes 112242701
chr19 5804377 5804392 STAT1 JASPAR yes 70792703
chr19 5804377 5804392 STAT1 JASPAR yes 112242702
SNP sites on vista28399[chr19:5804044-5804378]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 5804325 rs10401730 G A
CTCF GLIS3 MAZ POLR2A ZNF263
5410880
Genes possibly regulated by vista28399[chr19:5804044-5804378]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 5691845 5720583 - LONP1 ENSG00000196365.7 5720583 0.78 1.0 16864 16539
chr19 5720688 5778745 + CATSPERD ENSG00000174898.11 5720688 0.98 1.0 16865 16644
chr19 5782971 5784776 - PRR22 ENSG00000212123.3 5784776 0.73 1.0 16866 80732
chr19 5784016 5785630 - CTB-54O9.9 ENSG00000267157.1 5785630 0.9 0.87 16867 81586
chr19 5784843 5791249 - DUS3L ENSG00000141994.11 5791249 0.54 1.0 16868 87205
chr19 5823813 5828335 + NRTN ENSG00000171119.2 5823813 0.82 1.0 16869 80565
chr19 5830621 5839742 - FUT6 ENSG00000156413.9 5839742 0.97 0.98 16870 64636
chr19 5842899 5851485 - FUT3 ENSG00000171124.8 5851485 0.94 1.0 16871 52893
chr19 5865837 5903798 - FUT5 ENSG00000130383.6 5903798 0.91 0.99 16872 580
chr19 5866182 5903798 - AC024592.12 ENSG00000267740.1 5903798 0.85 0.85 16873 580
chr19 5891287 5904017 - NDUFA11 ENSG00000174886.8 5904017 0.83 0.96 16874 361
Expression level of Genes
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miRNAs possibly regulated by vista28399[chr19:5804044-5804378]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results