EnhancerDB
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  3. vista2840[chr1:109677264-109677321]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2840[chr1:109677264-109677321]
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Tissue distribution of vista2840
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Transcription factor that possibly regulate vista2840[chr1:109677264-109677321]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 109676895 109677545 POLR2A UCSC Txn Factor no Conserved 107818998
chr1 109676962 109677481 GATA1 UCSC Txn Factor no Conserved 107819001
chr1 109676981 109677531 GATA2 UCSC Txn Factor no Conserved 107819002
chr1 109677084 109677382 TEAD4 UCSC Txn Factor no Conserved 107819015
chr1 109677086 109677385 TAL1 UCSC Txn Factor no Conserved 107819017
chr1 109677089 109677399 BHLHE40 UCSC Txn Factor no Conserved 107819020
chr1 109677098 109677414 EP300 UCSC Txn Factor no Conserved 107819022
chr1 109677110 109677361 PML UCSC Txn Factor no Conserved 107819024
chr1 109677113 109677368 GABPA UCSC Txn Factor no Conserved 107819026
chr1 109677159 109677291 NR2F2 UCSC Txn Factor no Conserved 107819033
chr1 109677169 109677275 STAT5A UCSC Txn Factor no Conserved 107819035
chr1 109677288 109677296 GATA3 JASPAR yes 31409982
chr1 109677288 109677296 GATA3 JASPAR yes 118346404
chr1 109677308 109677326 IRF2 JASPAR yes 31409983
chr1 109677308 109677326 IRF2 JASPAR yes 118346405
chr1 109677309 109677330 IRF1 JASPAR yes 31409984
chr1 109677309 109677330 IRF1 JASPAR yes 118346406
chr1 109677313 109677327 IRF7 JASPAR yes 31409985
chr1 109677313 109677327 IRF8 JASPAR yes 31409986
chr1 109677313 109677327 IRF7 JASPAR yes 118346407
chr1 109677313 109677327 IRF8 JASPAR yes 118346408
SNP sites on vista2840[chr1:109677264-109677321]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 109677269 rs3738781 C T
BHLHE40 EP300 GABPA GATA1 GATA2 NR2F2 PML POLR2A STAT5A TAL1 TEAD4
544861
chr1 109677309 rs3738782 G A
BHLHE40 EP300 GABPA GATA1 GATA2 IRF1 IRF2 PML POLR2A TAL1 TEAD4
544862
Genes possibly regulated by vista2840[chr1:109677264-109677321]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 109512836 109584850 - WDR47 ENSG00000085433.11 109584850 0.73 0.99 966 7586
chr1 109605108 109618624 - TAF13 ENSG00000197780.5 109618624 0.69 0.99 967 41360
chr1 109632425 109639556 + TMEM167B ENSG00000215717.5 109632425 0.62 0.99 968 55161
chr1 109648573 109656479 - C1orf194 ENSG00000179902.8 109656479 0.92 1.0 969 79215
chr1 109656301 109749401 + KIAA1324 ENSG00000116299.12 109656301 0.93 0.95 970 79037
chr1 109756540 109780791 + SARS ENSG00000031698.8 109756540 0.61 1.0 971 20781
Expression level of Genes
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miRNAs possibly regulated by vista2840[chr1:109677264-109677321]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results