EnhancerDB
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  3. vista28401[chr19:5880679-5880918]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28401[chr19:5880679-5880918]
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Tissue distribution of vista28401
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Transcription factor that possibly regulate vista28401[chr19:5880679-5880918]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 5880519 5880909 EP300 UCSC Txn Factor no Conserved 108376023
chr19 5880620 5880879 FOXA1 UCSC Txn Factor no Conserved 108376044
chr19 5880663 5880683 TP63 JASPAR yes 70792794
chr19 5880663 5880683 TP63 JASPAR yes 112244620
chr19 5880665 5880680 TP53 JASPAR yes 70792795
chr19 5880665 5880680 TP53 JASPAR yes 112244621
chr19 5880704 5880715 FOXA1 JASPAR yes 70792796
chr19 5880704 5880715 FOXH1 JASPAR yes 70792797
chr19 5880704 5880715 FOXA1 JASPAR yes 112244622
chr19 5880704 5880715 FOXH1 JASPAR yes 112244623
chr19 5880704 5880719 FOXA1 JASPAR yes 70792798
chr19 5880704 5880719 FOXA1 JASPAR yes 112244624
chr19 5880706 5880717 FOXP2 JASPAR yes 70792799
chr19 5880706 5880717 FOXP2 JASPAR yes 112244625
chr19 5880723 5880738 NR2C2 JASPAR yes 70792800
chr19 5880723 5880738 NR2C2 JASPAR yes 112244626
chr19 5880730 5880751 ZNF263 JASPAR yes 70792801
chr19 5880730 5880751 ZNF263 JASPAR yes 112244627
chr19 5880731 5880752 ZNF263 JASPAR yes 70792802
chr19 5880731 5880752 ZNF263 JASPAR yes 112244628
chr19 5880732 5880744 INSM1 JASPAR yes 70792803
chr19 5880732 5880744 INSM1 JASPAR yes 112244629
chr19 5880737 5880747 SP1 JASPAR yes 70792804
chr19 5880737 5880747 SP1 JASPAR yes 112244630
chr19 5880740 5880745 SP1 TRANSFAC yes 70792805
chr19 5880740 5880745 SP1 TRANSFAC yes 112244631
chr19 5880741 5880751 ZNF740 JASPAR yes 70792806
chr19 5880741 5880751 ZNF740 JASPAR yes 112244632
chr19 5880745 5880760 AR JASPAR yes 70792807
chr19 5880745 5880760 AR JASPAR yes 112244633
chr19 5880745 5880762 NR3C1 JASPAR yes 70792808
chr19 5880745 5880762 NR3C2 JASPAR yes 70792809
chr19 5880745 5880762 NR3C1 JASPAR yes 112244634
chr19 5880745 5880762 NR3C2 JASPAR yes 112244635
chr19 5880748 5880763 LEF1 JASPAR yes 70792810
chr19 5880748 5880763 LEF1 JASPAR yes 112244636
chr19 5880749 5880763 TCF7L2 JASPAR yes 70792811
chr19 5880749 5880763 TCF7L2 JASPAR yes 112244637
chr19 5880760 5880774 PAX6 JASPAR yes 70792812
chr19 5880760 5880774 PAX6 JASPAR yes 112244638
chr19 5880760 5880779 PAX5 JASPAR yes 70792813
chr19 5880760 5880779 PAX5 JASPAR yes 112244639
chr19 5880771 5880791 TP53 JASPAR yes 70792814
chr19 5880771 5880791 TP53 JASPAR yes 112244640
chr19 5880772 5880777 TFAP2A TRANSFAC yes 70792815
chr19 5880772 5880777 TFAP2A TRANSFAC yes 112244641
chr19 5880772 5880778 MZF1 JASPAR yes 70792816
chr19 5880772 5880778 MZF1 JASPAR yes 112244642
chr19 5880792 5880797 SP1 TRANSFAC yes 70792817
chr19 5880792 5880797 SP1 TRANSFAC yes 112244643
chr19 5880795 5880814 CTCF JASPAR yes 70792818
chr19 5880795 5880814 CTCF JASPAR yes 112244644
chr19 5880796 5880808 INSM1 JASPAR yes 70792819
chr19 5880796 5880808 INSM1 JASPAR yes 112244645
chr19 5880814 5880829 MEF2C JASPAR yes 70792820
chr19 5880814 5880829 MEF2C JASPAR yes 112244646
chr19 5880815 5880830 MEF2A JASPAR yes 70792821
chr19 5880815 5880830 MEF2A JASPAR yes 112244647
chr19 5880816 5880828 MEF2A JASPAR yes 70792822
chr19 5880816 5880828 MEF2B JASPAR yes 70792823
chr19 5880816 5880828 MEF2D JASPAR yes 70792824
chr19 5880816 5880828 MEF2A JASPAR yes 112244648
chr19 5880816 5880828 MEF2B JASPAR yes 112244649
chr19 5880816 5880828 MEF2D JASPAR yes 112244650
chr19 5880817 5880827 MEF2A JASPAR yes 70792825
chr19 5880817 5880827 MEF2A JASPAR yes 112244651
chr19 5880824 5880827 MYB TRANSFAC yes 70792826
chr19 5880824 5880827 MYB TRANSFAC yes 112244652
chr19 5880829 5880850 ZNF263 JASPAR yes 70792827
chr19 5880829 5880850 ZNF263 JASPAR yes 112244653
chr19 5880831 5880842 ELF5 JASPAR yes 70792828
chr19 5880831 5880842 ELF5 JASPAR yes 112244654
chr19 5880832 5880843 E2F4 JASPAR yes 70792829
chr19 5880832 5880843 E2F6 JASPAR yes 70792830
chr19 5880832 5880843 E2F4 JASPAR yes 112244655
chr19 5880832 5880843 E2F6 JASPAR yes 112244656
chr19 5880833 5880844 E2F1 JASPAR yes 70792831
chr19 5880833 5880844 E2F1 JASPAR yes 112244657
chr19 5880845 5880851 SP1 TRANSFAC yes 70792832
chr19 5880845 5880851 SP1 TRANSFAC yes 112244658
chr19 5880845 5880855 SP1 JASPAR yes 70792833
chr19 5880845 5880855 SP1 JASPAR yes 112244659
chr19 5880845 5880860 ZIC3 JASPAR yes 70792834
chr19 5880845 5880860 ZIC3 JASPAR yes 112244660
chr19 5880846 5880861 TFAP2C JASPAR yes 70792835
chr19 5880846 5880861 TFAP2C JASPAR yes 112244661
chr19 5880849 5880860 EBF1 JASPAR yes 70792836
chr19 5880849 5880860 EBF1 JASPAR yes 112244662
chr19 5880850 5880862 TFAP2A JASPAR yes 70792837
chr19 5880850 5880862 TFAP2A JASPAR yes 112244663
chr19 5880861 5880872 E2F6 JASPAR yes 70792838
chr19 5880861 5880872 E2F6 JASPAR yes 112244664
chr19 5880866 5880876 SP1 JASPAR yes 70792839
chr19 5880866 5880876 SP1 JASPAR yes 112244665
chr19 5880873 5880878 SP1 TRANSFAC yes 70792840
chr19 5880873 5880878 SP1 TRANSFAC yes 112244666
chr19 5880879 5880887 YY1 TRANSFAC yes 70792841
chr19 5880879 5880887 YY1 TRANSFAC yes 112244667
chr19 5880882 5880888 YY1 JASPAR yes 70792842
chr19 5880882 5880888 YY1 JASPAR yes 112244668
chr19 5880912 5880918 SOX10 JASPAR yes 70792843
chr19 5880912 5880918 SOX10 JASPAR yes 112244669
SNP sites on vista28401[chr19:5880679-5880918]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 5880694 rs531408977 C T
EP300 FOXA1
5411240
Genes possibly regulated by vista28401[chr19:5880679-5880918]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 5782971 5784776 - PRR22 ENSG00000212123.3 5784776 0.73 1.0 16866 4097
chr19 5784016 5785630 - CTB-54O9.9 ENSG00000267157.1 5785630 0.9 0.87 16867 4951
chr19 5784843 5791249 - DUS3L ENSG00000141994.11 5791249 0.54 1.0 16868 10570
chr19 5823813 5828335 + NRTN ENSG00000171119.2 5823813 0.82 1.0 16869 43134
chr19 5830621 5839742 - FUT6 ENSG00000156413.9 5839742 0.97 0.98 16870 59063
chr19 5842899 5851485 - FUT3 ENSG00000171124.8 5851485 0.94 1.0 16871 70806
chr19 5865837 5903798 - FUT5 ENSG00000130383.6 5903798 0.91 0.99 16872 77120
chr19 5866182 5903798 - AC024592.12 ENSG00000267740.1 5903798 0.85 0.85 16873 77120
chr19 5891287 5904017 - NDUFA11 ENSG00000174886.8 5904017 0.83 0.96 16874 76901
chr19 5904852 5914718 + AC104532.2 ENSG00000267314.1 5904852 0.89 0.95 16875 76066
chr19 5904869 5910864 + VMAC ENSG00000187650.3 5904869 0.67 0.98 16876 76049
chr19 5911718 5915888 + CAPS ENSG00000105519.8 5911718 0.82 0.98 16877 69200
chr19 5916150 5978153 - RANBP3 ENSG00000031823.10 5978153 0.53 1.0 16878 2765
Expression level of Genes
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miRNAs possibly regulated by vista28401[chr19:5880679-5880918]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results