EnhancerDB
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  3. vista28405[chr19:5966194-5966581]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28405[chr19:5966194-5966581]
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Tissue distribution of vista28405
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Transcription factor that possibly regulate vista28405[chr19:5966194-5966581]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 5966367 5966587 CEBPB UCSC Txn Factor no Conserved 108376106
chr19 5966202 5966206 NFE TRANSFAC yes 70792942
chr19 5966202 5966206 NFE TRANSFAC yes 112249327
chr19 5966206 5966211 MYC TRANSFAC yes 70792943
chr19 5966206 5966211 MYC TRANSFAC yes 112249328
chr19 5966219 5966224 GATA2 JASPAR yes 70792944
chr19 5966219 5966224 GATA2 JASPAR yes 112249329
chr19 5966267 5966279 ELF4 JASPAR yes 70792945
chr19 5966267 5966279 ELF4 JASPAR yes 112249330
chr19 5966276 5966280 ESR1 TRANSFAC yes 70792946
chr19 5966276 5966280 ESR1 TRANSFAC yes 112249331
chr19 5966276 5966291 PRDM1 JASPAR yes 70792947
chr19 5966276 5966291 PRDM1 JASPAR yes 112249332
chr19 5966294 5966307 NR2F1 JASPAR yes 70792948
chr19 5966294 5966307 NR2F1 JASPAR yes 112249333
chr19 5966298 5966302 ESR1 TRANSFAC yes 70792949
chr19 5966298 5966302 ESR1 TRANSFAC yes 112249334
chr19 5966298 5966309 USF1 JASPAR yes 70792950
chr19 5966298 5966309 USF2 JASPAR yes 70792951
chr19 5966298 5966309 USF1 JASPAR yes 112249335
chr19 5966298 5966309 USF2 JASPAR yes 112249336
chr19 5966299 5966309 BHLHE41 JASPAR yes 70792952
chr19 5966299 5966309 SREBF2 JASPAR yes 70792953
chr19 5966299 5966309 TFE3 JASPAR yes 70792954
chr19 5966299 5966309 TFEB JASPAR yes 70792955
chr19 5966299 5966309 TFEC JASPAR yes 70792956
chr19 5966299 5966309 BHLHE41 JASPAR yes 112249337
chr19 5966299 5966309 SREBF2 JASPAR yes 112249338
chr19 5966299 5966309 TFE3 JASPAR yes 112249339
chr19 5966299 5966309 TFEB JASPAR yes 112249340
chr19 5966299 5966309 TFEC JASPAR yes 112249341
chr19 5966299 5966310 USF1 JASPAR yes 70792957
chr19 5966299 5966310 USF1 JASPAR yes 112249342
chr19 5966307 5966317 FIGLA JASPAR yes 70792958
chr19 5966307 5966317 TCF3 JASPAR yes 70792959
chr19 5966307 5966317 FIGLA JASPAR yes 112249343
chr19 5966307 5966317 TCF3 JASPAR yes 112249344
chr19 5966308 5966317 SNAI2 JASPAR yes 70792960
chr19 5966308 5966317 SNAI2 JASPAR yes 112249345
chr19 5966309 5966314 USF2 TRANSFAC yes 70792961
chr19 5966309 5966314 USF2 TRANSFAC yes 112249346
chr19 5966338 5966343 GATA2 JASPAR yes 70792962
chr19 5966338 5966343 GATA2 JASPAR yes 112249347
chr19 5966342 5966346 H1TF2 TRANSFAC yes 70792963
chr19 5966342 5966346 NFE TRANSFAC yes 70792964
chr19 5966342 5966346 SRF TRANSFAC yes 70792965
chr19 5966342 5966346 H1TF2 TRANSFAC yes 112249348
chr19 5966342 5966346 NFE TRANSFAC yes 112249349
chr19 5966342 5966346 SRF TRANSFAC yes 112249350
chr19 5966361 5966377 SOX4 JASPAR yes 70792966
chr19 5966361 5966377 SOX4 JASPAR yes 112249351
chr19 5966391 5966405 TCF7L2 JASPAR yes 70792967
chr19 5966391 5966405 TCF7L2 JASPAR yes 112249352
chr19 5966391 5966406 LEF1 JASPAR yes 70792968
chr19 5966391 5966406 LEF1 JASPAR yes 112249353
chr19 5966403 5966413 TEAD1 JASPAR yes 70792969
chr19 5966403 5966413 TEAD4 JASPAR yes 70792970
chr19 5966403 5966413 TEAD1 JASPAR yes 112249354
chr19 5966403 5966413 TEAD4 JASPAR yes 112249355
chr19 5966403 5966415 TEAD1 JASPAR yes 70792971
chr19 5966403 5966415 TEAD1 JASPAR yes 112249356
chr19 5966404 5966412 TEAD3 JASPAR yes 70792972
chr19 5966404 5966412 TEAD3 JASPAR yes 112249357
chr19 5966436 5966457 IRF1 JASPAR yes 70792973
chr19 5966436 5966457 IRF1 JASPAR yes 112249358
chr19 5966445 5966449 NFE TRANSFAC yes 70792974
chr19 5966445 5966449 NFE TRANSFAC yes 112249359
chr19 5966454 5966462 MEIS2 JASPAR yes 70792975
chr19 5966454 5966462 MEIS2 JASPAR yes 112249360
chr19 5966455 5966459 NFE TRANSFAC yes 70792976
chr19 5966455 5966459 NFE TRANSFAC yes 112249361
chr19 5966455 5966462 MEIS1 JASPAR yes 70792977
chr19 5966455 5966462 MEIS1 JASPAR yes 112249362
chr19 5966470 5966482 TEAD1 JASPAR yes 70792978
chr19 5966470 5966482 TEAD1 JASPAR yes 112249363
chr19 5966472 5966482 TEAD4 JASPAR yes 70792979
chr19 5966472 5966482 TEAD4 JASPAR yes 112249364
chr19 5966473 5966481 TEAD3 JASPAR yes 70792980
chr19 5966473 5966481 TEAD3 JASPAR yes 112249365
chr19 5966480 5966492 HLF JASPAR yes 70792981
chr19 5966480 5966492 HLF JASPAR yes 112249366
chr19 5966481 5966491 CEBPG JASPAR yes 70792982
chr19 5966481 5966491 CEBPG JASPAR yes 112249367
chr19 5966485 5966499 POU4F1 JASPAR yes 70792983
chr19 5966485 5966499 POU4F1 JASPAR yes 112249368
chr19 5966525 5966546 ZNF263 JASPAR yes 70792984
chr19 5966525 5966546 ZNF263 JASPAR yes 112249369
chr19 5966529 5966537 SP1 TRANSFAC yes 70792985
chr19 5966529 5966537 SP1 TRANSFAC yes 112249370
chr19 5966544 5966550 ETS1 JASPAR yes 70792986
chr19 5966544 5966550 SPI1 JASPAR yes 70792987
chr19 5966544 5966550 ETS1 JASPAR yes 112249371
chr19 5966544 5966550 SPI1 JASPAR yes 112249372
chr19 5966550 5966554 TEAD2 TRANSFAC yes 70792988
chr19 5966550 5966554 TEAD2 TRANSFAC yes 112249373
chr19 5966550 5966555 TBP TRANSFAC yes 70792989
chr19 5966550 5966555 TBP TRANSFAC yes 112249374
chr19 5966577 5966593 POU4F3 JASPAR yes 70792990
chr19 5966577 5966593 POU4F3 JASPAR yes 112249375
SNP sites on vista28405[chr19:5966194-5966581]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 5966232 rs113774422 A G no 5411750
chr19 5966358 rs555836 C T no 5411751
Genes possibly regulated by vista28405[chr19:5966194-5966581]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 5865837 5903798 - FUT5 ENSG00000130383.6 5903798 0.91 0.99 16872 37604
chr19 5866182 5903798 - AC024592.12 ENSG00000267740.1 5903798 0.85 0.85 16873 37604
chr19 5891287 5904017 - NDUFA11 ENSG00000174886.8 5904017 0.83 0.96 16874 37823
chr19 5904852 5914718 + AC104532.2 ENSG00000267314.1 5904852 0.89 0.95 16875 38658
chr19 5904869 5910864 + VMAC ENSG00000187650.3 5904869 0.67 0.98 16876 38675
chr19 5911718 5915888 + CAPS ENSG00000105519.8 5911718 0.82 0.98 16877 45524
chr19 5916150 5978153 - RANBP3 ENSG00000031823.10 5978153 0.53 1.0 16878 88428
Expression level of Genes
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miRNAs possibly regulated by vista28405[chr19:5966194-5966581]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results