EnhancerDB
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  3. vista28406[chr19:5968077-5968307]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28406[chr19:5968077-5968307]
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Tissue distribution of vista28406
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Transcription factor that possibly regulate vista28406[chr19:5968077-5968307]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 5967953 5968301 CTCF UCSC Txn Factor no Conserved 108376252
chr19 5967991 5968255 RAD21 UCSC Txn Factor no Conserved 108376266
chr19 5968105 5968422 MAFK UCSC Txn Factor no Conserved 108376313
chr19 5968126 5968406 MAFF UCSC Txn Factor no Conserved 108376317
chr19 5968088 5968091 MYB TRANSFAC yes 70792991
chr19 5968088 5968091 MYB TRANSFAC yes 112249523
chr19 5968106 5968125 CTCF JASPAR yes 70792992
chr19 5968106 5968125 CTCF JASPAR yes 112249524
chr19 5968116 5968126 SREBF1 JASPAR yes 70792993
chr19 5968116 5968126 SREBF2 JASPAR yes 70792994
chr19 5968116 5968126 SREBF1 JASPAR yes 112249525
chr19 5968116 5968126 SREBF2 JASPAR yes 112249526
chr19 5968117 5968125 MGA JASPAR yes 70792995
chr19 5968117 5968125 MGA JASPAR yes 112249527
chr19 5968130 5968142 NHLH1 JASPAR yes 70792996
chr19 5968130 5968142 NHLH1 JASPAR yes 112249528
chr19 5968131 5968141 NHLH1 JASPAR yes 70792997
chr19 5968131 5968141 TFAP4 JASPAR yes 70792998
chr19 5968131 5968141 NHLH1 JASPAR yes 112249529
chr19 5968131 5968141 TFAP4 JASPAR yes 112249530
chr19 5968134 5968147 ATF4 JASPAR yes 70792999
chr19 5968134 5968147 ATF4 JASPAR yes 112249531
chr19 5968158 5968171 HSF1 JASPAR yes 70793000
chr19 5968158 5968171 HSF2 JASPAR yes 70793001
chr19 5968158 5968171 HSF4 JASPAR yes 70793002
chr19 5968158 5968171 HSF1 JASPAR yes 112249532
chr19 5968158 5968171 HSF2 JASPAR yes 112249533
chr19 5968158 5968171 HSF4 JASPAR yes 112249534
chr19 5968162 5968177 HSF1 JASPAR yes 70793003
chr19 5968162 5968177 HSF1 JASPAR yes 112249535
chr19 5968163 5968176 HSF1 JASPAR yes 70793004
chr19 5968163 5968176 HSF4 JASPAR yes 70793005
chr19 5968163 5968176 HSF1 JASPAR yes 112249536
chr19 5968163 5968176 HSF4 JASPAR yes 112249537
chr19 5968166 5968177 NFKB1 JASPAR yes 70793006
chr19 5968166 5968177 NFKB1 JASPAR yes 112249538
chr19 5968167 5968177 NFKB1 JASPAR yes 70793007
chr19 5968167 5968177 NFKB1 JASPAR yes 112249539
chr19 5968167 5968182 HSF1 JASPAR yes 70793008
chr19 5968167 5968182 HSF1 JASPAR yes 112249540
chr19 5968168 5968181 HSF1 JASPAR yes 70793009
chr19 5968168 5968181 HSF2 JASPAR yes 70793010
chr19 5968168 5968181 HSF4 JASPAR yes 70793011
chr19 5968168 5968181 HSF1 JASPAR yes 112249541
chr19 5968168 5968181 HSF2 JASPAR yes 112249542
chr19 5968168 5968181 HSF4 JASPAR yes 112249543
chr19 5968189 5968199 NFKB1 JASPAR yes 70793012
chr19 5968189 5968199 NFKB1 JASPAR yes 112249544
chr19 5968195 5968201 SP1 TRANSFAC yes 70793013
chr19 5968195 5968201 SP1 TRANSFAC yes 112249545
chr19 5968195 5968205 SP1 JASPAR yes 70793014
chr19 5968195 5968205 SP1 JASPAR yes 112249546
chr19 5968206 5968218 EHF JASPAR yes 70793015
chr19 5968206 5968218 ELF1 JASPAR yes 70793016
chr19 5968206 5968218 EHF JASPAR yes 112249547
chr19 5968206 5968218 ELF1 JASPAR yes 112249548
chr19 5968206 5968219 ELF3 JASPAR yes 70793017
chr19 5968206 5968219 ELF3 JASPAR yes 112249549
chr19 5968207 5968218 ELF5 JASPAR yes 70793018
chr19 5968207 5968218 ELF5 JASPAR yes 112249550
chr19 5968210 5968216 ETS1 JASPAR yes 70793019
chr19 5968210 5968216 SPI1 JASPAR yes 70793020
chr19 5968210 5968216 ETS1 JASPAR yes 112249551
chr19 5968210 5968216 SPI1 JASPAR yes 112249552
chr19 5968214 5968229 STAT1 JASPAR yes 70793021
chr19 5968214 5968229 STAT1 JASPAR yes 112249553
chr19 5968216 5968227 STAT1 JASPAR yes 70793022
chr19 5968216 5968227 STAT1 JASPAR yes 112249554
chr19 5968219 5968230 FLI1 JASPAR yes 70793023
chr19 5968219 5968230 FLI1 JASPAR yes 112249555
chr19 5968220 5968228 EHF JASPAR yes 70793024
chr19 5968220 5968228 EHF JASPAR yes 112249556
chr19 5968224 5968229 ETS2 TRANSFAC yes 70793025
chr19 5968224 5968229 ETS2 TRANSFAC yes 112249557
chr19 5968224 5968232 FEV JASPAR yes 70793026
chr19 5968224 5968232 FEV JASPAR yes 112249558
chr19 5968226 5968236 RELA JASPAR yes 70793027
chr19 5968226 5968236 RELA JASPAR yes 112249559
chr19 5968245 5968263 MAFF JASPAR yes 70793028
chr19 5968245 5968263 MAFF JASPAR yes 112249560
chr19 5968247 5968258 NRL JASPAR yes 70793029
chr19 5968247 5968258 NRL JASPAR yes 112249561
chr19 5968247 5968262 MAFK JASPAR yes 70793030
chr19 5968247 5968262 MAFK JASPAR yes 112249562
chr19 5968247 5968268 MAFG JASPAR yes 70793031
chr19 5968247 5968268 MAFG JASPAR yes 112249563
chr19 5968254 5968273 PAX5 JASPAR yes 70793032
chr19 5968254 5968273 PAX5 JASPAR yes 112249564
chr19 5968267 5968285 MAFF JASPAR yes 70793033
chr19 5968267 5968285 MAFF JASPAR yes 112249565
chr19 5968269 5968284 MAFK JASPAR yes 70793034
chr19 5968269 5968284 MAFK JASPAR yes 112249566
chr19 5968302 5968308 SOX10 JASPAR yes 70793035
chr19 5968302 5968308 SOX10 JASPAR yes 112249567
chr19 5968306 5968326 TP63 JASPAR yes 70793036
chr19 5968306 5968326 TP63 JASPAR yes 112249568
SNP sites on vista28406[chr19:5968077-5968307]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28406[chr19:5968077-5968307]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 5865837 5903798 - FUT5 ENSG00000130383.6 5903798 0.91 0.99 16872 35721
chr19 5866182 5903798 - AC024592.12 ENSG00000267740.1 5903798 0.85 0.85 16873 35721
chr19 5891287 5904017 - NDUFA11 ENSG00000174886.8 5904017 0.83 0.96 16874 35940
chr19 5904852 5914718 + AC104532.2 ENSG00000267314.1 5904852 0.89 0.95 16875 36775
chr19 5904869 5910864 + VMAC ENSG00000187650.3 5904869 0.67 0.98 16876 36792
chr19 5911718 5915888 + CAPS ENSG00000105519.8 5911718 0.82 0.98 16877 43641
chr19 5916150 5978153 - RANBP3 ENSG00000031823.10 5978153 0.53 1.0 16878 90154
Expression level of Genes
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miRNAs possibly regulated by vista28406[chr19:5968077-5968307]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results