EnhancerDB
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  3. vista28407[chr19:5968660-5968756]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28407[chr19:5968660-5968756]
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Tissue distribution of vista28407
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Transcription factor that possibly regulate vista28407[chr19:5968660-5968756]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 5968687 5968699 NHLH1 JASPAR yes 70793037
chr19 5968687 5968699 NHLH1 JASPAR yes 112249617
chr19 5968698 5968706 TEAD3 JASPAR yes 70793038
chr19 5968698 5968706 TEAD3 JASPAR yes 112249618
chr19 5968716 5968729 NR2F1 JASPAR yes 70793039
chr19 5968716 5968729 NR2F1 JASPAR yes 112249619
chr19 5968717 5968725 CREB1 JASPAR yes 70793040
chr19 5968717 5968725 CREB1 JASPAR yes 112249620
chr19 5968718 5968726 NR4A2 JASPAR yes 70793041
chr19 5968718 5968726 NR4A2 JASPAR yes 112249621
chr19 5968720 5968724 ESR1 TRANSFAC yes 70793042
chr19 5968720 5968724 ESR1 TRANSFAC yes 112249622
chr19 5968723 5968734 ETV2 JASPAR yes 70793043
chr19 5968723 5968734 ETV2 JASPAR yes 112249623
chr19 5968724 5968734 ETS1 JASPAR yes 70793044
chr19 5968724 5968734 ETS1 JASPAR yes 112249624
chr19 5968724 5968735 FLI1 JASPAR yes 70793045
chr19 5968724 5968735 FLI1 JASPAR yes 112249625
chr19 5968726 5968739 SCRT2 JASPAR yes 70793046
chr19 5968726 5968739 SCRT2 JASPAR yes 112249626
chr19 5968726 5968741 SCRT1 JASPAR yes 70793047
chr19 5968726 5968741 SCRT1 JASPAR yes 112249627
chr19 5968730 5968739 SNAI2 JASPAR yes 70793048
chr19 5968730 5968739 SNAI2 JASPAR yes 112249628
chr19 5968730 5968740 FIGLA JASPAR yes 70793049
chr19 5968730 5968740 TCF3 JASPAR yes 70793050
chr19 5968730 5968740 TCF4 JASPAR yes 70793051
chr19 5968730 5968740 FIGLA JASPAR yes 112249629
chr19 5968730 5968740 TCF3 JASPAR yes 112249630
chr19 5968730 5968740 TCF4 JASPAR yes 112249631
chr19 5968732 5968741 ZEB1 JASPAR yes 70793052
chr19 5968732 5968741 ZEB1 JASPAR yes 112249632
chr19 5968733 5968741 TBX15 JASPAR yes 70793053
chr19 5968733 5968741 TBX15 JASPAR yes 112249633
chr19 5968734 5968739 SP1 TRANSFAC yes 70793054
chr19 5968734 5968739 SP1 TRANSFAC yes 112249634
SNP sites on vista28407[chr19:5968660-5968756]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 5968688 rs11085155 G A
NHLH1
5411776
chr19 5968692 rs541811045 A C
NHLH1
5411777
Genes possibly regulated by vista28407[chr19:5968660-5968756]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 5865837 5903798 - FUT5 ENSG00000130383.6 5903798 0.91 0.99 16872 35138
chr19 5866182 5903798 - AC024592.12 ENSG00000267740.1 5903798 0.85 0.85 16873 35138
chr19 5891287 5904017 - NDUFA11 ENSG00000174886.8 5904017 0.83 0.96 16874 35357
chr19 5904852 5914718 + AC104532.2 ENSG00000267314.1 5904852 0.89 0.95 16875 36192
chr19 5904869 5910864 + VMAC ENSG00000187650.3 5904869 0.67 0.98 16876 36209
chr19 5911718 5915888 + CAPS ENSG00000105519.8 5911718 0.82 0.98 16877 43058
chr19 5916150 5978153 - RANBP3 ENSG00000031823.10 5978153 0.53 1.0 16878 90603
Expression level of Genes
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miRNAs possibly regulated by vista28407[chr19:5968660-5968756]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results